Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118939612 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 42020226 ~ 42020361 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036645.1 | True | 136 | mRNA | 0.42 | 1 | 42020226 | 42020361 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100301771 | parp3 | coding | downstream | 2391 | 42014391 ~ 42017835 (-) |
| LOC110492019 | LOC106567084 | coding | downstream | 6226 | 41961939 ~ 42014000 (-) |
| LOC110492014 | LOC106567079 | coding | downstream | 140421 | 41862386 ~ 41879805 (-) |
| LOC110492013 | LOC106567078 | coding | downstream | 162737 | 41852627 ~ 41857489 (-) |
| spryd3 | LOC106567075 | coding | downstream | 205642 | 41729589 ~ 41814584 (-) |
| LOC110492022 | ccnt1 | coding | upstream | 25788 | 42046149 ~ 42054227 (-) |
| LOC110492023 | LOC106567088 | coding | upstream | 39632 | 42059993 ~ 42064731 (-) |
| LOC110492025 | LOC105013598 | coding | upstream | 64700 | 42085061 ~ 42088234 (-) |
| LOC110492027 | LOC106567093 | coding | upstream | 105305 | 42125666 ~ 42139058 (-) |
| LOC110492028 | jph2 | coding | upstream | 128984 | 42149345 ~ 42150283 (-) |
| G1375639 | NA | non-coding | downstream | 10443 | 42009541 ~ 42009783 (-) |
| G1375632 | NA | non-coding | downstream | 20905 | 41999093 ~ 41999321 (-) |
| G1375631 | NA | non-coding | downstream | 22148 | 41997850 ~ 41998078 (-) |
| G1375630 | NA | non-coding | downstream | 23010 | 41996925 ~ 41997216 (-) |
| G1375627 | NA | non-coding | downstream | 35618 | 41984381 ~ 41984608 (-) |
| G1375664 | NA | non-coding | upstream | 55319 | 42075680 ~ 42075954 (-) |
| G1375665 | NA | non-coding | upstream | 55849 | 42076210 ~ 42076427 (-) |
| LOC118939538 | NA | non-coding | upstream | 77756 | 42098117 ~ 42230765 (-) |
| G1375674 | tuba2 | non-coding | upstream | 89111 | 42109472 ~ 42123715 (-) |
| G1375731 | NA | non-coding | upstream | 165368 | 42185729 ~ 42185955 (-) |
| G1375495 | NA | other | downstream | 356177 | 41663748 ~ 41664049 (-) |
| G1374491 | LOC106567058 | other | downstream | 990820 | 41026775 ~ 41029406 (-) |
| rps26 | LOC106567051 | other | downstream | 1165637 | 40852758 ~ 40854671 (-) |
| G1374237 | LOC106567042 | other | downstream | 1494948 | 40522997 ~ 40525278 (-) |
| LOC110492054 | LOC106567113 | other | upstream | 533198 | 42548642 ~ 42569532 (-) |
| LOC110492059 | LOC106567118 | other | upstream | 751945 | 42767849 ~ 42773348 (-) |
| LOC110491060 | LOC106567122 | other | upstream | 1098527 | 43117471 ~ 43124619 (-) |
| G1376748 | NA | other | upstream | 1139151 | 43159512 ~ 43170042 (-) |
| LOC110492063 | LOC106567124 | other | upstream | 1197448 | 43217803 ~ 43243705 (-) |
