Item | Value |
---|---|
gene id | si:dkey-157g16.6 |
gene name | LOC106567002 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048580.1 |
NCBI id | CM023234.2 |
chromosome length | 78541548 |
location | 39013363 ~ 39043903 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036946815.1 | False | 7280 | mRNA | 0.47 | 2 | 39013363 | 39023395 |
XM_021565801.2 | False | 6218 | mRNA | 0.47 | 3 | 39013363 | 39043902 |
XM_021565803.2 | False | 6241 | mRNA | 0.47 | 3 | 39013363 | 39043902 |
XM_036946814.1 | False | 6744 | mRNA | 0.48 | 4 | 39013363 | 39043903 |
TU1568571 | False | 2686 | TUCP | 0.37 | 2 | 39013368 | 39016088 |
TU1568572 | False | 638 | TUCP | 0.61 | 2 | 39018777 | 39022167 |
TU1568573 | True | 939 | lncRNA | 0.47 | 1 | 39022348 | 39023286 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110491920 | LOC106566993 | coding | downstream | 394979 | 38603424 ~ 38618384 (-) |
ppardb | LOC106566994 | coding | downstream | 413963 | 38581102 ~ 38599400 (-) |
LOC110491921 | NA | coding | downstream | 433378 | 38578513 ~ 38579985 (-) |
mkrn4 | LOC106566991 | coding | downstream | 435854 | 38571752 ~ 38577509 (-) |
LOC110491052 | LOC106566990 | coding | downstream | 448259 | 38562825 ~ 38565104 (-) |
LOC118939532 | NA | coding | upstream | 80969 | 39124872 ~ 39147845 (-) |
LOC110491931 | LOC106567008 | coding | upstream | 169795 | 39213698 ~ 39218182 (-) |
LOC110492900 | NA | coding | upstream | 174782 | 39218685 ~ 39219634 (-) |
LOC110491935 | LOC106567011 | coding | upstream | 266078 | 39309981 ~ 39333682 (-) |
zgc:158263 | LOC106567014 | coding | upstream | 507814 | 39551717 ~ 39563244 (-) |
G1372972 | NA | non-coding | downstream | 30230 | 38982793 ~ 38983133 (-) |
G1372913 | LOC106567001 | non-coding | downstream | 30923 | 38976077 ~ 38982440 (-) |
G1372914 | LOC106567001 | non-coding | downstream | 37638 | 38974147 ~ 38975725 (-) |
G1372964 | LOC106567001 | non-coding | downstream | 55548 | 38955648 ~ 38957815 (-) |
G1372915 | LOC106572725 | non-coding | downstream | 143832 | 38866177 ~ 38869531 (-) |
G1373014 | NA | non-coding | upstream | 9645 | 39053548 ~ 39053779 (-) |
G1373019 | NA | non-coding | upstream | 17358 | 39061261 ~ 39061533 (-) |
G1373025 | NA | non-coding | upstream | 29697 | 39073600 ~ 39073941 (-) |
G1373044 | NA | non-coding | upstream | 60392 | 39104295 ~ 39104507 (-) |
G1373047 | NA | non-coding | upstream | 64954 | 39108857 ~ 39109156 (-) |
G1372979 | NA | other | downstream | 21143 | 38991592 ~ 38992220 (-) |
G1372845 | LOC106566999 | other | downstream | 240486 | 38771628 ~ 38772877 (-) |
G1371532 | NA | other | downstream | 729297 | 38283408 ~ 38284066 (-) |
G1370826 | NA | other | downstream | 1351898 | 37660689 ~ 37661465 (-) |
G1370601 | LOC106566960 | other | downstream | 1734686 | 37277645 ~ 37278677 (-) |
G1373200 | NA | other | upstream | 378247 | 39422150 ~ 39422852 (-) |
G1373226 | LOC100380735 | other | upstream | 486021 | 39529924 ~ 39535299 (-) |
G1373378 | NA | other | upstream | 675961 | 39719864 ~ 39720977 (-) |
G1373490 | LOC100380641 | other | upstream | 896319 | 39940222 ~ 39943028 (-) |
LOC110491948 | LOC106567031 | other | upstream | 1038554 | 40080690 ~ 40119070 (-) |
G1372999 | NA | non-coding | upstream | 4445 | 39027731 ~ 39028002 (-) |
G1373000 | NA | non-coding | upstream | 6199 | 39029485 ~ 39029775 (-) |
G1373004 | NA | non-coding | upstream | 10644 | 39033930 ~ 39034132 (-) |
G1373010 | NA | non-coding | upstream | 15431 | 39038717 ~ 39038945 (-) |
G1373012 | NA | non-coding | upstream | 18949 | 39042235 ~ 39042557 (-) |
si:dkey-157g16.6 | LOC106567002 | other | downstream | 181 | 39013363 ~ 39043903 (-) |