nfe2 (LOC106567066)


Basic Information

Item Value
gene id nfe2
gene name LOC106567066
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 41649197 ~ 41657737 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565933.2
CCCTCTCTAACAACAATACCAGGTTGGTTTAACTCCAGGTGCTCCAGATCACACTCCATAAGCCTCTCCTTTCAGGGGACTTCTTTTGAGACATTTTATTGTAAGGGGTTTGGTTAGTTATAGGAAGATGAGTCCTGATCTGCTAGATTTGTGTAAGGATTTGTGCATCGTGTTGTATCATTGAATGGTTAATTTGTCACAGAACGTAGTTAACATTTAAACACCTATTCATCATAGCTAAGCTATTTGCCTTGGTTTAAAAGGTGATTCAACGGGATGCTTGTTGGTCTGTCGGGCCCTTGGTTTGTGGTTTTCTGCTCTTACAGGAAGGTTGCTTACATCGCAGGCAGAGACATCCCATTTATGCTGGGGGTTGTCTGTGAAGCAGagcagagagctagagagagagagcgacagagagacagagtgagagagagtgaaatcACATGCACTCCCTATAATGGTTGGTTAAAAGCAGACATATTAACAGAGGTCCTCACTAAACTGAATAGAAACACTTTTTTGTTCTGTTTctactttacattttttttaacattttttttaccaGGATTATGTTTCTTACGTGTCAGTCTGAAGATTTTTTTCTCCTGAACACCTGttgaagacacagagacatgttGCTCAGGAGGGGGCGCTGCAACCACAGCCTGTCCTGAATGTGTGCAGCAGCCAACTATGTGCTCCCATTGAGGAGGCACAGTGAGGGCTTGGCGAATCCTGGCAGGCTGTGTGGGGGGGTATCGATGCCCACCCATGCCCCTGGAGCCCGGTCACATGGAGCCCCCCACCCACACGACGAAGAGATGGACTTGGCCTGGCAGGAACTGATGGCCATCACTGAGCTTCAGGAGTTTGAGGTCCCACATGACAGCCCAGATGAAAATATTCAGTACCATCCCATGGAGCTGCCCATCTCTCTGGGAGGTTATGGCATGGCTCAGTCTCACTCTCATACAGAGCCCCTCCCCTGTGGTGGTGAGACAAATCCTGATGCTGCTTATGAGGGATCCTACTCTAAAGTAATGCCAGCTTGCCAACATCAGGCCACCGGGGAAGCAGCAGCAGAGGCACTGTACGGACATTCTGGAAACCATTCTGGAAACCATTCTGGAGCCCAGCTGAACCCCAGAGTTCTGAACCCTATACAGCCACCGCTGATGAGCCTTCTAGAGCATATGAGTCTCCCGAGCGTCGGTGGTGAGGGGCTTGTTGGAAACGACAATGCTGGCCCCTCTCTGGGCCCGGGGCGGTACGTGCTAGGGACAAGTCATGGGCAGAGCAAACACCCACCATGCACTATGGATGATCTGGAATCTGACTCTGGCCTATCTCTGGGTTCCAGCCCACCACTAGCCTCACCAGATGATGCCATGACTGGTGTCCCTGCTTATTCAAGCACAGAGGTTGGTCTGAACTTTAGTCACGGGGAGATGGAGAATATGGGTGAGCAAGGTGGGAGAGCTAGCCTCTTTTACTCTGTGGACTATCAGCAGCATCCCAATCACCCCTACCACTACTCAGGGATGCACTCCTCTTACTTCCCTGTAACACAACCATCCCAAATGCAACCACAGCCTCACTTCCTGCCTCCCATGTCAATGAAACATCAACATGGTTTACCCAGTGCCTTGAACGACCGGCATCTTAACAGCTCTGCTACCAGAGAGAGCTCTCCCCAGGCGTTCTATGAAAAACCCAGAGGTAACCCTCTTCCTGTCCCTCTGAGCCGGGACGAACGCCGAGCCCTCGCCCTCAAGATCCCTTTCTCTCTAGAGAAGATCATCAACCTACCTGTGGACGACTTCAACGAGCTCCTGACACAGTACACCCTCACGGACTCCCAGCTCGCCCTCGTCAGGGACATCCGCCGGCGGGGGAAGAACAAGGTGGCAGCCCAGAACTGCAGGAAGAGGAAGCTGGAGAACATTGTTTACCTGGAGGGGGAGTTGGGTCAGCTGCAGGCCCAGAGGGAACATCTGGCCAGGGAGAGGTTGGAGTTCCAACGCAACCTGACTATTGTTAAACACCGCCTCACAGACTTGTATGCTGAAGTCTTTTCTCAGCTCCGGGATGAGGATGGACACCCCTACTCTATAGAGGACTACTCTCTACAGCAGACCCCTGATGGGAACGTATACCTGGTGCCTCGTAGTGAAGTGTTGGATGGAGAATAATGTATGAAATCTATTGGACAGTTATTGTATACTGCCTCAGTTTATATACCAATATGAAATTGTTGCTAAATCTACAGTACAATAAGTGCCATTAAGGATATTTACATACACTGTTCCATGGTTTTGTATGTAGAGATCAGATAAAATGGCAGCTAAAAGGCCTCCATGTTAAACTAATCAATATTTAGGGCCTTTAGACAGtactcataccccttgacttattccacattttgttgttatagcctgaattcaaaatggatcaaatatactgaacaaaaatataaacgctagTTCAATataaggaagtcagtcaattgaaTGAAATgcattaggcccaaatctatggatttcacatgactgggaatagatATGCATCTATTGGTAACAGCTACCTTCAATACAaataggcctcaggatctcgtcacggtatttctgtgcattcaaattgccatcgataaaatgcaattgtgttcgttgtccgtagcttatgcttgcccataccataaccccaccacggGCATCAGTAAACCATACATGAGGTcggtggttgtgaggccggttgccaaattctctaaaccgTTGGGGAAGCGGCTTATGGTATAGAAATGAACATTtaaattctctagcaacagctatggtagacattcctgcagtcagcatgccaattgcacgctccctcaaaacttgagacatctgtggcattgtgttgtgtgacaaaactgcacattttagtggccttttattgtccccagcacaaggtgcatctgtgtacaCTTCTGCAGTGTattgatcatgccgtttaatcagtttcttgatatgccacacctgtcaggtggatgaattatcttggcagagggaaaattctcactaacagggacagaaacaaatttgtgcacaacaattGAGAGAAACAAGCTGTTTGTGTGTAtgggacatttctgggatattttatttcagctcaggaaacatgggaccaacactttgcatgttgcgtttatatttttgttcagctaCACGAAATACCCtaataatgacagtgaaaacatgtttcaagaaatgtttgcaaatgcattgaaaattaaataaagaAATATCACTTGCATTAGTGTGATAtcccctttggcagcaattacagcggagtctttctgggtaagtctaagagctttgcacacctggattgtacaatatttgcacattattattattaagcaTTGCATGACAGCTATTTTCccatcttgccatagatttaaacCAGATTTAATTCAAAACTATGCCACACTGCAACATTCAATGACGTCTTGGTAtatctggccttgtgttttaagttgtcctgctgaaaggtgaatgtgtTGCCTGGAAAGCAGACCACCAGGTTTTCGCTGGTGCGTAGCTCTATTCAGTTcgttttttatcctgaaaaattacctagtccttgccgatgacaagcatacccataacatgcagGCACCACCACACTTGAAAATATGGTATTGGATTTGCCTctaacataacgctttgtattcagggcagttaatttctttgccacattacTTTTGTGCCTTACtgcaaataggatgcatgttttggaaaacatctatacaggcttccttttcactgtaatttaggttagtattgtggcgtAACTTAACTGTTGACCCCTcagttctatcacagccattaaactgttaaAATcagcattggcctcatggtgaaatctgaGTGTTTTCCTTCCGCTCCGGCAACAGTTAGGAAGGCCGcatgcatctttgtagtgacttggtgtattgatacatcaagAGTTAATatataccaataggtgcccttggCGAGGCATTTGAAAATCTCCCTGGTCCTTGAGGTCAAATCGGTTGAAATTCTATTTGACTTACGGAATTATAAATAAAATCAGCAGTTTTGCTGAACTACAACAATAATCCACCTTGAtattgtatgtaggccagtgacaggctcaatttaaattcaggctaggaaaatgtggagaaagtcaggGGGGAGAATACTTAAGGCACTGTAGTTACGTGAGCTAACCAGTCATATGCCTATGCTCGTTCTGGATACAATGATAAATCTAAAATGTACATTTGGGAATTCTATTATAAGAATGTCTATGATTTTTACAGTCCATGTATATCAGAATATGAAGTGTGTACCATGTGGTAGTTGAACAGTATTTATGAGGAAAAGtaggtttaaaaaatattttattgatAAACAGGAAGTGGGTAAAAACAAGTTAAAATCCTGCACAGCAGTCTTCACAGTATACAAATAGCCAATTGCATCTTTCCAGGCACCCTAAAAGAGAACAGACCATTGTTTAAAATCAGGACAGCCTCACAAACTCTTAATATTTCCAAGTTATCAAAAGGTCGTCGCTTACTATATGCAATGCAACAATGTTCCGCTTAAAAATCATGCTTTTGGATAGCTGTCCTTTCGATTCAGTCATTTTCCTAGAAAGCACCAGAGGAAAAGGAGACAAATGAATATCAGAAGATAAACCAATGAAAAAGGCGTTAGTGATATATTCCATGATTTGACTGCAAACGTCAGCATGCATTATGAGATTGGCACGCTGGTAAAGACAATGTTACGCAAAAGGTCCAGACCGTTCTATTAGATGGGGGGCATTGGTTTCTAATAAAACACTGCACatccaaataaaaatgtacaCGGTCATTAATGCTATACTATGAATTTCTACAACAAAACTAGTGTATGCTCATACCAACTACAGAACATGTTATTCAAACTGACAGTAGTTGGAAAAGTCTTCTTACCTACAGGCGGCATCTAAGTGCTTTGGTAGCTGCTGTCTGCTAGTCTCACATGCCTTCTTGCTACTCACTCTCCTGCTTCACACTGCTCCTTCCTGCCAGGCGATGGGTTTGTTTGCTACGTCTCTCCCTCAGCTCAGCTGGCTTCCATGGCTGGCTAGCCTCAAGACTGCATCATGTAAGCTAGCCTTCTGCTGGCAGCTGTACTGTCTGACAGGAGAGTCTGATCTAGCCATCCAACTCACGTCTCTGGAGCAGTTCTCAAAGAGATGGGCTCTCTGTGTGGACCAAGTATTTGAACTACCATAGCTTCACCCATTGGCGTTCATCAAGGACTTCAACGCTATTGTGACACTACGTTGTCACAAACCTTCCATTGATGTGCTGGGATATGAGTGTCTACATTCTGTAGTATGTGCATTGGAACAGACTAAGAATGTCTTGTGTAAGAAAGGAATAAAGCATATTGGACTAG

Function

NR:

description
transcription factor NF-E2 45 kDa subunit

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG:

id description
K09039 NFE2; nuclear factor erythroid 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565933.2 True 5468 mRNA 0.44 4 41649197 41657737

Neighbor

gene id symbol gene type direction distance location
cbx5 LOC106567067 coding downstream 3976 41637837 ~ 41645221 (-)
calcoco1a LOC106572538 coding downstream 253529 41385586 ~ 41395668 (-)
LOC110491987 LOC106567064 coding downstream 370200 41262830 ~ 41278997 (-)
mfsd5 mfsd5 coding downstream 395414 41249937 ~ 41253783 (-)
LOC110491989 LOC106567063 coding downstream 401158 41242965 ~ 41248039 (-)
znf740b LOC106567069 coding upstream 30509 41688246 ~ 41697155 (-)
zgc:174906 LOC106567072 coding upstream 42658 41700395 ~ 41704276 (-)
spryd3 LOC106567075 coding upstream 73455 41729589 ~ 41814584 (-)
LOC110492013 LOC106567078 coding upstream 194890 41852627 ~ 41857489 (-)
LOC110492014 LOC106567079 coding upstream 204649 41862386 ~ 41879805 (-)
G1375479 NA non-coding downstream 38840 41610117 ~ 41610357 (-)
G1375396 hoxc10aa non-coding downstream 155120 41489002 ~ 41494077 (-)
G1375395 NA non-coding downstream 166911 41481877 ~ 41482286 (-)
G1374850 NA non-coding downstream 192586 41456386 ~ 41456611 (-)
G1374790 NA non-coding downstream 249043 41363933 ~ 41400154 (-)
G1375541 NA non-coding upstream 180689 41838426 ~ 41841200 (-)
G1375561 NA non-coding upstream 194299 41852036 ~ 41852546 (-)
G1375576 NA non-coding upstream 206495 41864232 ~ 41952990 (-)
G1375583 LOC107714922 non-coding upstream 228272 41886009 ~ 41887418 (-)
G1374491 LOC106567058 other downstream 619791 41026775 ~ 41029406 (-)
rps26 LOC106567051 other downstream 794608 40852758 ~ 40854671 (-)
G1374237 LOC106567042 other downstream 1123919 40522997 ~ 40525278 (-)
LOC110491948 LOC106567031 other downstream 1564371 40080690 ~ 40119070 (-)
G1373490 LOC100380641 other downstream 1706169 39940222 ~ 39943028 (-)
G1375495 NA other upstream 6011 41663748 ~ 41664049 (-)
LOC110492054 LOC106567113 other upstream 895822 42548642 ~ 42569532 (-)
LOC110492059 LOC106567118 other upstream 1114569 42767849 ~ 42773348 (-)
LOC110491060 LOC106567122 other upstream 1461151 43117471 ~ 43124619 (-)

Expression


Co-expression Network