LOC110492745 (mare1)


Basic Information

Item Value
gene id LOC110492745
gene name mare1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 46330854 ~ 46337487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036385.1
AAGATGGCTGTGAACGTTTACTCCACATCTGTGACCGGCGACAACCTTAGTCGCCATGATATGCTTTCTTGGATCAACGAGTCTGTACAGATGAACTACGCCAAGATTGAGCAGTTGTGCTCAGGTGCCGCTTACTGTCAGTTCATGGACATGCTTTTCCCTGGATGCATCCCTTTGAAGAAGGTAAAATTTCAGGCAAAACTAGAGACTGAGTTCCTCCACAACTTCAAACTTCTGCAGACCAGTTTTAAGAAGATTGGGGTTGACAAGATCATTCCTGTGGATAAATTGATAAAAGGCAAGTTCCAGGACAACTTTGAGTTTGTGCAGTGGTTCAAGAAATTATTTGATGCCAACTACGATGGAAAGGAGTATGACCCACTCGGTGCTCGCCAGGGCCAGGACACTGCTCCTACGCCCAACCCAGGGCAGGTCGCATCCAAGCCAAGAAAGCCCACCACTGTTCCACAGCTCCCCGCCTCTTATCAGACCAGCGGCGAGAGTCGCTCCCACGAGGTCTACAACGGCAGTAACCAAACCCCCGCCCAGGTCAGCAGGGAGTGCTTTGCGGAGGCCCGGAGGGGCAGAGGACGTGGAGAGGGTGGAGCTAGCCCAGGAGGTCAGTTCCCTGAAGGCCACTGTCCAggacatggagaaagagagagacttttATTTTGGAAAGCTGAGGTCCATTGAGGTCATCTGCCAAGAAGTGGATGGCGAGGCAGATACGACGATGCAGAAGATTATGGATGTTCTATACGCCACTGATGAGGGGTTTGTTATTCCTGATGCTGAAGGAGAAGAACCAGAAGAGTTCTGATGAAAATGGACACAACTGCAGTTCATACCTTAATCACACGCttttcaatacacacacacacaagtttgcATGTGCAACGTTCATACGCACTCTTTGGGTCTAATGAACATGCACTTACTCACACTGTGGATTAAGTTGTCTCTGGATTATACACTGCCTGCCACCTTGGTCCAAGTCTTTATTGGACcaagtgtttttttgttttttctgGACCATAAAATACATTTCAGAGACCCTGCTGATCCAGCCACCAGAGAAGAAGAACCCTGGATAAAATTCCAATGGGTCCTTATTTTCTGGGGGTTTTCTGCCTTGTTCTTATTCTGGCCTTTTCTGTGCCTTTCAATTTAGGCCTGTTACTTTTGAAATATGTTCAGGTTGTCTTTTTATTCCTTATATATTTCCAATTGACCTAAACAGTACTGTACTAGATTATTTTGATATGATATTTGCAAATATGAGTAAttcttaaatatatatatgaatGTTTACTCTGCCAATTGAAATGATTGTAATTTTTATGGTATGTTTACACACATTCATTATATACTTAAGAGTTAAACATTTGTGGTTTAGGCGATCAGCAtttgtatttagttttttttttatctccgcAGGTATTCATCACATTACTTTTTTGATTTTTCAATGAAATTAAGTGTTTTTATTGAGCACCTTAAATAAAAAAAGACTGTACTTCTTACTTAAAAGCAAAA
>XM_021567208.2
GTTCAGCTACCTTCTAACCGTACAACAAGAGCCAAGAGGAAGGAACAAGGCACGTAAGAATTAAAACGCCGGTGAACGGCGAGAAAGTTTGGTGTATCCACAAGTTTTAACCTTTTTGTAATTTGATTCAACCAGTGGAAGACTAAGAAAATAAGATGGCTGTGAACGTTTACTCCACATCTGTGACCGGCGACAACCTTAGTCGCCATGATATGCTTTCTTGGATCAACGAGTCTGTACAGATGAACTACGCCAAGATTGAGCAGTTGTGCTCAGGTGCCGCTTACTGTCAGTTCATGGACATGCTTTTCCCTGGATGCATCCCTTTGAAGAAGGTAAAATTTCAGGCAAAACTAGAGACTGAGTTCCTCCACAACTTCAAACTTCTGCAGACCAGTTTTAAGAAGATTGGGGTTGACAAGATCATTCCTGTGGATAAATTGATAAAAGGCAAGTTCCAGGACAACTTTGAGTTTGTGCAGTGGTTCAAGAAATTATTTGATGCCAACTACGATGGAAAGGAGTATGACCCACTCGGTGCTCGCCAGGGCCAGGACACTGCTCCTACGCCCAACCCAGGGCAGGTCGCATCCAAGCCAAGAAAGCCCACCACTGTACAGTTCCACAGCTCCCCGCCTCTTATCAGACCAGCGGCGAGAGTCGCTCCCACGAGGTCTACAACGGCAGTAACCAAACCCCCGCCCAGGTCAGCAGGGAGTGCTTTGCGGAGGCCCGGAGGGGCAGAGGACGTGGAGAGGGTGGAGCTAGCCCAGGAGGTCAGTTCCCTGAAGGCCACTGTCCAggacatggagaaagagagagacttttATTTTGGAAAGCTGAGGTCCATTGAGGTCATCTGCCAAGAAGTGGATGGCGAGGCAGATACGACGATGCAGAAGATTATGGATGTTCTATACGCCACTGATGAGGGGTTTGTTATTCCTGATGCTGAAGGAGAAGAACCAGAAGAGTTCTGATGAAAATGGACACAACTGCAGTTCATACCTTAATCACACGCttttcaatacacacacacacaagtttgcATGTGCAACGTTCATACGCACTCTTTGGGTCTAATGAACATGCACTTACTCACACTGTGGATTAAGTTGTCTCTGGATTATACACTGCCTGCCACCTTGGTCCAAGTCTTTATTGGACcaagtgtttttttgttttttctgGACCATAAAATACATTTCAGAGACCCTGCTGATCCAGCCACCAGAGAAGAAGAACCCTGGATAAAATTCCAATGGGTCCTTATTTTCTGGGGGTTTTCTGCCTTGTTCTTATTCTGGCCTTTTCTGTGCCTTTCAATTTAGGCCTGTTACTTTTGAAATATGTTCAGGTTGTCTTTTTATTCCTTATATATTTCCAATTGACCTAAACAGTACTGTACTAGATTATTTTGATATGATATTTGCAAATATGAGTAAttcttaaatatatatatgaatGTTTACTCTGCCAATTGAAATGATTGTAATTTTTATGGTATGTTTACACACATTCATTATATACTTAAGAGTTAAACATTTGTGGTTTAGGCGATCAGCAtttgtatttagttttttttttatctccgcAGGTATTCATCACATTACTTTTTTGATTTTTCAATGAAATTAAGTGTTTTTATTGAGCACCTTAAATAAAAAAAGACTGTACTTCTTACTTAAAAGCAAAA
>XM_021567207.2
CGTTAATGTTCAGCTACCTTCTAACCGTACAACAAGAGCCAAGAGGAAGGAACAAGGCACGTAAGAATTAAAACGCCGGTGAACGGCGAGAAAGTTTGGTGTATCCACAAGTTTTAACCTTTTTGTAATTTGATTCAACCAGTGGAAGACTAAGAAAATCTAGAAGATGGCTGTGAACGTTTACTCCACATCTGTGACCGGCGACAACCTTAGTCGCCATGATATGCTTTCTTGGATCAACGAGTCTGTACAGATGAACTACGCCAAGATTGAGCAGTTGTGCTCAGGTGCCGCTTACTGTCAGTTCATGGACATGCTTTTCCCTGGATGCATCCCTTTGAAGAAGGTAAAATTTCAGGCAAAACTAGAGACTGAGTTCCTCCACAACTTCAAACTTCTGCAGACCAGTTTTAAGAAGATTGGGGTTGACAAGATCATTCCTGTGGATAAATTGATAAAAGGCAAGTTCCAGGACAACTTTGAGTTTGTGCAGTGGTTCAAGAAATTATTTGATGCCAACTACGATGGAAAGGAGTATGACCCACTCGGTGCTCGCCAGGGCCAGGACACTGCTCCTACGCCCAACCCAGGGCAGGTCGCATCCAAGCCAAGAAAGCCCACCACTGTACAGTTCCACAGCTCCCCGCCTCTTATCAGACCAGCGGCGAGAGTCGCTCCCACGAGGTCTACAACGGCAGTAACCAAACCCCCGCCCAGGTCAGCAGGGAGTGCTTTGCGGAGGCCCGGAGGGGCAGAGGACGTGGAGAGGGTGGAGCTAGCCCAGGAGGTCAGTTCCCTGAAGGCCACTGTCCAggacatggagaaagagagagacttttATTTTGGAAAGCTGAGGTCCATTGAGGTCATCTGCCAAGAAGTGGATGGCGAGGCAGATACGACGATGCAGAAGATTATGGATGTTCTATACGCCACTGATGAGGGGTTTGTTATTCCTGATGCTGAAGGAGAAGAACCAGAAGAGTTCTGATGAAAATGGACACAACTGCAGTTCATACCTTAATCACACGCttttcaatacacacacacacaagtttgcATGTGCAACGTTCATACGCACTCTTTGGGTCTAATGAACATGCACTTACTCACACTGTGGATTAAGTTGTCTCTGGATTATACACTGCCTGCCACCTTGGTCCAAGTCTTTATTGGACcaagtgtttttttgttttttctgGACCATAAAATACATTTCAGAGACCCTGCTGATCCAGCCACCAGAGAAGAAGAACCCTGGATAAAATTCCAATGGGTCCTTATTTTCTGGGGGTTTTCTGCCTTGTTCTTATTCTGGCCTTTTCTGTGCCTTTCAATTTAGGCCTGTTACTTTTGAAATATGTTCAGGTTGTCTTTTTATTCCTTATATATTTCCAATTGACCTAAACAGTACTGTACTAGATTATTTTGATATGATATTTGCAAATATGAGTAAttcttaaatatatatatgaatGTTTACTCTGCCAATTGAAATGATTGTAATTTTTATGGTATGTTTACACACATTCATTATATACTTAAGAGTTAAACATTTGTGGTTTAGGCGATCAGCAtttgtatttagttttttttttatctccgcAGGTATTCATCACATTACTTTTTTGATTTTTCAATGAAATTAAGTGTTTTTATTGAGCACCTTAAATAAAAAAAGACTGTACTTCTTACTTAAAAGCAAAA
>XM_021567209.2
CGTTAATGTTCAGCTACCTTCTAACCGTACAACAAGAGCCAAGAGGAAGGAACAAGGCACGTAAGAATTAAAACGCCGGTGAACGGCGAGAAAGTTTGGTGTATCCACAAGTTTTAACCTTTTTGTAATTTGATTCAACCAGTGGAAGACTAAGAAAATCTAGAAGATGGCTGTGAACGTTTACTCCACATCTGTGACCGGCGACAACCTTAGTCGCCATGATATGCTTTCTTGGATCAACGAGTCTGTACAGATGAACTACGCCAAGATTGAGCAGTTGTGCTCAGGTGCCGCTTACTGTCAGTTCATGGACATGCTTTTCCCTGGATGCATCCCTTTGAAGAAGGTAAAATTTCAGGCAAAACTAGAGACTGAGTTCCTCCACAACTTCAAACTTCTGCAGACCAGTTTTAAGAAGATTGGGGTTGACAAGATCATTCCTGTGGATAAATTGATAAAAGGCAAGTTCCAGGACAACTTTGAGTTTGTGCAGTGGTTCAAGAAATTATTTGATGCCAACTACGATGGAAAGGAGTATGACCCACTCGGTGCTCGCCAGGGCCAGGACACTGCTCCTACGCCCAACCCAGGGCAGGTCGCATCCAAGCCAAGAAAGCCCACCACTGCTCCCACGAGGTCTACAACGGCAGTAACCAAACCCCCGCCCAGGTCAGCAGGGAGTGCTTTGCGGAGGCCCGGAGGGGCAGAGGACGTGGAGAGGGTGGAGCTAGCCCAGGAGGTCAGTTCCCTGAAGGCCACTGTCCAggacatggagaaagagagagacttttATTTTGGAAAGCTGAGGTCCATTGAGGTCATCTGCCAAGAAGTGGATGGCGAGGCAGATACGACGATGCAGAAGATTATGGATGTTCTATACGCCACTGATGAGGGGTTTGTTATTCCTGATGCTGAAGGAGAAGAACCAGAAGAGTTCTGATGAAAATGGACACAACTGCAGTTCATACCTTAATCACACGCttttcaatacacacacacacaagtttgcATGTGCAACGTTCATACGCACTCTTTGGGTCTAATGAACATGCACTTACTCACACTGTGGATTAAGTTGTCTCTGGATTATACACTGCCTGCCACCTTGGTCCAAGTCTTTATTGGACcaagtgtttttttgttttttctgGACCATAAAATACATTTCAGAGACCCTGCTGATCCAGCCACCAGAGAAGAAGAACCCTGGATAAAATTCCAATGGGTCCTTATTTTCTGGGGGTTTTCTGCCTTGTTCTTATTCTGGCCTTTTCTGTGCCTTTCAATTTAGGCCTGTTACTTTTGAAATATGTTCAGGTTGTCTTTTTATTCCTTATATATTTCCAATTGACCTAAACAGTACTGTACTAGATTATTTTGATATGATATTTGCAAATATGAGTAAttcttaaatatatatatgaatGTTTACTCTGCCAATTGAAATGATTGTAATTTTTATGGTATGTTTACACACATTCATTATATACTTAAGAGTTAAACATTTGTGGTTTAGGCGATCAGCAtttgtatttagttttttttttatctccgcAGGTATTCATCACATTACTTTTTTGATTTTTCAATGAAATTAAGTGTTTTTATTGAGCACCTTAAATAAAAAAAGACTGTACTTCTTACTTAAAAGCAAAA

Function

NR:

description
microtubule-associated protein RP/EB family member 1-like

GO:

id name namespace
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10436 MAPRE; microtubule-associated protein, RP/EB family

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036385.1 False 1539 mRNA 0.43 7 46330854 46336854
XM_021567208.2 False 1696 mRNA 0.43 8 46330854 46337480
XM_021567207.2 False 1707 mRNA 0.42 8 46330854 46337487
XM_021567209.2 True 1659 mRNA 0.42 7 46330854 46337487

Neighbor

gene id symbol gene type direction distance location
LOC110492744 LOC106567213 coding downstream 228 46317844 ~ 46330626 (-)
LOC110492742 LOC106567211 coding downstream 37415 46287237 ~ 46293439 (-)
LOC110492740 LOC106567210 coding downstream 46749 46280328 ~ 46284105 (-)
LOC110492134 LOC106567201 coding downstream 165293 46151597 ~ 46165561 (-)
peds1 tm189 coding downstream 196108 46129671 ~ 46134746 (-)
LOC110492746 LOC106567215 coding upstream 3593 46341080 ~ 46371222 (-)
LOC110492748 ppdpf coding upstream 79975 46416560 ~ 46419996 (-)
LOC110492750 LOC106567218 coding upstream 85665 46423152 ~ 46439814 (-)
LOC110492749 LOC106567344 coding upstream 105436 46442923 ~ 46448034 (-)
LOC110492754 LOC106567220 coding upstream 140829 46478316 ~ 46486506 (-)
G1380722 NA non-coding downstream 46072 46284545 ~ 46284782 (-)
G1380721 LOC100701228 non-coding downstream 53367 46277225 ~ 46277487 (-)
G1380720 NA non-coding downstream 53816 46276708 ~ 46277038 (-)
G1380719 LOC106567209 non-coding downstream 55920 46274086 ~ 46274934 (-)
G1380682 NA non-coding downstream 77715 46248735 ~ 46253139 (-)
G1380741 NA non-coding upstream 1359 46338846 ~ 46339083 (-)
G1380786 NA non-coding upstream 82680 46420167 ~ 46420441 (-)
G1380768 NA non-coding upstream 102573 46440060 ~ 46517372 (-)
G1380817 NA non-coding upstream 149663 46487150 ~ 46548798 (-)
LOC110492758 LOC106567225 non-coding upstream 186911 46524093 ~ 46531221 (-)
G1380431 NA other downstream 625401 45705110 ~ 45705453 (-)
LOC110492109 LOC106567177 other downstream 703156 45613938 ~ 45627786 (-)
slc48a1a LOC106567162 other downstream 1010476 45315947 ~ 45320378 (-)
plxna2 LOC106567158 other downstream 1366372 44621739 ~ 44964691 (-)
G1378530 NA other downstream 1777307 44553014 ~ 44553547 (-)
LOC110492764 fkb1a other upstream 261210 46598697 ~ 46601691 (-)
LOC110492767 LOC106572444 other upstream 319980 46657459 ~ 46668762 (-)
LOC110491077 LOC106567232 other upstream 421800 46724969 ~ 46761466 (-)
G1381036 NA other upstream 541124 46878611 ~ 46879146 (-)

Expression


Co-expression Network