LOC110491857 (LOC106566940)


Basic Information

Item Value
gene id LOC110491857
gene name LOC106566940
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 34810182 ~ 34830816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036946750.1
ttgtttcttattcAATACCCCGTCCagctggtggcggtaatgcaccgttaacgttggatgccaaccgccgttaaacccGATCGAAGAAGAACCACAAACAGCGGAGCAGGGAGAGAGGTCGTTCCTGCGGAGGTAACCATGGCAATGACGGGCCAGAGTTCCTGCTCCTCGATGAGTAATCACACCAAGGAACGTGTGACCATGGCCAAGGTGACCCTGGAGAACTTCTACAGCAACCTCATCGCTCaacatgaggagagagagatgaggcagcagaagtTGGAAAAGGTGATGGATCAAGAGGGCTTGGCTGATGAAGAGAAGCGTATCCGGCGCTCCCAGCACGCCAGGAAAGAGACTGAGTTCCTGCGTCTCAAACGAACCCGCCTGGGGCTGGAGGACTTCGAGTCCCTCAAGGTGATTGGCCGAGGAGCTTTCGGAGAGGTGCGTCTGGTGCAGAAGAAGGACACAGGTCACGTGTACGCTATGAAGATCCTCCGCAAGGCCGACATGCTGGAGAAGgagcagGTGGGCCACATCCGTGCTGAGAGGGACATCTTGGTAGAGGCTGACAGTCTGTGGGTGGTTAAGATGTTCTACAGCTTCCAGGACAAGATGAACCTCTACCTCATCATGGAGTTCCTGCCTGGCGGTGACATGATGACCCTGCTAATGAAGAAGGATACTCTGACAGAGGAGGCCAGTCAGTTCTACATCGCTGAGACAGTGCTAGCCATCGACTCCATCCACCAGTTGGGCTTCATTCACAGAGACATCAAACCTGACAACCTGCTACTGGACTCCAGGGGCCATGTGAAGCTGTCTGACTTTGGTCTTTGCACAGGTCTGAAAAGGGCGCATCGTACCGAGTTCTACAAGAACCTGAATCATAGCCTCCCCAGTGACTTCAGTAAGCAAACATTCAATAACATGAACTCAAAGAGGAAAGCAGAGACGTGGAAGAGGAACCGGAGACAGCTGgccttCTCTACTGTGGGCACCCCTGACTACATCGCCCCTGAAGTCTTCATGCAGAACGGATACAACAAGCTCTGTGATTGGTGGAGCCTTGGAGTCATCATGTATGAGATGCTGATAGGCTATCCCCCGTTCTGCTCAGAGACCCCCCAGGAGACCTACAGGAAGGTGATGAACTGGCAAGAAACACTGACTTTTCCCCCTGAAGTGCCCATTTCGGAGAAAGCTAAGGACCTCATCCTCAGGTTCTGCTGTGAGGAGGAGCACAGGATCGGAGCCACTGGAGTGGAGGACATTAAGGGCAACGCCTTCTTCGAGGGGGTGGACTACGACCACATCAGAGAGCGACCCGCTGCCATTCCCATTGAGATCAAAAGCATCGACGACACATCCAACTTTGACGAGTTCCCAGACTCTGATATCCTCCAGCCAACAGCTGCCCCTGTGGTGTCCAACCATTCTGAGGCAGACCTCAAGAACAAGGACTGGGTCTTCATCAACTACACCTACAAGCGCTTTGAAGGCCTCACAGCCCGAGGGGCTATCCCCTCCTACATGAAGACGGGGAAGAGATGAATCCTTCCTTTGTTTCCTCACTCACTCTACCTGCCCCTCAGACTGGCATTCAAATGGGATTCCCCATGGATCCCAACGTCCACTCCTCTCCCAAACTCCATTTTGGAGGTAGAAACTAAATGACCCTATTCAAGCTTGTTGAAGAGGTCCATCATAATTGAGACTATCCCATGTGTCTGATCCTGCTGAAGGGACCTTTCTCCTTCCTTTGCAGGGGACTTGTAGGGCTCTGTGTACTGTGTAGAGAAGTGTGACCTACTCCAACTCGAGTTTGTCTATCTAAAAAAGCCATAGCGTTGTGCTGGAAGGTATGGACAGTGATTGTTTTCTATGTGAAAACTCACATGCCATTCCACCCCTGGATTAAAGTTCCCAGTGTAGCAGTCTTGGAGGTGTTGATATGACCTTAGTTTGGGGACCATCTCTCGTAGATCTCCACTAGCATCGGTCCAACTCGGCCAAGACTGATTCTCTATCCTTTAGTATCCCAAGGGACTGAACCAAGATACCAGCATAACCGGTCACCTTAGGGGCCAGAGCCCATTTTCACATCAGAAGAACACACTTGACTGGCTATACCAGCCTTCTTCACTTCTTCCTCCACAAACAGACATTGAAGTCTTAAAGTTTAGCTGGGTGACCACCAGCATGGGACTAGGATCCAATATGCCTCACTTTTCTGTCAAAGGGCTAGCTTTTCTCTCTTCAGTTTCTTTCTTTTTTCCACACACAATAGAATTCCATCTTTTTAGAAATGAGTTCCGCCGTTAAAAACATTAGAAATAGTGTAATTTGACGAACTAATGATGCTTTTCAGGGAATATATGTcaatgtttttcatgtgtttttaGAGGGCTCTCTACTGAAGCATCTTGGATGATGGTGTTTCGGACCGGTTGCCTGTTGCAACAAGGCAACTCATAACCAAAAACAATGAGAGCTGAGAGTAATTGTTGTAACTATTCAGTCTAATTTGAGGGTTTCAATGGAATTGCTTTGTCTCCATTTAATTGTCACTTCCCTACTGCCAATGGTGGAGCTGTTACATGGACTTTGGCAAGTGTTTATAGCAATAGAATCGCCTCTCTTGAATATGATTCTATTTGAAATGGAACTACCCCTTCCAGAAGCCCACCTTTTTAGGTTCTTAGTTTGACAATCATCCACTGTTAATATTAGCAACTTCATGCTCTCCTTCAACTCATTTGATTTACCAATACTCGTGGATATGCATGTCCTTTAGATAGAGagcaaaatcaaatacaaaaatatgttGAATGTACTGATTGAATGCTAAAATTTGGAGCATGTACCAACCATTATTTATGGTACTTTTCCATGGACCTTTGGGGTAGGGGAGCTATAAGTAAGGCCAAGATATTGATACTCTtatctttccttctctttttttGTCCTGACCACTGGTCGTTAAGGGCTTGGTAGGTGAGGTGGCAGAGCAAGTTTGTTCAGCGAATATGTAAGTAACAGAATAGAAAAGGAGCAGCATTTAGAGTATTGAGACACACTCAGGCTCTGTGACCCTAGGTTAGGGTCATTAACACACCCTTTCCACTTCCTGTCGTATCTATAGTTCTGTCTCTTCCTGTTGCTTGACTATTTCTTAGCAAGAATACTTTAAACATTACATTTGTCTGACGTTTTGTGTCAAGGATATGCCACCTGGTATGTCCTTACTTTTCAAGAGGCTAAGAGGTGTGAGTGAGAAACTCGACCTTAACTCTGTAAACAGGGCTATATGTGACTCACTGTTCTTAACACAATCCCAAATGCTGTCATTTGAATCGAATGTAATCCCAAGGTGTAGTTGAAGATGAATTTAATGccatgttgattccaaaatgCTGTAATTTGAATGGAATGTAGCCTAAACCACAGGAGTGGTAGGTTTGTCACACGTTGAAGATGTCTGGTATTTTGTTAAATATCTGTACGGTGTTCTGGGTAGTTCAGACTACTTGCTGAGATTTAATATCCAGACTTTTTTTTGTAGTTTTTACGACTGAGCGACAGAactgattttgagactggtctcacCTTTTACTGATGCTCGGTGCCCGAATGAACCTGTTGTAATGCCGGGTTGAAAAAGTATTGGGCGGATGACTTGGCAAAGTGCGAATaacgttttggaatatttgtattttaaATGTATGCTGCTTGGTGTGTGAGATTTGCATGTCTTTAGAGGATTGGGTGATGTGCTCAGTAAAAATAAGATGCTGGAATATGTAGTGCTCGATTAACCAACACTGATAAGGTGGGTGCTCTTTTGTAGATGTCATCcaactgtgtgtgtctgctgttATTTCCCCCAGGCACACAAGGTGTGGGAAACAGGATGTACAAACCTTTTTATAGGGAACATTCAATCAAAAGTAGGGGGAGTTGTATTTAATCCACTGTGGTGTGGGGTTTCTATTGTATATTTTCTGCCATTTCACATTGAATAACTGCACTTAATGTCTGTGGTGTTTCCGTTTGTACAGCAAAATAATGGGCCGCTCTGAAATCTCTTTGTTTTGATGGGTGAGGGAATGTCATTTCACTGGTTGAATGGGCAAGCTAGCCATGTGCAGGAGTTACATTTTCTTCTGGAAATGGTTTTATCTGACAAACTAAATGAGGTGGAATAATGTAAATGGTGAAGAAAGGTCTTAATTAAATATTCAAACATCCCTTGCTCCTCAAGACTCATTAACACCCCTTCGCCAAGAGCAATGTTTTCATCCAAACGGTGAGGTTGTCATTTTTTGGGGAATTTGACCAAAGCGAACCCTACACCACAAACGGGGCTAAGAGTAAAGTTAGCAGGACCCACCAGTTTCTCAAGCCCCATCATGTAAAGTCACCCAGTCATTGCTCCGTCATCTCTCAATAGTGCAAAGCAGTTCTTACAGGGCTGTTGTCATGCATGCAACCATTTAAACAGCGTAAACTAGTCTTTGTGTAATAGATGGCACATTCCACCTGTGAAAACTAACATGGTTTTCAGAGAATTGTTCAGTGTTCCTCAAAGATGCTACTAGGCAGCATCTCTGGTTAGATTTGGAAGCTAGTAGCCTACTACCATAGAGGCTTAGAAACTACATGGTTGATGAGCATTTCACCATGTATCCTTTCAGtatgttaacccactgttaaggCAGAAAGTGGCTAAGTTGTGTGGGTATTGTTTCTCCAGTTAGTTCAAAAGGCACATTTATTTTGCCAGTCAATGGCAGACCGCTTGTTTCACTTCTGGTAGAAATACTCTCCTCCGCTATTATGGTGGTAGACTTTTAACAGCATTAAATAAAACACCTAGGACTATGTTGAA
>XM_036946751.1
ttgtttcttattcAATACCCCGTCCagctggtggcggtaatgcaccgttaacgttggatgccaaccgccgttaaacccGATCGAAGAAGAACCACAAACAGCGGAGCAGGGAGAGAGGTCGTTCCTGCGGAGGTAACCATGGCAATGACGGGCCAGAGTTCCTGCTCCTCGATGAGTAATCACACCAAGGAACGTGTGACCATGGCCAAGGTGACCCTGGAGAACTTCTACAGCAACCTCATCGCTCaacatgaggagagagagatgaggcagcagaagtTGGAAAAGGTGATGGATCAAGAGGGCTTGGCTGATGAAGAGAAGCGTATCCGGCGCTCCCAGCACGCCAGGAAAGAGACTGAGTTCCTGCGTCTCAAACGAACCCGCCTGGGGCTGGAGGACTTCGAGTCCCTCAAGGTGATTGGCCGAGGAGCTTTCGGAGAGGTGCGTCTGGTGCAGAAGAAGGACACAGGTCACGTGTACGCTATGAAGATCCTCCGCAAGGCCGACATGCTGGAGAAGgagcagGTGGGCCACATCCGTGCTGAGAGGGACATCTTGGTAGAGGCTGACAGTCTGTGGGTGGTTAAGATGTTCTACAGCTTCCAGGACAAGATGAACCTCTACCTCATCATGGAGTTCCTGCCTGGCGGTGACATGATGACCCTGCTAATGAAGAAGGATACTCTGACAGAGGAGGCCAGTCAGTTCTACATCGCTGAGACAGTGCTAGCCATCGACTCCATCCACCAGTTGGGCTTCATTCACAGAGACATCAAACCTGACAACCTGCTACTGGACTCCAGGGGCCATGTGAAGCTGTCTGACTTTGGTCTTTGCACAGGTCTGAAAAGGGCGCATCGTACCGAGTTCTACAAGAACCTGAATCATAGCCTCCCCAGTGACTTCACATTCAATAACATGAACTCAAAGAGGAAAGCAGAGACGTGGAAGAGGAACCGGAGACAGCTGgccttCTCTACTGTGGGCACCCCTGACTACATCGCCCCTGAAGTCTTCATGCAGAACGGATACAACAAGCTCTGTGATTGGTGGAGCCTTGGAGTCATCATGTATGAGATGCTGATAGGCTATCCCCCGTTCTGCTCAGAGACCCCCCAGGAGACCTACAGGAAGGTGATGAACTGGCAAGAAACACTGACTTTTCCCCCTGAAGTGCCCATTTCGGAGAAAGCTAAGGACCTCATCCTCAGGTTCTGCTGTGAGGAGGAGCACAGGATCGGAGCCACTGGAGTGGAGGACATTAAGGGCAACGCCTTCTTCGAGGGGGTGGACTACGACCACATCAGAGAGCGACCCGCTGCCATTCCCATTGAGATCAAAAGCATCGACGACACATCCAACTTTGACGAGTTCCCAGACTCTGATATCCTCCAGCCAACAGCTGCCCCTGTGGTGTCCAACCATTCTGAGGCAGACCTCAAGAACAAGGACTGGGTCTTCATCAACTACACCTACAAGCGCTTTGAAGGCCTCACAGCCCGAGGGGCTATCCCCTCCTACATGAAGACGGGGAAGAGATGAATCCTTCCTTTGTTTCCTCACTCACTCTACCTGCCCCTCAGACTGGCATTCAAATGGGATTCCCCATGGATCCCAACGTCCACTCCTCTCCCAAACTCCATTTTGGAGGTAGAAACTAAATGACCCTATTCAAGCTTGTTGAAGAGGTCCATCATAATTGAGACTATCCCATGTGTCTGATCCTGCTGAAGGGACCTTTCTCCTTCCTTTGCAGGGGACTTGTAGGGCTCTGTGTACTGTGTAGAGAAGTGTGACCTACTCCAACTCGAGTTTGTCTATCTAAAAAAGCCATAGCGTTGTGCTGGAAGGTATGGACAGTGATTGTTTTCTATGTGAAAACTCACATGCCATTCCACCCCTGGATTAAAGTTCCCAGTGTAGCAGTCTTGGAGGTGTTGATATGACCTTAGTTTGGGGACCATCTCTCGTAGATCTCCACTAGCATCGGTCCAACTCGGCCAAGACTGATTCTCTATCCTTTAGTATCCCAAGGGACTGAACCAAGATACCAGCATAACCGGTCACCTTAGGGGCCAGAGCCCATTTTCACATCAGAAGAACACACTTGACTGGCTATACCAGCCTTCTTCACTTCTTCCTCCACAAACAGACATTGAAGTCTTAAAGTTTAGCTGGGTGACCACCAGCATGGGACTAGGATCCAATATGCCTCACTTTTCTGTCAAAGGGCTAGCTTTTCTCTCTTCAGTTTCTTTCTTTTTTCCACACACAATAGAATTCCATCTTTTTAGAAATGAGTTCCGCCGTTAAAAACATTAGAAATAGTGTAATTTGACGAACTAATGATGCTTTTCAGGGAATATATGTcaatgtttttcatgtgtttttaGAGGGCTCTCTACTGAAGCATCTTGGATGATGGTGTTTCGGACCGGTTGCCTGTTGCAACAAGGCAACTCATAACCAAAAACAATGAGAGCTGAGAGTAATTGTTGTAACTATTCAGTCTAATTTGAGGGTTTCAATGGAATTGCTTTGTCTCCATTTAATTGTCACTTCCCTACTGCCAATGGTGGAGCTGTTACATGGACTTTGGCAAGTGTTTATAGCAATAGAATCGCCTCTCTTGAATATGATTCTATTTGAAATGGAACTACCCCTTCCAGAAGCCCACCTTTTTAGGTTCTTAGTTTGACAATCATCCACTGTTAATATTAGCAACTTCATGCTCTCCTTCAACTCATTTGATTTACCAATACTCGTGGATATGCATGTCCTTTAGATAGAGagcaaaatcaaatacaaaaatatgttGAATGTACTGATTGAATGCTAAAATTTGGAGCATGTACCAACCATTATTTATGGTACTTTTCCATGGACCTTTGGGGTAGGGGAGCTATAAGTAAGGCCAAGATATTGATACTCTtatctttccttctctttttttGTCCTGACCACTGGTCGTTAAGGGCTTGGTAGGTGAGGTGGCAGAGCAAGTTTGTTCAGCGAATATGTAAGTAACAGAATAGAAAAGGAGCAGCATTTAGAGTATTGAGACACACTCAGGCTCTGTGACCCTAGGTTAGGGTCATTAACACACCCTTTCCACTTCCTGTCGTATCTATAGTTCTGTCTCTTCCTGTTGCTTGACTATTTCTTAGCAAGAATACTTTAAACATTACATTTGTCTGACGTTTTGTGTCAAGGATATGCCACCTGGTATGTCCTTACTTTTCAAGAGGCTAAGAGGTGTGAGTGAGAAACTCGACCTTAACTCTGTAAACAGGGCTATATGTGACTCACTGTTCTTAACACAATCCCAAATGCTGTCATTTGAATCGAATGTAATCCCAAGGTGTAGTTGAAGATGAATTTAATGccatgttgattccaaaatgCTGTAATTTGAATGGAATGTAGCCTAAACCACAGGAGTGGTAGGTTTGTCACACGTTGAAGATGTCTGGTATTTTGTTAAATATCTGTACGGTGTTCTGGGTAGTTCAGACTACTTGCTGAGATTTAATATCCAGACTTTTTTTTGTAGTTTTTACGACTGAGCGACAGAactgattttgagactggtctcacCTTTTACTGATGCTCGGTGCCCGAATGAACCTGTTGTAATGCCGGGTTGAAAAAGTATTGGGCGGATGACTTGGCAAAGTGCGAATaacgttttggaatatttgtattttaaATGTATGCTGCTTGGTGTGTGAGATTTGCATGTCTTTAGAGGATTGGGTGATGTGCTCAGTAAAAATAAGATGCTGGAATATGTAGTGCTCGATTAACCAACACTGATAAGGTGGGTGCTCTTTTGTAGATGTCATCcaactgtgtgtgtctgctgttATTTCCCCCAGGCACACAAGGTGTGGGAAACAGGATGTACAAACCTTTTTATAGGGAACATTCAATCAAAAGTAGGGGGAGTTGTATTTAATCCACTGTGGTGTGGGGTTTCTATTGTATATTTTCTGCCATTTCACATTGAATAACTGCACTTAATGTCTGTGGTGTTTCCGTTTGTACAGCAAAATAATGGGCCGCTCTGAAATCTCTTTGTTTTGATGGGTGAGGGAATGTCATTTCACTGGTTGAATGGGCAAGCTAGCCATGTGCAGGAGTTACATTTTCTTCTGGAAATGGTTTTATCTGACAAACTAAATGAGGTGGAATAATGTAAATGGTGAAGAAAGGTCTTAATTAAATATTCAAACATCCCTTGCTCCTCAAGACTCATTAACACCCCTTCGCCAAGAGCAATGTTTTCATCCAAACGGTGAGGTTGTCATTTTTTGGGGAATTTGACCAAAGCGAACCCTACACCACAAACGGGGCTAAGAGTAAAGTTAGCAGGACCCACCAGTTTCTCAAGCCCCATCATGTAAAGTCACCCAGTCATTGCTCCGTCATCTCTCAATAGTGCAAAGCAGTTCTTACAGGGCTGTTGTCATGCATGCAACCATTTAAACAGCGTAAACTAGTCTTTGTGTAATAGATGGCACATTCCACCTGTGAAAACTAACATGGTTTTCAGAGAATTGTTCAGTGTTCCTCAAAGATGCTACTAGGCAGCATCTCTGGTTAGATTTGGAAGCTAGTAGCCTACTACCATAGAGGCTTAGAAACTACATGGTTGATGAGCATTTCACCATGTATCCTTTCAGtatgttaacccactgttaaggCAGAAAGTGGCTAAGTTGTGTGGGTATTGTTTCTCCAGTTAGTTCAAAAGGCACATTTATTTTGCCAGTCAATGGCAGACCGCTTGTTTCACTTCTGGTAGAAATACTCTCCTCCGCTATTATGGTGGTAGACTTTTAACAGCATTAAATAAAACACCTAGGACTATGTTGAA

Function

NR:

description
serine/threonine-protein kinase 38

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08790 STK38, NDR; serine/threonine kinase 38

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036946750.1 False 4891 mRNA 0.45 13 34810182 34830816
XM_036946751.1 True 4882 mRNA 0.45 13 34810182 34830816

Neighbor

gene id symbol gene type direction distance location
LOC110491855 LOC106566937 coding upstream 53069 34711651 ~ 34757113 (+)
LOC110491854 LOC106567355 coding upstream 138601 34663198 ~ 34671581 (+)
LOC110491853 LOC106567354 coding upstream 147115 34646546 ~ 34663067 (+)
si:ch73-70k4.1 faap20 coding upstream 368719 34434347 ~ 34441463 (+)
LOC110491848 morn1 coding upstream 655512 34073929 ~ 34154670 (+)
LOC110491044 NA coding downstream 53085 34883901 ~ 34896237 (+)
LOC118939458 NA coding downstream 130471 34961287 ~ 34974894 (+)
LOC118939524 NA coding downstream 417962 35248778 ~ 35250357 (+)
LOC110491864 LOC106566946 coding downstream 494600 35325416 ~ 35334464 (+)
LOC110491045 NA coding downstream 1175718 36006534 ~ 36018831 (+)
G1367634 NA non-coding upstream 111952 34697743 ~ 34698230 (+)
G1367590 NA non-coding upstream 142093 34617580 ~ 34668089 (+)
G1367579 NA non-coding upstream 204442 34605527 ~ 34605740 (+)
G1367374 NA non-coding upstream 205347 34604597 ~ 34604835 (+)
G1367305 NA non-coding upstream 306237 34503640 ~ 34503945 (+)
G1367736 NA non-coding downstream 52124 34882940 ~ 34883173 (+)
G1367737 NA non-coding downstream 52418 34883234 ~ 34883797 (+)
G1367739 NA non-coding downstream 55754 34886570 ~ 34886814 (+)
G1367747 NA non-coding downstream 69276 34900092 ~ 34908811 (+)
G1367766 NA non-coding downstream 98242 34929058 ~ 34929292 (+)
G1366438 NA other upstream 1096562 33713233 ~ 33713620 (+)
G1364937 LOC106613263 other upstream 2140051 32669696 ~ 32670131 (+)
G1364907 NA other upstream 2203049 32606790 ~ 32607133 (+)
G1368422 NA other downstream 911934 35706331 ~ 35779587 (+)
G1368473 yo84 other downstream 1001475 35832291 ~ 35832708 (+)
LOC110491910 LOC108432721 other downstream 3583041 38390387 ~ 38416472 (+)
G1372263 NA other downstream 4790558 39621374 ~ 39621885 (+)
G1372542 NA other downstream 5362996 40193812 ~ 40194351 (+)

Expression


Co-expression Network