LOC110491086 (LOC106566907)


Basic Information

Item Value
gene id LOC110491086
gene name LOC106566907
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 49576512 ~ 49719539 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945782.1
GCTGTAGACGCGCCCCAGCTGGAGACATGTTCTAAGGGCAGCAGGAGACCTGCGCTGTGACAACTATGAAAGGGTTAGGAGCCAATCGCAGCCGTCACCTGTCGGACTCCTGTGAGCCATCGGGGGCCCCAAAGAAGCCCCTGTACCCCTTGACCTCTGACGCCCACGGCCCCTTCCTTCTGAGCCCCACCATGAACCACTACGGCACCCTGGACCCCCACCAACTCTACCAGGGCCCCAACCCCCAATCCCTGCCTTCGGAGTGCCTGCTGCCCCTCAACCAGATGTCCAACAGCAGCACCTTCCCCCGCCTCCACTTCACCTCCCAACAAGAGCAGGCTGACTACTCCCCGGACTACTCCCAGGGCTACATGGTCCCTGCCGGGGGTGGGCCTGTGGGCAGCCGGGCGGGCACCCTGTCCACCTCCATGTCCATGGGCCTGGGTCTTAGAGGGGCTCCCATGATCACCAGTGGATCAGTTACCATCTCCTCTGCAGCAGCAGCCAAGATGAACCGGCTGCCATCTAACCTGTTGGACCAGCTGGAGAAGCACCTACCTCTGCAAAGGGATGGCTTCAGTACCCTCCAGTTCCACCGGGGCAGGGTGGCCAAGCAGCGCAGCGAGAGTCCCGGACGCATCCGTCACATCATGCACTCTGTCCAGAAGCTCTTCAACAAGTCCCAGTCGCTGGAGGGCTCGGTGGTCAAGGGCATCATGAACAGCACTACAgggggaggtgaggaggggaCCAGGCAGACCCGCAGGAGTAAGAGTAAAGACAGGGCTAAGACTGAGACGCTGAAGCAGCAACCTAGCAGGCAGAATGCACTGGGGCTCTGGCGCTCAGACAATGCCCTGGACAGTGACACAACCGCCAAACCTGGCACTATCGCCGTGGGCTACCGTAACCCACTTAGCATGATGACGCTGGGCAGGGCGGTGTCAGACAGCCAGGCTCCTCCCAGGCACCTCCCACAGGGCTACAACACCATATCTGCTCACACACTCAAGGCCTCCAAGAGCAGCAGCGACCTCAAGTACCTAGCCTGCCCGCAAGCGCTGGTAGGGACCAGGGGAGGGGagctggtgggaggaggaggcagggagagcACCCTGGTGAAGAGAGGCTCCTGGTCCACACTGACCCTCAGCCAGGCCAGGCAGGTGCTCCAGAAGGGCTCAGCCACAGTCAACAGGAAGCTGCTCAAAACCAATTCGTGTCACCAGGACCTGACCTGTCAGTACCTCCAGGTAGGAGGCCCAATTCCCCTGGGGGACTGGAGCGCTACGCTGGGGGGCCGGGGCCGGCCCGGGGGTCTGGAGATCCCCTGCCGGAGGATGCGTAGTGGCAGCTACGTCAAGGCCATGGGGGACGTGGACCAGGACAGCGAGGAGTCGGAGGGAAGCCCCAAACCCTCACCCAAAACAGCTGCCCGCCGCCAGAGCTACTTGAAGGCCACCCATCAGTCCCTGAGCGAGCAGCAGCCTCCACCACCACTGCAGAACTGTCTCCCCTCCCTGAGAGAGCTCTCCACCAATCGGAGCCTGGACAACCTGGACTGCTTGGTGAGCCCAGGAGAGCCCCCGATGGCCATGCGGCACTGGGATGATGGCAAAGACTTCCACCAGAGCTACTCTACCCTGGGCAGGGGCATGATGAGCAGTGGGCAGGTATGTAAGTCCACTCTCTCTATTACTCAGGACACTCTTCATCAGGGGAAACAGGATCCTTCCCACACTCTCACCATACACCACTACCTTACTTACAGAAGCATGCCCTGCCACCCGAGACTTGCACTGCTTTCGCCTCACAGGCGGTGGCGGGCTAGCTGTCGCCTAAGTCCCCGCCCCCAACGTGTCAACCTGCACGTGTCCTTTCAGGTGTGTGGGCAGGGCTGCGGGCGCTCGCTGTACTGCGAGGGGGAGTCCCAGGCAGTGGAGGCTCTGAACCTGCCCACACCGACGTGCTTTCGCTCCCGCAGCCACAGCTACCTGCGGGCCATCCAGGCCGGCTGCTCCCAGGATGAGGACACCGCCTCAGTGGACTCTGATTCACCTCCACCCACCACCACCGGCTGCACCTACACCTCCAGCCCCACACTGCCGACGTGTGTAAACAGCTCCTGTAAGAAGGCTCCCCCGCCGGTCCCTCCGCGCACTACCTCCAAGCCCTACATCTCTGTGACCGTGCAGAGCAGCACTGAGTCGGCCCAGGACACATACCTGGACCAACAGGACCACCGTGGCGAGGCCAACAGCCAATCAGGacgcagcagcaactcttccgaCAGCCTCTGCAGCCTGCGTACAGGCAGCCTGGCCAAGGGCTCAAAGCCCCCAGCCCCCGTCGCTGCCCCTGTCCCTGCCCCGAGGGactcccacccaccaccctcctccaccaccaccccgtCTTTGCCCCAGGTCCAGCCCCAGAATGACACCCTAAACCCAGGCCCCAGCCTCACCCCAGACCAGTCCCTGACCCTACCAGAGCCTGTTCCCACCAAAAGGAAGCTCTCGTCTATCGGCATCCAGGTGGATTGCGTTCAGCCAATCCAGAGAGAGGATCAACCGCCTCCCTCGACCAAGTTCCAGTCTATTGGAGTGCAGGTGGAGAACGGCAGGCCACTCAGCCGGGCCAGCAGCATGGCctccagacaggagacagagacagagcatcAAGACTCTGAACAAGATGTCCCTACCTCAGAAAACAACAGTACAGTCCACTGCAACAGCCAGCCACTAGACCCCGACCCCACTGCTTCCAACGGTAAGGAGTACGCAGTGGTGCGGCAGCCCCCTAAACATCCCCCTTTCCCGGCTAGAGCATCCGCCTCCCTCCCAGAGAGCCTGGACCCGACCTTGGATCCCTCCTTCCTGCCTCCTCCAGACCCCAGCTTGGTGGGTGGAAACGGCAGTGCCCAGGGAGATGCAGCTGCACCCAGCACCTGCCTCCGGGACGGCAACTGGTTTCTCAAACTTCTACAGGCTGAGACGGCACGCATGGAAGGCTGGTGTCAACAGATGGAGCAGGAGACCAAAGACAAGGACATCTCAGAGGAGGTGATGGGCACGGTCCGCAGTGCAGTGGGCAGTGCCCAACTCCTCATAGCCCAGAAGTTCCAGCAGTTCAGAGGACTCTGTGACGAGAACCTTAATGTGAATGCCAACCCTCAGCCCACAGCTCAGGACCTGGCAGGGTTCTGGGACCTCCTGCAGCTCTCTGTAGAGGACATCAGTGTCAAGTTTGATGAGCTCTGGCAACTCAAGGCCAACAACTGGCAGCTGCCGGAGAAGGAAGAGAAGAAGCCTGCACCCCCCGTTGTGCCAAAGAAGACATCCAAGCCCAAGCTGAGCCCTGGGAAGGACCGGAGCATAGATTCGGTGGTGGACAAGCAGCGGCAGGAGGCCAGGAAACGCCTGATGGCGGCCAAACGTGCGGCGTCCGTACGACAGAACTCTGCCACGGAAAGCTCAGACAGCATTGAGATCTACGTCCCCGAGGCCCAGACACGCCTCTGAGAACGGACCACCATTGGCACCCTGCTCCCCCCACATTAAGGAacagccacatacacacacacactagtgaacacacacacaccttgctccCCATGAAGGAACAGCCTCAAACACAGTAGAGAAACACCCAGAGGCGCAGAGGTTGGTCCCCTAATTGCAGCGCAGCGTCCGATAGGACGAGAGCACAGGACCGCAAAAAATGCAGAACAATGCAAAACTTTTTCCTTCCTGGCTGCCATGGagacagagacctgaacagacatTTAGTACTATTGTTATTAATATTATATTAAATATTGTTTTCTCCTAAAATATATCAAGAAGAATCTTGGATAAAAGGACATTCTTGTTCCTTGTGAGCTTAAGAATCTTGGTATCCCAGAAGTTTACTCTCTTCTCACCCCCTCACTGCTTCTGAGTCTGCGAGCTGGGCTGGGCTCTCTCGTTTACGAGCTACGGACCACCACACTCAGGATACACACAGGTGTACTCACTCACggtccacacacacagtcttccTCTTCTCACTTTGTATTAGGCTGCCACTGCATTGGTTGTGGACGGTAAGCTTTACTGTGTATGGAATCAAATCTATATGAGATGATGGGGTTGTCGTGTACAGAGTTAGAACACAGTCAGAAGACCAGAGGAAGACCGTAGCATTAGATCTATCTCACACTCTGGCTATTAGTAGGATgggtctttttttaaatgttctttaCCAGATTGTTTGTTAGACAAGGTCCAGTGTTCAGTACTAAGTTATTTTTTTATAGAACAGGTACATGTACTGTCATGATGATATTTGCACATGATGCAATCATTAACTCtcactcataaacacacactgtGCTGTCTGTCAGCGTCTGTGCAGACTCATGTTTTGTCTTGTATGCCCTTTTAGGGAAGAAGAGAGATTACTATGGCCAGTTGATGTGTGCTACAGTAGGAATGTAAAATGCAACGAAAATAACTTGATGACTGCACCTTCCACTCCAACTGTTTACCCCAGATCAAGTCAGCACCCTTCTGTTTCCCTGTTTATTCTGGCTACTTTTTTGGTGCAGGGGACCATGTGTATCTCTATTTATTACATTCCCAGTTTCACACTCAACCTCCTTTACAGGGACTCCCAAGCAGCATTGCTTCAATTTGAATCAGAAAGGGGAATTGACTATAAGCTCCCTGTCTTCCCTGATTACAAAGACTGATTTATTTTCACCTGCATAAGCCAGAGCTCTGCAAATGGTCTCGGGAGACAACTAGTATAAGTAAAATTGGACATTTGAGATGGCAACGTAAAAATGATTCTGATGTCCAGTCAAAAAAAAACAACCCCTAGCTTCTAAACGTTCCGTTTTTTTTTTCACATCTGAAGCGATAGGTAATAGCCAAACGATATGTAATGAGTGTACCTAGTCATGCAATTCACGATACTGCTTCCTCCAGTCTAATTCTTAGACTAGGGGTTGTTTTCTGACTGGGCTGAGTTTTCTCAGGGTGAGCACTCAGTCACTTAACACACCAACAGTCAAACCAACAGCACTTTGGTCATCATACCCCATTAATAACCACCACTTGATTGGTCAAAGCCTTAACTCAAACTGTCTGAAATGAATAATGATCCAAAagaatgaatacataccatacattataaataaatgtatttgcgTAAGTATCACCCATCTGTGCATTCAAAAGGTCCGAATCAAAGTATTGGTGTCTGGTCAAGTACTATTCCTGTTTTGTTGACGTGTTTCAGACTATGCTCCAGCTGAATTATTGTAGTCATATTAGTGTCTGGCAGCTTGACCTTTCATTCCTTTATACAGAAAAATGCACATTGAGGAGATTCAGGGACTAGGGTACATTATTTTTAAGCATTTTATTTTGTATGAGACATTTCATGTGACCTGTTTTGAATTTGTTTGACCTGTGCTACAATGGTTATTGGTATTTTTCTGGGTTTGGAGAGTTGATGGTGCTGCACAGGATTGACCATTGTACTGAGATGGTGTGGAATTAAATGCCTTTTCAAGAGAAACATTTCACCATCACTGAAACAGGCTTATTCCCACTATCGCAGGACTATAACATGCATGTAAATGAGCTTTCAGCTTTGCATTTCTCGTAACATGAAAGTTAATTTTCGCAAATGAATCTTAACGTTCCACTCATTCTCTGAATTCCAAATCAAGCCCCTAGCCAAGGCACTTCTGTAGATCTGAAACTATAGGACAggttgtaggccgtcattgtaaataagaatttgttcttagctgacttgcctagttaaataaagcacTATGGTGCAAGAAATTCCACCCAGTCTAACCGAAGCAAATAACCTCTGATCAAAGGTAATGTGACGTTATGCATACACCTATGTGAGGGATTGATTTGGAATTTAGAAATGGATCATCTGCAATTTCAGGATCTCAGTACTACTTGTCCCCTTGAAGAGCTGGCTCTCCCCCCTAAATGGTCAACACCTTTGTCACATGGCTGCTCCCAATGTGCTGATCTGATCCACagtcagttttgtatttttatcTCATAATGTCAAAAAATAGAGAGAATTAGAAGAACTGGGAAAGCAGCTGATGCAGTACCAGGACGttaattattttgtttatttgtaatacatcAACTACAGACATGTACATTTCATTGTCCAAAGAAATCATTAAACATCCCTTTGTTACAGTA
>TU1581430
AGCTCCAATTTAGCGTCGTTTATCCTTCGACACTCAGTGGGGCAATACGGCGGGCACCAGAAAACATTGTTGATTCGATTCGAATGAGAAGGACCGCCAATCTAACCTGCGTGATATTTTAGACCAGTACCGTTTTCCTTCTCATCACTCATATTGCAGATAAAACGGAATTACAGAATATCAAATCTTGTGCGTCCGACACCCATCTAACAGTCAACGATGAAATAAGGATGAGCCCTCCAGGGCTGTAGACGCGCCCCAGCTGGAGACATGTTCTAAGGGCAGCAGGAGACCTGCGCTGTGACAACTATGAAAGGGTTAGGAGCCAATCGCAGCCGTCACCTGTCGGACTCCTGTGAGCCATCGGGGGCCCCAAAGAAGCCCCTGTACCCCTTGACCTCTGACGCCCACGGCCCCTTCCTTCTGAGCCCCACCATGAACCACTACGGCACCCTGGACCCCCACCAACTCTACCAGGGCCCCAACCCCCAATCCCTGCCTTCGGAGTGCCTGCTGCCCCTCAACCAGATGTCCAACAGCAGCACCTTCCCCCGCCTCCACTTCACC

Function

NR:

description
PREDICTED: disks large-associated protein 4-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945782.1 False 6236 mRNA 0.52 10 49576512 49603440
TU1581430 True 567 TUCP 0.55 2 49603118 49719539

Neighbor

gene id symbol gene type direction distance location
pfkfb2a LOC106566908 coding downstream 5796 49553160 ~ 49570716 (-)
si:ch73-217n20.1 LOC106566909 coding downstream 33155 49534880 ~ 49543357 (-)
LOC110492195 LOC106566910 coding downstream 59244 49409128 ~ 49517268 (-)
LOC110492191 NA coding downstream 316876 49258037 ~ 49259636 (-)
LOC110492187 LOC106936674 coding downstream 379806 49179653 ~ 49196706 (-)
LOC110492200 rprd1b coding upstream 182207 49785647 ~ 49789953 (-)
LOC110492201 LOC106566903 coding upstream 198543 49801983 ~ 49833165 (-)
LOC110492202 LOC106566902 coding upstream 236658 49840098 ~ 49880822 (-)
LOC110491088 LOC106566900 coding upstream 324024 49927464 ~ 49933750 (-)
e2f1 LOC106566901 coding upstream 329639 49933079 ~ 49938888 (-)
G1384554 NA non-coding downstream 19022 49556496 ~ 49557490 (-)
G1384400 NA non-coding downstream 186238 49384035 ~ 49390274 (-)
G1384420 NA non-coding downstream 271379 49303471 ~ 49305133 (-)
G1384397 NA non-coding downstream 298014 49277989 ~ 49278498 (-)
G1384695 NA non-coding upstream 165121 49768561 ~ 49768975 (-)
G1384703 LOC106566904 non-coding upstream 170563 49774003 ~ 49775982 (-)
G1384896 NA non-coding upstream 494562 50098002 ~ 50103021 (-)
G1384934 NA non-coding upstream 605868 50209308 ~ 50210181 (-)
G1384933 NA non-coding upstream 608061 50211501 ~ 50215831 (-)
G1382894 mitf other downstream 1263554 48282213 ~ 48312958 (-)
G1382721 NA other downstream 1630290 47943379 ~ 47946222 (-)
LOC110492148 LOC106567259 other downstream 2127647 47409235 ~ 47908274 (-)
LOC110492137 LOC106567248 other downstream 2486982 47081938 ~ 47089563 (-)
G1384875 NA other upstream 461381 50064821 ~ 50065817 (-)
G1385645 NA other upstream 1452191 51055631 ~ 51056061 (-)
G1385888 NA other upstream 1487205 51090645 ~ 51128648 (-)
dffb LOC106566885 other upstream 1509963 51113403 ~ 51117850 (-)
LOC110492226 LOC106572002 other upstream 2379694 51978399 ~ 51990025 (-)

Expression


Co-expression Network