LOC110492170 (eif4e3)


Basic Information

Item Value
gene id LOC110492170
gene name eif4e3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 48372037 ~ 48383460 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947113.1
GTGGAAGACTGTAGAAAAAAATATCCACTACGCGCGCGGCACCTAATCTGAACACGTAAGGATCAACAAAAACAATCTAAAGCAATGAATAATGAAGGGCATGCTCCGTATGTCCCTTGACCTATCCTTAAACCCCAAAAACAAGGGAGCTAATCAAACATTCCGTAGTAAGGTATTATTAAGGATACGTTTATTGATATCCTTCATATGCGCTGAAATTGAAAAATAAAGGGTACTGACCAACAATTGAAATTAAGTCCTGTTTCCTAGTGTGGATTTCGCCTGCCGTTTATGACAAGAACGTTTGGCCTGCAGACAGCTAGACGTCGTCGTTTTACTGATGTTGTGGCGCCAGACCGGTGAAGCTACGAATGAGTCAGCAAAGAAATGGCCGTTCCTGCTGTCCCAACCCTGCAGCTGAACAACACAGTTAGTCAAAACTCCGCTGAACGTAACATCCATATTGACGAAAGAGAATTGGAGAACATCACGAACAACGATGGAAACGGCACCCTCCCATTACATTCTCCGTGGACTTTTTGGCTTGATAGATCTTTACCAGGAACAACCGCAGCAGAATGTGAATCAGGTCTGAAAAAAATCTACACTGTGCAAACAGTTCAGAGCTTTTGGAGCGTGTACAACAATATACCTGGAGTTTCCAGTTTACCACTGAGATGTAGCTATCActtaatgagaggagagagaagaccaCTCTGGGAAGAAGAGAGTAATGCAAAGGGGGGAGTTTGGAAAATGAAAGTACCCAAAGAAAACACTCCTGCTGTATGGAAGGAGTTACTGTTAGCCACTATTGGGGAGCAATTCACTGATTACTGTGCTTCAGaggatgaGGTGGTTGGTGTTAGTGTTAGCATACGAGACAGAGAAGATGTTGTCCAAATCTGGAATGGAATTGCCTCGTTTGCTAATGAAGCAAACGTCCTAGGACGGATCTATGAACTTCTTCCACAGATAACTTTTAAGGCAGTATTTTATAAGCCACATGAGGAGCATCATGCCTTCGAAGGAGGTCGCCCAAGACATTAGCACGCTTTGCACATTTTACACTTTGTTGTTTTTGGTCTTCGAAATGGACTGAATTGTCCCCTAATCTGAGCTCTACTGTCTTTTGTAAATGTGTTATACAATTACTTCAGTTTGGGCAGACAGAAAATATAATAGCTGGGGCTTCATTTTAGGATGACTGATAGACATGTACTTTAGTGTTTGTTTTTTATACAAAGATATTTAGCTAAAACTGAAGAGGACAATAGTTGATAATGTATACATATTTGTTTTTACCACATTTGATCTCAACAGTGCAATTTTACCAGAGCCTTTTATTTGTTATCACGGGTTCCAGATCTCACAATATATGTTCAGTATGTAAGGGATTTACATTGTTACCTTATTCTAGAATGAATGAAGAGTATTTTCCTCAAGACAGTAATATTCATATGGTTTTATGCAAAAATGTTGCACATtctcaatgtttttttgtttggtagtttttgttgttttttggggtTAGGGGAAAGAAAGCTGTTAAATGTTACTTGTTGTTGGATTTGTAAAGTGACACCAACTTTTGTACAAAAACAAAATCAGAAAATGTTACTAGAAAAAATATATGCAGTAGTTTACCCAGAGTGTTTTTGTAATAGCGGTGGATCATGGACAAACACACTCAATATTGTTTTTTCCGAAATGCACAAGCCTTTTTCATTTTTACTATAATTAACAGGATCTCTATTACTGTTTCTTCAGTTCACTGAGGCTAATTTCTAAGTTGTGCGTGCACATGTTTATTATAAGCTCCATGAAAGGGATTTGATcaagaaatattacatttatatcATGAATATTATTCTCATTAAAGTCCTACAAACTTTAAAAGAAACCcttcttaaaataaataaaaatgtatgctGTATGAACCGTGCTTTGAGTTGAATGAGTACTTCTCTTTACCAAAACCCTTTCTTAACCCTCAGTGGTGTGAGAGTGCATATTCCCTGCCAAGCATTTATGTTTTGTAACCTAGTAATTGTTATCAGATGCCATCTCTGTAGTTGATGAATGTCCTTCCCTGTGACTCAGGTCATCCATGTTCAAACACCAAGATTGATTAGTCTCCTAGAGAGAAACGAATAATCTTACAGACTGTATAGCTGGGTATTGTTGCTGTTTTTAATGAAAGTATTTGTTTTAGTAAGATGAGATCTCAACTTGAGTCTTTTGAATGGTGCCTTGTGTTCCCCTCGGGTTTCGTTCTTGAATGTTGTTTATTTTCAACATATTGAACCAgtcaaatgtaaaataaatatttttgtcTGATTTTGAtatatgaaaaaataaaaatgcaaaaCATGTA
>XR_002468966.2
GGTGGAAGACTGTAGAAAAAAATATCCACTACGCGCGCGGCACCTAATCTGAACACGTAAGGATCAACAAAAACAATCTAAAGCAATGAATAATGAAGGGCATGCTCCGTATGTCCCTTGACCTATCCTTAAACCCCAAAAACAAGGGAGCTAATCAAACATTCCGTAGTAAGGTATTATTAAGGATACGTTTATTGATATCCTTCATATGCGCTGAAATTGAAAAATAAAGGGTACTGACCAACAATTGAAATTAAGTGTGGATTTCGCCTGCCGTTTATGACAAGAACGTTTGGCCTGCAGACAGCTAGACGTCGTCGTTTTACTGATGTTGTGGCGCCAGACCGGTGAAGCTACGAATGAGTCAGCAAAGTAGGCACTTTACACCTATTTAATCAAAAGGTGAAACGAGATATTTTAAAAACAATCAAATCGATTATTTTTACAACCCAGGAAATGGCCGTTCCTGCTGTCCCAACCCTGCAGCTGAACAACACAGTTAGTCAAAACTCCGCTGAACGTAACATCCATATTGACGAAAGAGAATTGGAGAACATCACGAACAACGATGGAAACGGCACCCTCCCATTACATTCTCCGTGGACTTTTTGGCTTGATAGATCTTTACCAGGAACAACCGCAGCAGAATGTGAATCAGGTCTGAAAAAAATCTACACTGTGCAAACAGTTCAGAGCTTTTGGAGCGTGTACAACAATATACCTGGAGTTTCCAGTTTACCACTGAGATGTAGCTATCActtaatgagaggagagagaagaccaCTCTGGGAAGAAGAGAGTAATGCAAAGGGGGGAGTTTGGAAAATGAAAGTACCCAAAGAAAACACTCCTGCTGTATGGAAGGAGTTACTGTTAGCCACTATTGGGGAGCAATTCACTGATTACTGTGCTTCAGaggatgaGGTGGTTGGTGTTAGTGTTAGCATACGAGACAGAGAAGATGTTGTCCAAATCTGGAATGGAATTGCCTCGTTTGCTAATGAAGCAAACGTCCTAGGACGGATCTATGAACTTCTTCCACAGATAACTTTTAAGGCAGTATTTTATAAGCCACATGAGGAGCATCATGCCTTCGAAGGAGGTCGCCCAAGACATTAGCACGCTTTGCACATTTTACACTTTGTTGTTTTTGGTCTTCGAAATGGACTGAATTGTCAGACAGAAAATATAATAGCTGGGGCTTCATTTTAGGATGACTGATAGACATGTACTTTAGTGTTTGTTTTTTATACAAAGATATTTAGCTAAAACTGAAGAGGACAATAGTTGATAATGTATACATATTTGTTTTTACCACATTTGATCTCAACAGTGCAATTTTACCAGAGCCTTTTATTTGTTATCACGGGTTCCAGATCTCACAATATATGTTCAGTATGTAAGGGATTTACATTGTTACCTTATTCTAGAATGAATGAAGAGTATTTTCCTCAAGACAGTAATATTCATATGGTTTTATGCAAAAATGTTGCACATtctcaatgtttttttgtttggtagtttttgttgttttttggggtTAGGGGAAAGAAAGCTGTTAAATGTTACTTGTTGTTGGATTTGTAAAGTGACACCAACTTTTGTACAAAAACAAAATCAGAAAATGTTACTAGAAAAAATATATGCAGTAGTTTACCCAGAGTGTTTTTGTAATAGCGGTGGATCATGGACAAACACACTCAATATTGTTTTTTCCGAAATGCACAAGCCTTTTTCATTTTTACTATAATTAACAGGATCTCTATTACTGTTTCTTCAGTTCACTGAGGCTAATTTCTAAGTTGTGCGTGCACATGTTTATTATAAGCTCCATGAAAGGGATTTGATcaagaaatattacatttatatcATGAATATTATTCTCATTAAAGTCCTACAAACTTTAAAAGAAACCcttcttaaaataaataaaaatgtatgctGTATGAACCGTGCTTTGAGTTGAATGAGTACTTCTCTTTACCAAAACCCTTTCTTAACCCTCAGTGGTGTGAGAGTGCATATTCCCTGCCAAGCATTTATGTTTTGTAACCTAGTAATTGTTATCAGATGCCATCTCTGTAGTTGATGAATGTCCTTCCCTGTGACTCAGGTCATCCATGTTCAAACACCAAGATTGATTAGTCTCCTAGAGAGAAACGAATAATCTTACAGACTGTATAGCTGGGTATTGTTGCTGTTTTTAATGAAAGTATTTGTTTTAGTAAGATGAGATCTCAACTTGAGTCTTTTGAATGGTGCCTTGTGTTCCCCTCGGGTTTCGTTCTTGAATGTTGTTTATTTTCAACATATTGAACCAgtcaaatgtaaaataaatatttttgtcTGATTTTGAtatatgaaaaaataaaaatgcaaaaCATGTA
>XM_021566238.2
GGGTGGAAGACTGTAGAAAAAAATATCCACTACGCGCGCGGCACCTAATCTGAACACGTAAGGATCAACAAAAACAATCTAAAGCAATGAATAATGAAGGGCATGCTCCGTATGTCCCTTGACCTATCCTTAAACCCCAAAAACAAGGGAGCTAATCAAACATTCCGTAGTAAGGTATTATTAAGGATACGTTTATTGATATCCTTCATATGCGCTGAAATTGAAAAATAAAGGGTACTGACCAACAATTGAAATTAAGTGTGGATTTCGCCTGCCGTTTATGACAAGAACGTTTGGCCTGCAGACAGCTAGACGTCGTCGTTTTACTGATGTTGTGGCGCCAGACCGGTGAAGCTACGAATGAGTCAGCAAAGAAATGGCCGTTCCTGCTGTCCCAACCCTGCAGCTGAACAACACAGTTAGTCAAAACTCCGCTGAACGTAACATCCATATTGACGAAAGAGAATTGGAGAACATCACGAACAACGATGGAAACGGCACCCTCCCATTACATTCTCCGTGGACTTTTTGGCTTGATAGATCTTTACCAGGAACAACCGCAGCAGAATGTGAATCAGGTCTGAAAAAAATCTACACTGTGCAAACAGTTCAGAGCTTTTGGAGCGTGTACAACAATATACCTGGAGTTTCCAGTTTACCACTGAGATGTAGCTATCActtaatgagaggagagagaagaccaCTCTGGGAAGAAGAGAGTAATGCAAAGGGGGGAGTTTGGAAAATGAAAGTACCCAAAGAAAACACTCCTGCTGTATGGAAGGAGTTACTGTTAGCCACTATTGGGGAGCAATTCACTGATTACTGTGCTTCAGaggatgaGGTGGTTGGTGTTAGTGTTAGCATACGAGACAGAGAAGATGTTGTCCAAATCTGGAATGGAATTGCCTCGTTTGCTAATGAAGCAAACGTCCTAGGACGGATCTATGAACTTCTTCCACAGATAACTTTTAAGGCAGTATTTTATAAGCCACATGAGGAGCATCATGCCTTCGAAGGAGGTCGCCCAAGACATTAGCACGCTTTGCACATTTTACACTTTGTTGTTTTTGGTCTTCGAAATGGACTGAATTGTCCCCTAATCTGAGCTCTACTGTCTTTTGTAAATGTGTTATACAATTACTTCAGTTTGGGCAGACAGAAAATATAATAGCTGGGGCTTCATTTTAGGATGACTGATAGACATGTACTTTAGTGTTTGTTTTTTATACAAAGATATTTAGCTAAAACTGAAGAGGACAATAGTTGATAATGTATACATATTTGTTTTTACCACATTTGATCTCAACAGTGCAATTTTACCAGAGCCTTTTATTTGTTATCACGGGTTCCAGATCTCACAATATATGTTCAGTATGTAAGGGATTTACATTGTTACCTTATTCTAGAATGAATGAAGAGTATTTTCCTCAAGACAGTAATATTCATATGGTTTTATGCAAAAATGTTGCACATtctcaatgtttttttgtttggtagtttttgttgttttttggggtTAGGGGAAAGAAAGCTGTTAAATGTTACTTGTTGTTGGATTTGTAAAGTGACACCAACTTTTGTACAAAAACAAAATCAGAAAATGTTACTAGAAAAAATATATGCAGTAGTTTACCCAGAGTGTTTTTGTAATAGCGGTGGATCATGGACAAACACACTCAATATTGTTTTTTCCGAAATGCACAAGCCTTTTTCATTTTTACTATAATTAACAGGATCTCTATTACTGTTTCTTCAGTTCACTGAGGCTAATTTCTAAGTTGTGCGTGCACATGTTTATTATAAGCTCCATGAAAGGGATTTGATcaagaaatattacatttatatcATGAATATTATTCTCATTAAAGTCCTACAAACTTTAAAAGAAACCcttcttaaaataaataaaaatgtatgctGTATGAACCGTGCTTTGAGTTGAATGAGTACTTCTCTTTACCAAAACCCTTTCTTAACCCTCAGTGGTGTGAGAGTGCATATTCCCTGCCAAGCATTTATGTTTTGTAACCTAGTAATTGTTATCAGATGCCATCTCTGTAGTTGATGAATGTCCTTCCCTGTGACTCAGGTCATCCATGTTCAAACACCAAGATTGATTAGTCTCCTAGAGAGAAACGAATAATCTTACAGACTGTATAGCTGGGTATTGTTGCTGTTTTTAATGAAAGTATTTGTTTTAGTAAGATGAGATCTCAACTTGAGTCTTTTGAATGGTGCCTTGTGTTCCCCTCGGGTTTCGTTCTTGAATGTTGTTTATTTTCAACATATTGAACCAgtcaaatgtaaaataaatatttttgtcTGATTTTGAtatatgaaaaaataaaaatgcaaaaCATGTA

Function

symbol description
eif4e3 Predicted to enable RNA 7-methylguanosine cap binding activity and translation initiation factor activity. Predicted to act upstream of or within regulation of translation and translational initiation. Predicted to be part of eukaryotic translation initiation factor 4F complex and mRNA cap binding activity complex. Orthologous to human EIF4E3 (eukaryotic translation initiation factor 4E family member 3).

NR:

description
eukaryotic translation initiation factor 4E type 3-like isoform X1

GO:

id name namespace
GO:0006413 translational initiation biological_process
GO:0006417 regulation of translation biological_process
GO:0005845 mRNA cap binding complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003743 translation initiation factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947113.1 False 2377 mRNA 0.37 9 48372037 48383458
XR_002468966.2 False 2387 mRNA 0.37 9 48372037 48383459
XM_021566238.2 True 2366 mRNA 0.37 9 48372037 48383460

Neighbor

gene id symbol gene type direction distance location
LOC110492168 foxp1 coding downstream 92 48348467 ~ 48371945 (-)
LOC110492167 NA coding downstream 24244 48343132 ~ 48347885 (-)
LOC110492165 LOC106567279 coding downstream 29020 48333920 ~ 48343017 (-)
LOC110492160 frmd4b coding downstream 99748 48242058 ~ 48272289 (-)
LOC110492161 lmod3 coding downstream 130541 48232398 ~ 48241496 (-)
LOC110492173 LOC106567285 coding upstream 100010 48483470 ~ 48521507 (-)
LOC110492176 LOC106567286 coding upstream 141582 48525042 ~ 48533176 (-)
LOC110491085 NA coding upstream 163720 48547180 ~ 48548167 (-)
LOC110492177 LOC106567287 coding upstream 266713 48650173 ~ 48970488 (-)
LOC110492180 LOC105022745 coding upstream 650869 49034329 ~ 49040181 (-)
G1382938 mitf non-coding downstream 40112 48327946 ~ 48331925 (-)
G1382937 NA non-coding downstream 44455 48327177 ~ 48327582 (-)
G1382935 NA non-coding downstream 45665 48326062 ~ 48326372 (-)
G1382933 mitf non-coding downstream 47899 48323819 ~ 48324138 (-)
G1382925 LOC106567283 non-coding upstream 7519 48390979 ~ 48393246 (-)
G1382997 NA non-coding upstream 63759 48447219 ~ 48447883 (-)
G1383073 NA non-coding upstream 213018 48596478 ~ 48614348 (-)
G1383391 NA non-coding upstream 675388 49058848 ~ 49059230 (-)
G1382894 mitf other downstream 59079 48282213 ~ 48312958 (-)
G1382721 NA other downstream 425815 47943379 ~ 47946222 (-)
LOC110492148 LOC106567259 other downstream 923172 47409235 ~ 47908274 (-)
LOC110492137 LOC106567248 other downstream 1282507 47081938 ~ 47089563 (-)
G1381036 NA other downstream 1492891 46878611 ~ 46879146 (-)
LOC110492187 LOC106936674 other upstream 800848 49179653 ~ 49196706 (-)
LOC110491086 LOC106566907 other upstream 1219658 49576512 ~ 49719539 (-)
G1384875 NA other upstream 1681361 50064821 ~ 50065817 (-)
G1385645 NA other upstream 2672171 51055631 ~ 51056061 (-)
G1385888 NA other upstream 2707185 51090645 ~ 51128648 (-)

Expression


Co-expression Network