LOC110492784


Basic Information

Item Value
gene id LOC110492784
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 47040588 ~ 47042845 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469080.2
ACCAGCTCCAGAGGTCtatgtcaccggtcttctaggtGTCACTGAACGGGACTCATTACCACCAACActggactgtcttgtctcattacacacacctggttcccattccccctgattagaatgtgtatatgtgtgcccTCTGTTACCAtggtcttgtgagtacctgtgctgtcgTATCGGCTTACATGCTACGTGTTATTGGTTTACGGGGTCACGGCCCGTGTTTGAGGTTTACACCGTACACTTTTGTTTGGGtggagaaaataaaaaaacactttcTTATTCCTGCTCCTGTCTCCGATCATTATACAACGTGACACCATGGTGCTgtaaagaaagctctgctgttgggacagctttatTATGGAGGATTTGGACTACTTTGAGCAGTTCCCAGGGATGAAGAGGAAGCGTTGACTACGCCGGTGCCAGAGATGGTGAAGCCCAGTCATTCTTCAACGAGAGCTCGACTTCGATGTAACGACTGCCAATGACAGACCCATTTCTCCTCTCCCAGCCAACCTTCCATCAGCAGATGGAACACTGTCCAGTACCACTGTATCCCTGGGTGAACAATAACCTCATGTGCCTTCCACAGCACAAATCAATGAAGTGCTATCCATACCTGTACCATCCCAAGTCAACCAACTGACAACTGAACCTTCACCGGAACTGGACTGTGAAATGGCGAAACTCAACGACCCAGGAGGAGCCCAAATATAGAAGTACCCCCACACCTCTGAGCTTGTCTCCAACATCACTCCACAGCAGCATGGCTGAACACTTAGAGGCTGAGGAGGAGCAGGACGGAGGAACCTCCACCCTGAATCAGAGAACCACACATTGAACCTGAGCCACCTCACACAGAGATCCAAGCCAACATGCCTTCGCTGGAAGGTGTTTTATATCAGTGTGCATCCCGCAACACCAGATGTAGTGGCTCCCAGGCAGATTGGGAAGAGTTTCCCGGTGTAGTGGCCACCTATCTTTTGAAGTCACAGACAACACCTCAGATTCATCCatgactagggttgcacattttggggaatattcagaggtggaaactttccttGGGAATATGTGAACTAATGGAAATATgggaattaatattaataccaatttaaatatagatgtttttttgcattgggtATATTTACCATATTTGGAgacaaacaaacatttgaccttatcataagtagacataattgcaaattatcaaatccttccaatagaaaaatatatatactttagttaagaatttaactttaattaaattaGCTGACTcctcacatgggatgatttcactgaacaacaaaagggaatatctaatgatccatcgcatctcccaaaaacgttctcaacatacatctgtaaaattatagtctagaaactaaagctttggttgtcttcctctcaggcttccatgtctcctccctggacctcctcaatgtccacct

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572379 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469080.2 True 1457 mRNA 0.45 4 47040588 47042845

Neighbor

gene id symbol gene type direction distance location
LOC110492783 LOC106567244 coding downstream 5887 47029557 ~ 47034701 (-)
LOC110492780 NA coding downstream 25527 47013585 ~ 47015061 (-)
LOC110492777 LOC106567238 coding downstream 66005 46945241 ~ 46974583 (-)
LOC110492774 LOC106567235 coding downstream 244753 46777670 ~ 46795835 (-)
LOC110492773 timm17b coding downstream 270039 46765870 ~ 46770549 (-)
LOC110492137 LOC106567248 coding upstream 39093 47081938 ~ 47089563 (-)
LOC110492139 s38a3 coding upstream 46957 47089802 ~ 47103227 (-)
LOC110492147 LOC106572391 coding upstream 323387 47366232 ~ 47390987 (-)
LOC110492148 LOC106567259 coding upstream 366390 47409235 ~ 47908274 (-)
thap3 LOC106567262 coding upstream 875312 47918157 ~ 47927478 (-)
G1381106 NA non-coding downstream 15249 47025081 ~ 47025339 (-)
G1381100 NA non-coding downstream 30094 47005351 ~ 47010494 (-)
G1381022 NA non-coding downstream 95618 46944017 ~ 46944970 (-)
G1381112 NA non-coding upstream 1768 47044613 ~ 47044824 (-)
G1381123 NA non-coding upstream 15998 47058843 ~ 47060965 (-)
G1381233 NA non-coding upstream 169169 47212014 ~ 47212221 (-)
G1381236 NA non-coding upstream 172542 47215387 ~ 47215591 (-)
G1381036 NA other downstream 161442 46878611 ~ 46879146 (-)
LOC110491077 LOC106567232 other downstream 279122 46724969 ~ 46761466 (-)
LOC110492767 LOC106572444 other downstream 371994 46657459 ~ 46668762 (-)
LOC110492764 fkb1a other downstream 439213 46598697 ~ 46601691 (-)
LOC110492748 ppdpf other downstream 620710 46416560 ~ 46419996 (-)
G1382721 NA other upstream 900534 47943379 ~ 47946222 (-)
G1382894 mitf other upstream 1239368 48282213 ~ 48312958 (-)
LOC110492187 LOC106936674 other upstream 2141463 49179653 ~ 49196706 (-)

Expression


Co-expression Network