LOC110492907


Basic Information

Item Value
gene id LOC110492907
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 45845557 ~ 45847474 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567369.2
ACCGAAACTGCGATTTATAAACACATGCAATACGGACCTGCAGAACTGCAATCAATCGTAGAAGAAATCAGAGTCATGTACCTGCCGTTCATAACCGTTGTTGGCCTTCTTGCGGTATTTACAGTTACATTAGGCGCTCCAGTTAATCAAACAGTTGGAATCAGTTGGAATGAAGTCACAGAGGGCTCTTTAAAACTAAATGAACTTGCTAAAAGACTCTTAACTGAGGAGCTCAGTCATTtgaaaaatgtggaaatagttgTCAAAGGGCCAAGAGTGCTGGTGGAAGCCACAGACAAATGTGATCCAAAAAACCTAAGAGCAGATTCAATGCCTTGTCTTAAGAagatggtttttgctctgaagaactacagtacagtatttgGGATAATTAGTCAGTTCAAGAATAACTGTGCAAAAACTGGAAAGATGGTGAACACAGTAGTGAAAAAACTCCTTTTAGACTTGAAGGAGCCCCATCCTCATTCAGAAGAGAAGTGGCAGGAAGTGAAGAGCTGGGAAGAGCCAGGACTGTGCCGTGACAATATTGAGAAGCTGTTCTCCTTCTCCATCCTCATGGCTCGGGTCTTTGCCCCTGGTGATCCTGCAAAACACATAATGGATTCGCCTAAATATTGTATCTAAAGCTGCGAAGCAGGCCACAATTGATTCGTCATCTGTGATCTGTTTCAGTATTAGACAACATAGTAGTAGATGGACATCTACATTAATTGTATGATCAATTTGATCAAAATAGTCTGAAATGACAAGTAACTTTTGTGGTGTTGTATGTTATTACAATGTTTCATAAACATTTCATTAACACACTTATATATCTGCCTGTGTTCCACTTTGGAACAGTTGTTTATATTTAGgaatgtatttatatatgtatCAATCCATATTAATATATTTATCAAATGTATGAAATTGTGAAGTAACTTAACATATTTTTAACATATTTAATTATTTAACTTATTTAATCTATGTTAACACCTATTTATCTGCCAATgtaatattttttaaacaaaatgtatttattattggATATAATTTTCCACGTGTTAAATtgcttaaaaaaataaacaacttTTAACTTTGAA

Function

NR:

description
uncharacterized protein LOC110492907

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567369.2 True 1103 mRNA 0.35 4 45845557 45847474

Neighbor

gene id symbol gene type direction distance location
LOC110492119 LOC106567187 coding downstream 2712 45836816 ~ 45842845 (-)
cd63 cd63 coding downstream 27341 45791659 ~ 45818216 (-)
LOC110492110 LOC106567179 coding downstream 187066 45653195 ~ 45658491 (-)
LOC110492109 LOC106567177 coding downstream 217771 45613938 ~ 45627786 (-)
racgap1 racgap1 coding downstream 275822 45562469 ~ 45569735 (-)
LOC110492121 spats2 coding upstream 37766 45885240 ~ 45909573 (-)
LOC110492124 LOC106572486 coding upstream 96389 45943863 ~ 45948699 (-)
LOC110492125 LOC106567338 coding upstream 114512 45961986 ~ 45964049 (-)
ocstamp ocstamp coding upstream 126892 45974366 ~ 45978025 (-)
slc13a3 slc13a3 coding upstream 131440 45978914 ~ 45991548 (-)
G1380483 NA non-coding downstream 29258 45816059 ~ 45816299 (-)
G1380451 NA non-coding downstream 98062 45746766 ~ 45747495 (-)
G1380437 NA non-coding downstream 115194 45730049 ~ 45730363 (-)
G1380432 NA non-coding downstream 138080 45706038 ~ 45707477 (-)
G1380431 NA non-coding downstream 140176 45705110 ~ 45705453 (-)
G1380518 pan2 non-coding upstream 16062 45863536 ~ 45865539 (-)
G1380578 NA non-coding upstream 167789 46015263 ~ 46015504 (-)
G1380579 NA non-coding upstream 168047 46015521 ~ 46015767 (-)
G1380601 NA non-coding upstream 184350 46031824 ~ 46032051 (-)
slc48a1a LOC106567162 other downstream 525179 45315947 ~ 45320378 (-)
plxna2 LOC106567158 other downstream 881075 44621739 ~ 44964691 (-)
G1378530 NA other downstream 1292010 44553014 ~ 44553547 (-)
LOC110492748 ppdpf other upstream 569086 46416560 ~ 46419996 (-)
LOC110492764 fkb1a other upstream 751223 46598697 ~ 46601691 (-)
LOC110492767 LOC106572444 other upstream 809993 46657459 ~ 46668762 (-)
LOC110491077 LOC106567232 other upstream 911813 46724969 ~ 46761466 (-)
G1381036 NA other upstream 1031137 46878611 ~ 46879146 (-)

Expression


Co-expression Network