LOC110492036 (LOC106567102)


Basic Information

Item Value
gene id LOC110492036
gene name LOC106567102
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 42331636 ~ 42357574 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566006.2
TTTGAGGCGATGGAAAGATATTCTTTATTCTTtgtttggatccccattagcagaCACATTGGCGACCGCGAGTCTTCCTGGGGTCTGAAATATATATCAACAGAGAAACTGAGAAGAGGCCTGGGTTTGGAAATGTTGAAGTCTGAAGATTAGAGTGAAACCTTTTCAAAACAACATCCATCCaagagaggaaatgagagtacaagacagaaagaaaggcagaggagaagggaaagggagagaacaACTGATGGGCTGCTATGTGCTCTCTGACCGTCGGATCTACTGACTGGGAGTACCCTCATCAGTGACGGACTTGACTGGCCTGAACGAAGTGCAATGATACAGTTAAAGTATTCTTAGGGGAATTCATAGATTACATATTCCCTTTCAGTGTAGTTACTCATTCACTGTGAGTGAGGCTCAGACAGGATAGCTGTATGGTGGAGAAGAAGCAAAAAGACGGATTTTAGAGtgaTGGGGTCCTGTGTGGCCTTGGTGCCTGTCCTTCTGCTCCTGTCCTCCCTGCAGCACACCAGTGAGGCTGGAAGGGTCCTGGTCTACCCTGTCGACGGCAGCCACTGGCTCAACATGAGGATACTGGTGGAGGCGCTTCACACCCAGGGTCACCAGGTGACCATTCTGCGCTCCTCCACCAGCTGGTACGTGGCTGAACACTCCCCCCACTACACCTCCATCACTGTGCCCCAGGCTCAGCCCCAGAACATCGAGAGTCAGGAGTTCATGGCCCACTTCCTGAAGAGGTCGCTGGAGATCCAGCGGGGCAGGGGCTCACCCTGGGCCTTCCTGCAGTTCTGTGGGAACCTCTTCAGCATGCTGAGGCAGAACCAGGAGATGGTGGCTGAGCTGGTCGTCACCATGTTTGAGAACCAGACTCTGATGACAGATCTGAAAGAGGCTGAGTATGACCTGGTCCTGACTGACCCAGTGTTCCCTGCCGGGGTCCTGGTGGCCCACTACCTCCAGCTCCCCCTGGTTCTCAATGTGCGCTGGCACCTCAGCGGGGAGGGACACTTTGCCATCGCTCCCTCGCCACTATCCTACGTCCCTCAAATATTCTCCCGCAACTCTGACCTGATGAACTTTGCACAGAGGCTGAGTAACATATTCTACCACTGTCTCAGCTACTACATGTATCGTTACGTCTCCAACCCGCCTTACCAGGCCGTGTGCGACCGCTACTTTGCCAATGATGAGGTGGACGTCATATCCCTTATCCAGGGAGCTGATCTGTGGCTGATGAGGGTGGACTTCGTCTTTGAGTTCCCTAGACCCACCATGCCGAACGTGGTCTACACTGGTGGGTTCCAGTGCAAACCCTCCAAGCCTTTACCTGCAGCTTTAGAGGAGTTTGTCCAGAGTTCTGGAGAACACGGGGTGGTGGTGATGTCACTGGGGACTCTGTTGGGTGGACTGGATCCAGAGATGACAGAGGTCATAGCCTCAGCCTTCGCCCGGCTGCCCCAGAAGGTGGTGTGGAGACACCTGGGAGAGAGGCCTTTGTCTCTAGGCAACAACACCCTGCTAGTGAAATGGCTGCCTCAGAACGACCTCCTGGGTCACCCCAAAACCAAAGTGTTCGTCACACACGGGGGCACCAACGGGATCTACGAGGCCATCTATCACGGAGTCCCATTGTTGGGTATCCCTCTCATCTTTGACCAGTTTGATAACATGGTGCGCATGAAGGCCAGAGGAGTGGCGGAGGTTATAGAGGTTACAACGTTAGAGGTGGAATCCTTAACACAGACTCTGATGGGCATTCTGGACGAAGAGAAGCCCTACAGAGAGAATATGAGAAGACTATCACGGTTGCACCACGACCGGCCTATAGAACCTTTGGACAGCGCCATCTTCTGGCTGGAGTTTGTTATGAGACACAAGGGGGCAGCTCACCTACGTACAGAGTCCTATAAGATGCCATGGTATGTCTATCATAATGTGGATGTTCTAGCACTGCTGCTGGGCTCTGCTCTGCTTGTTTTGGTGTTGCTTGTGGTTTCCTGTATGTGCTTGGTAAGAGGATTACGAAAGAGGATAAAGTCCAAGTTGGAGTGATTATGTTACTTATGGCCTACTTACTTAGTTATTACACAGCTTACAATCCAAgcatacagtagatagatatggGGAAAGCAATTGCAAAAAAACTGAAGGTTGTTATAATGGGATTTCCaaagtgtgtctgtctctggtaTTTTATGTAGAGAACCTTCCTAATATATCAAAGATATAGGTTGTAAATATTTATTACATGCACTTTTTGAATCAAGGTTTTATTGGGTTATTATGATGCAATCCTACATTTGCCATGTATTTTCACTCATGTTTCACTCAATTGTgtaatatacagtgtaaatggtGACAATTTTTGGGTTTTGAATAAAATGAGAATACGTTCAAATGATGCGGAATAAACAGCGAAAGTCTTCTTGATAACTTTGCATTTTCACGTCAATACTTCACAAGCCACTTTTTAAAACCTTATGGTCAGGTATGCATCAGATCACCACACATGAAATCCTCACGTGGTGATAACTCTACATCTTGAAAGCAGATTTACACCTTTTGTGAAAACAACATTTCCTGTTCTTCTGCAAATGCATTCACAGCACTTTGTGTTTTCACATGGCTCTTATTGTATCCTTAATACAAGGCATCATAAACCAATACAGCCTACTGTGTGCTTAGTTGCAACTGTCTGGCAAATATTATACATTTACAACATCtgttgaatatactgtatatttacaatATATTTACATCTCTTAGATACAATGAATAACCAGGAATGTACATTCATGCAGATGACCATGCAAGGAATACAATGTACTTTCCATATCAGCATATTTATAGTACAGCTCAGTAAACACAGCAAACACACAAGAGACCTATAGAAATCTGGGAACTGTACTTTGAacttctgtcacgttctgacctttatttcctttgttttgtatttatttagtttggtcagggcgtgagttgggtgggcagtctatgtttgtttttctatgatttgggtatttctatgtttcggcctagtatggttctcaatcagaggcaggtgtctctgttgtctctgattgagaatcatacttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctctgtgtttgcaccagataggactgtttggggttttcacgtttcttgtttttgtattcagttgttcatgtgtacatttacttattaaaagaaccatgga
>XM_036946926.1
CAGGCTGTCAGAGTGTTTCGTGCATTACCAAGTGCAGCTCGCCACCTACTGCTGTGAACACAAATTTCAGTTTTGGACATTATTTCCTTTCTGACCAATTTATTCATCACTGTGCGCGAGTACCAAAACTTGTAACGCCCAATgcgggagatgagaagcaggtacagggagtgaaccaTTTAACATAGACGGACATGCAACGGAacaagaacagcgtctggacagaaACACGACAAAACAATGCAACTACAGGGAACAACACAGAGGAGCagacacactaccgttcaaaatgaTGGGGTCCTGTGTGGCCTTGGTGCCTGTCCTTCTGCTCCTGTCCTCCCTGCAGCACACCAGTGAGGCTGGAAGGGTCCTGGTCTACCCTGTCGACGGCAGCCACTGGCTCAACATGAGGATACTGGTGGAGGCGCTTCACACCCAGGGTCACCAGGTGACCATTCTGCGCTCCTCCACCAGCTGGTACGTGGCTGAACACTCCCCCCACTACACCTCCATCACTGTGCCCCAGGCTCAGCCCCAGAACATCGAGAGTCAGGAGTTCATGGCCCACTTCCTGAAGAGGTCGCTGGAGATCCAGCGGGGCAGGGGCTCACCCTGGGCCTTCCTGCAGTTCTGTGGGAACCTCTTCAGCATGCTGAGGCAGAACCAGGAGATGGTGGCTGAGCTGGTCGTCACCATGTTTGAGAACCAGACTCTGATGACAGATCTGAAAGAGGCTGAGTATGACCTGGTCCTGACTGACCCAGTGTTCCCTGCCGGGGTCCTGGTGGCCCACTACCTCCAGCTCCCCCTGGTTCTCAATGTGCGCTGGCACCTCAGCGGGGAGGGACACTTTGCCATCGCTCCCTCGCCACTATCCTACGTCCCTCAAATATTCTCCCGCAACTCTGACCTGATGAACTTTGCACAGAGGCTGAGTAACATATTCTACCACTGTCTCAGCTACTACATGTATCGTTACGTCTCCAACCCGCCTTACCAGGCCGTGTGCGACCGCTACTTTGCCAATGATGAGGTGGACGTCATATCCCTTATCCAGGGAGCTGATCTGTGGCTGATGAGGGTGGACTTCGTCTTTGAGTTCCCTAGACCCACCATGCCGAACGTGGTCTACACTGGTGGGTTCCAGTGCAAACCCTCCAAGCCTTTACCTGCAGCTTTAGAGGAGTTTGTCCAGAGTTCTGGAGAACACGGGGTGGTGGTGATGTCACTGGGGACTCTGTTGGGTGGACTGGATCCAGAGATGACAGAGGTCATAGCCTCAGCCTTCGCCCGGCTGCCCCAGAAGGTGGTGTGGAGACACCTGGGAGAGAGGCCTTTGTCTCTAGGCAACAACACCCTGCTAGTGAAATGGCTGCCTCAGAACGACCTCCTGGGTCACCCCAAAACCAAAGTGTTCGTCACACACGGGGGCACCAACGGGATCTACGAGGCCATCTATCACGGAGTCCCATTGTTGGGTATCCCTCTCATCTTTGACCAGTTTGATAACATGGTGCGCATGAAGGCCAGAGGAGTGGCGGAGGTTATAGAGGTTACAACGTTAGAGGTGGAATCCTTAACACAGACTCTGATGGGCATTCTGGACGAAGAGAAGCCCTACAGAGAGAATATGAGAAGACTATCACGGTTGCACCACGACCGGCCTATAGAACCTTTGGACAGCGCCATCTTCTGGCTGGAGTTTGTTATGAGACACAAGGGGGCAGCTCACCTACGTACAGAGTCCTATAAGATGCCATGGTATGTCTATCATAATGTGGATGTTCTAGCACTGCTGCTGGGCTCTGCTCTGCTTGTTTTGGTGTTGCTTGTGGTTTCCTGTATGTGCTTGGTAAGAGGATTACGAAAGAGGATAAAGTCCAAGTTGGAGTGATTATGTTACTTATGGCCTACTTACTTAGTTATTACACAGCTTACAATCCAAgcatacagtagataga

Function

NR:

description
UDP-glucuronosyltransferase 2A2-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566006.2 False 3267 mRNA 0.46 4 42331636 42338007
XM_036946926.1 True 1961 mRNA 0.53 5 42332757 42357574

Neighbor

gene id symbol gene type direction distance location
LOC100136795 LOC106567100 coding downstream 20457 42276720 ~ 42311179 (-)
LOC118939538 NA coding downstream 100871 42098117 ~ 42230765 (-)
LOC110492030 LOC106567094 coding downstream 155163 42174010 ~ 42176473 (-)
LOC110492028 jph2 coding downstream 181353 42149345 ~ 42150283 (-)
LOC110492027 LOC106567093 coding downstream 192578 42125666 ~ 42139058 (-)
LOC110492045 LOC106567106 coding upstream 29662 42387236 ~ 42398873 (-)
LOC110492048 taf8 coding upstream 51780 42409354 ~ 42415213 (-)
LOC110492049 LOC106572624 coding upstream 57666 42415240 ~ 42416592 (-)
LOC110492050 LOC106567110 coding upstream 62641 42420215 ~ 42430379 (-)
LOC110492051 LOC106567111 coding upstream 88199 42445773 ~ 42468841 (-)
G1375731 NA non-coding downstream 145681 42185729 ~ 42185955 (-)
G1375674 tuba2 non-coding downstream 207921 42109472 ~ 42123715 (-)
G1375665 NA non-coding downstream 255209 42076210 ~ 42076427 (-)
G1375664 NA non-coding downstream 255682 42075680 ~ 42075954 (-)
G1375827 NA non-coding upstream 10953 42368527 ~ 42368847 (-)
G1375828 NA non-coding upstream 12687 42370261 ~ 42370596 (-)
G1375831 LOC106567105 non-coding upstream 20712 42378286 ~ 42378530 (-)
G1375832 NA non-coding upstream 21061 42378635 ~ 42378931 (-)
G1375833 NA non-coding upstream 22675 42380249 ~ 42380572 (-)
LOC110492013 LOC106567078 other downstream 476275 41852627 ~ 41857489 (-)
G1375495 NA other downstream 667587 41663748 ~ 41664049 (-)
G1374491 LOC106567058 other downstream 1302230 41026775 ~ 41029406 (-)
rps26 LOC106567051 other downstream 1477047 40852758 ~ 40854671 (-)
G1374237 LOC106567042 other downstream 1806358 40522997 ~ 40525278 (-)
LOC110492054 LOC106567113 other upstream 195985 42548642 ~ 42569532 (-)
LOC110492059 LOC106567118 other upstream 414732 42767849 ~ 42773348 (-)
LOC110491060 LOC106567122 other upstream 761314 43117471 ~ 43124619 (-)
G1376748 NA other upstream 801938 43159512 ~ 43170042 (-)
LOC110492063 LOC106567124 other upstream 860235 43217803 ~ 43243705 (-)

Expression


Co-expression Network