cd34a (cd34a)


Basic Information

Item Value
gene id cd34a
gene name cd34a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 44560201 ~ 44596213 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564414.2
tagagagagagggggcaaagGAGAGAGGCCATATGAAACCAGCAGAGCATAAGCCACGCTTTATCCTGCCAGTCTGTCCCGCTCTGCGAGCACAGGAAACACGCAACTCCCccagccctcactcactcactcatcacGCTCTTTCACACActtctacagacacacacacacagcggctcACAAAGGACTGGAGGATGGCTGTGTCCATGAGAAGAATGAATGGGTCCTGGAGAGGGATGGCTCTAGCCCTGGTTCTCTGTACACTGCTCCTACACAATGAAGTTCACTGTCAAGATTCCATTGATACACCTTATACATCCGATGCCAAAGATTCCCCTGGTGCTGCACCCACAGACGCCCCAGGTGCTGCACCCACAGACGCCCCAGGTGCTGCACCCACAGACGCCCCAGGTGCTGCACCCACAGACGCCCCAGGTGCTGCACCCACATACACACCGGGGGCTGCACCCACAGACGCCCTGGGTGCTGCACCCACAGATGCAACAGgtACTGATGCCACCATCGAACCCCAAGCCCCTGTAGACGACAAGGCCACTACTGTCACTAACTCCACAGCTGACAACACTTCTGGGACCAGTACTCCAGTACCAGACCAGGACACTACCTTCACTCCAGTACCAGACCAGGACACTGCCTTCACCTCCATGGTGCCAGATCATGACCCCTTAGCCACAGGTGACACCTCTGGCACCACAGCTGGACCTGGTGTCGACACACAGGGCACTGAAGCTACTGATGACCCAGGCGCACCTGTTGTGCATCAGGCCCCTGTTTTTGTTCTTCCCACTGTTGAGTGTGTGGACAAGGAGGCAGTGAAGGACAAAGACACAGTCAAGGTGGAGCTTTCTTCAGAAACTAGCTGTTCAGTGACCAAGAGAATCATGGAGGATTCAGCCTGGTGCACAGGAGACTGCAACCTTAAACTGTTCCAGGAGGAGAACTCTAACACACTGGTTTTGACACGCTCTAATGGTGGAGTCAAAGATTTGTCAGAGAGCCTGAACAGCCAAGACATCAAGGGCCAGCTGGGTGTGGTGAATGCAGCTCCTCAGTGGGGTAAACACTCTTCCACCGTGCTGGTGTCTCTGCTCATCAGTGGCCTGCTGCTGGCTGCTGCCCTCATCGGAGGCTACTGTCTGAAgaaacactgcagacacaacGCCAAGGGCATGAGGCTGGCTGAGGATGCGTACCCAGTGGATGAGGAGAACCAGGGGAACACCCTGGTGTCTGTGGCGCCTCTCAACACCCTTGAGACCCGGGAGAAGCCCGCTAACGGGGATTCCCAAGAGGCCGCCAAGACCCAGCCCCCTCCCACCAACGGCCACTCCACCGCCAACTTGGCAGACACAGAGCTGTGAAGACTCCACTAGAACCCCTGGAGAAGAATGAAActtacccctccatccctccaacacCAACCCTTCCCCTCAGAACATGGCAGAACTCCAGCGACCCCCATCCTACAGTGGACATCAAGGACAAAAACTGCCCCTCATAACCCCAATAACCCCCACATAAACACTCCTTCAGACTCTCCATGTCCCCCACCAACTCCATGGTAAAGACAGATAAGATTGATGATGATAAGGCTTGATACTAatgtgaatgatgatgatgataataatgaggCCGAGGGCTGTATCCCTGTCCCTTGGATGCTTTCGTCATTCAGGCCTGGAGGTTGGGCCGAGGCAGGactgggtggggagggagggtttTACGTTGTTAATCACCACTGGCTCCAAGACAGCGGCTGGGGTCCCATCAACCACGCCATGTGCCCTGCCTGCACGTCATCAGGTTTAAAGCTTCCTTCCAAAAATCCGTTAACCATAAATAGAAGCAAAGCTTCACGTTCAATTCAAATTGGTCCTTAGACCTTAGTTGATCGCAAAAAAAAGTAACATCCTTAAATCTGTTTACAAAGTTCTGAGTGGAATAAAGGAGCGCTCTGAGCTTGTTTGTTCATCtttgtgcatgcttgtgtgtatgtgcttgctttttgtgtatgggtgtgtattTGAGCTAGCAATTTTGTGTGCGCAAGACTGTCTGCGAAATGTTTTTGCGTGTGTGCGCCaactatacatttttttttctttctcaatTTTGTAAAATGAGTAGACAAGGTGATGGCTTAGGGAGTTAGGTCCCCAGTAGTGGTGAGGAGAGGGGTCCTCTTTTGGCGCTTAATCTCACTGCCAATCTGTAGGAGACGAAGCAGGAAATAGTCTCCCCTTCATTACTGCAAGCTGAACCCAGATCAGCCAATGGTCTGACAGGAGGTAGAAAAAGAAGATCCACACCATGTCACCATGGCAACTGCTGAAAACCACCCCAGACTGATTTGTATAATGTCTGGGTCacagtgtagtgtgtatataaaGAGGTCAGGTGTGCCAATCCAAGTCAGTATTATGATATTTTCAATACCTTTTGTAATGGTATCGAATTAGACACttaatacatacagtattatattgaACAATGTTATATAATATGCTTCTGTTTTATGTTTTTGTGACTCTTGTGTACTCACACTTGCTTTGTTCTAAGCCACAGAAATCATTTTCACCAGCTTGCCATGCAGACATTCTGTATAGGAAGGAGTGATCATACACAGAAATCATTTTCACCAGCTTGCCATGCAGACATTCTGTATAGGAAGGAGTGATCATACACAGAAAGTACTTGTAGcttctttttgtttttcattttatgTCATACGAATTCTGAGGTTAAGGTATTGTTTGGGTCTCTTTTAGTGTGTCTGAAACATGTCTTTAGCCTAGTTGCCCATAtacgcaggtagcctagtgatgagagtgttggaccagtaaccgagagtttgctagatcgaatccccgagctgacaaggtaaaaaaaatctgtcgttctgcccctgaacaaggcagtttagccactgttcctaggccgtcattgtaaataagaaatgtgttcttaaccgagttgcctagttaaaaaatatACATGTTGCGCAAATGCTTGGCAATACATTTTAGCAGAACTGCATTTAAAACACAGCCCAATCTATTGTTTAAAAGTACACTCGGCATGCATAGCAGGGTGATTTCTTGTTTATAGACCTCTACAAGTAGATGAATTCATATAGTCTACCCTTAAAATCAGGAACTAAGAGGAATGTTACAATTTCCATTATGCATAACATTACATCACTGTTTTTGTTTTATCTAACTGGAGGAATTTGCcatttaaaaacaacaacatttgagCACATAAGTGTTACCTTACTTTCATTTCTACTTTTCAGAAATGTTCTGTATTTTTAACATCTCAAAATTACTGTTAATTCTACTAGCATCCTAAAGTTCAAGAATGGAATTTGGAAAATAAAAGAATGTTTTTATAAAATTTA
>NM_001281360.1
ctcACAAAGGACTGGAGGATGGCTGTGTCCATGAGAAGAATGAATGGGTCCTGGAGAGGGATGGCTCTAGCCCTGGTTCTCTGTACACTGCTCCTACACAATGAAGTTCACTGTCAAGATTCCATTGATACACCTTATACATCCGATGCCAAAGATTCCCCTGGTGCTGCACCCACAGACGCCCCAGGTGCTGCACCCACAGACGCCCCAGGTGCTGCACCCACAGACGCCCCAGGTGCTGCACCCACAGACGCCCCAGGTGCTGCACCCACATACACACCGGGGGCTGCACCCACAGACGCCCTGGGTGCTGCACCCACAGATGCAACAGGAGTCGCAGCCCACGCAGACGACACTCAAGgtACTGATGCCACCATCGAACCCCAAGCCCCTGTAGACGACAAGGCCACTACTGTCACTAACTCCACAGCTGACAACACTTCTGGGACCAGTACTCCAGTACCAGACCAGGACACTACCTTCACTCCAGTACCAGACCAGGACACTGCCTTCACCTCCATGGTGCCAGATCATGACCCCTTAGCCACAGGTGACACCTCTGGCACCACAGCTGGACCTGGTGTCGACACACAGGGCACTGAAGCTACTGATGACCCAGGCGCACCTGTTGTGCATCAGGCCCCTGTTTTTGTTCTTCCCACTGTTGAGTGTGTGGACAAGGAGGCAGTGAAGGACAAAGACACAGTCAAGGTGGAGCTTTCTTCAGAAACTAGCTGTTCAGTGACCAAGAGAATCATGGAGGATTCAGCCTGGTGCACAGGAGACTGCAACCTTAAACTGTTCCAGGAGGAGAACTCTAACACACTGGTTTTGACACGCTCTAATGGTGGAGTCAAAGATTTGTCAGAGAGCCTGAACAGCCAAGACATCAAGGGCCAGCTGGGTGTGGTGAATGCAGCTCCTCAGTGGGGTAAACACTCTTCCACCGTGCTGGTGTCTCTGCTCATCAGTGGCCTGCTGCTGGCTGCTGCCCTCATCGGAGGCTACTGTCTGAAgaaacactgcagacacaacGCCAAGGGCATGAGGCTGGCTGAGGATGCGTACCCAGTGGATGAGGAGAACCAGGGGAACACCCTGGTGTCTGTGGCGCCTCTCAACACCCTTGAGACCCGGGAGAAGCCCGCTAACGGGGATTCCCAAGAGGCCGCCAAGACCCAGCCCCCTCCCACCAACGGCCACTCCACCGCCAACTTGGCAGACACAGAGCTGTGAAGACTCCACTAGAACCCCT

Function

NR:

description
CD34a molecule precursor

GO:

id name namespace
GO:0007155 cell adhesion biological_process
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564414.2 False 3421 mRNA 0.47 8 44560201 44596213
NM_001281360.1 True 1255 mRNA 0.57 9 44562221 44596037

Neighbor

gene id symbol gene type direction distance location
LOC110492088 NA coding downstream 19444 44538351 ~ 44540757 (-)
LOC118939541 NA coding downstream 64933 44489262 ~ 44495268 (-)
LOC110492087 NA coding downstream 94460 44461373 ~ 44465741 (-)
LOC110492085 ptn12 coding downstream 110707 44429876 ~ 44449494 (-)
LOC110492081 LOC106567146 coding downstream 562361 43991364 ~ 43997840 (-)
plxna2 LOC106567158 coding upstream 25526 44621739 ~ 44964691 (-)
LOC110492092 LOC106567333 coding upstream 707507 45303720 ~ 45307537 (-)
LOC110492093 LOC106567160 coding upstream 712133 45308346 ~ 45315784 (-)
slc48a1a LOC106567162 coding upstream 719735 45315947 ~ 45320378 (-)
itga5 LOC106567163 coding upstream 782052 45378265 ~ 45432804 (-)
G1378523 NA non-coding downstream 15472 44544403 ~ 44544729 (-)
G1378466 NA non-coding downstream 23631 44535620 ~ 44536570 (-)
G1378469 NA non-coding downstream 24699 44534374 ~ 44535502 (-)
G1378470 NA non-coding downstream 37318 44521586 ~ 44522883 (-)
G1378556 NA non-coding upstream 4060 44600273 ~ 44600522 (-)
G1378563 NA non-coding upstream 16963 44613176 ~ 44613385 (-)
G1378566 NA non-coding upstream 21834 44618047 ~ 44618262 (-)
G1378568 NA non-coding upstream 22857 44619070 ~ 44619293 (-)
G1378624 NA non-coding upstream 132680 44728893 ~ 44729828 (-)
G1378530 NA other downstream 6654 44553014 ~ 44553547 (-)
G1377482 NA other downstream 867363 43692320 ~ 43692838 (-)
G1376991 NA other downstream 1221646 43337162 ~ 43338555 (-)
LOC110492063 LOC106567124 other downstream 1335818 43217803 ~ 43243705 (-)
G1376748 NA other downstream 1390159 43159512 ~ 43170042 (-)
LOC110492109 LOC106567177 other upstream 1022004 45613938 ~ 45627786 (-)
G1380431 NA other upstream 1108897 45705110 ~ 45705453 (-)
LOC110492748 ppdpf other upstream 1820347 46416560 ~ 46419996 (-)

Expression


Co-expression Network