Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492192 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 49378715 ~ 49390275 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nonclassical MHC class I antigen |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036947145.1 | True | 1834 | mRNA | 0.40 | 8 | 49378715 | 49390275 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492183 | LOC106566912 | coding | upstream | 4320 | 49260351 ~ 49374395 (+) |
| LOC110492182 | LOC106566913 | coding | upstream | 120681 | 49202107 ~ 49258042 (+) |
| ru1c | NA | coding | upstream | 176747 | 49197344 ~ 49201968 (+) |
| LOC110492184 | pacsin1 | coding | upstream | 232019 | 49085325 ~ 49146696 (+) |
| LOC110492188 | LOC106567294 | coding | upstream | 302458 | 49066331 ~ 49076257 (+) |
| LOC110492193 | LOC106566911 | coding | downstream | 3800 | 49394075 ~ 49407462 (+) |
| si:dkey-65j6.2 | LOC106566904 | coding | downstream | 354771 | 49745046 ~ 49778434 (+) |
| tgm2a | LOC106566906 | coding | downstream | 388379 | 49778654 ~ 49786311 (+) |
| tti1 | tti1 | coding | downstream | 399678 | 49789953 ~ 49798017 (+) |
| znf341 | LOC106566899 | coding | downstream | 548970 | 49939245 ~ 49951052 (+) |
| G1383571 | NA | non-coding | upstream | 818 | 49377664 ~ 49377897 (+) |
| G1383550 | NA | non-coding | upstream | 56590 | 49320569 ~ 49322125 (+) |
| G1382433 | NA | non-coding | upstream | 119211 | 49259273 ~ 49259504 (+) |
| G1382429 | NA | non-coding | upstream | 136473 | 49241641 ~ 49242242 (+) |
| G1383577 | NA | non-coding | downstream | 3350 | 49393625 ~ 49393829 (+) |
| G1383579 | NA | non-coding | downstream | 22209 | 49412484 ~ 49412936 (+) |
| G1383653 | LOC106566909 | non-coding | downstream | 148239 | 49538514 ~ 49540006 (+) |
| G1383820 | LOC106566903 | non-coding | downstream | 411712 | 49801987 ~ 49803696 (+) |
| G1383838 | NA | non-coding | downstream | 438138 | 49828413 ~ 49885949 (+) |
| LOC110492179 | NA | other | upstream | 344577 | 49024001 ~ 49034167 (+) |
| LOC110492164 | mitf | other | upstream | 1065899 | 48282132 ~ 48331926 (+) |
| LOC110491080 | LOC106572377 | other | upstream | 2349523 | 47026122 ~ 47029192 (+) |
| G1379959 | LOC106567238 | other | upstream | 2430498 | 46945257 ~ 46948217 (+) |
| LOC110492210 | LOC106566890 | other | downstream | 1100023 | 50490237 ~ 50796195 (+) |
| G1384247 | NA | other | downstream | 1182417 | 50572692 ~ 50573050 (+) |
| nphp4 | nphp4 | other | downstream | 1891128 | 51118978 ~ 51310839 (+) |
| G1386227 | ajap1 | other | downstream | 2135738 | 51526013 ~ 51526813 (+) |
| G1386254 | LOC106566883 | other | downstream | 2169878 | 51560153 ~ 51560878 (+) |
