znf341 (LOC106566899)


Basic Information

Item Value
gene id znf341
gene name LOC106566899
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 49939245 ~ 49951052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566304.2
TCCTGGAACAGCTGTTGGGAATCCGCCCACCTAACTTTATCGGACACGCAGTCGTATTAATTGAGCGCCTACACACAGAAGAACTACAAGATGGCGCAGGCTATATTTGAAGTCCTGGAAGGGATGGACAACCAGACAGTCCTGGCTGTCCAGTCTCTGTTGGATGGCCAGGGAGGTGTGCCTGACCCAAACAGCCAGAACGTCTCAGGCTCATCTACCATTCAGTCAATGGACGACGAAGACGTCTTTCTTTGTGGGAAGTGCAAGAAACAGTTCAATTCATTGCATGCCTTCATGACCCACAAGAGAGAGCATTGCCAGTCCAATGCCCCTTCCCTGTCTACAGTATCACTGGCATCTAGTAATGCCTACACCCCTGTGCCCTCCATTAGCTCTGTGCCACAGACCCCCGCCAACAGACAGGTATCCACATACATTACAGTGCCTCCATCTCCTCTTACTCACACACTTGTCCAAGGCAATGTTTTAGTGAGTGATGATGTTCTGATGTCTGCCATCTCCGCCTTCACGTCCATTGACCAACCCATGGCAGCTTTGCAGCCCCCTATTCAGAGTAACCTGAGTATGCACACAGGTGCATCCTACCTCCAGCACCATCAGCagtcctcccactctctcccacctggacagtCTCAGCCTCTGTCCTCCCAGGTGCTGTCCAGTATCAGCAACTCAGTGGTCCAGGTCTACAGCACTATGCCTCAAATGTCTGGGAGTGGTAGTGCAGAGATTCACACCCTGGGCTTGCAGCCGTTCCAATCTGTACAGGTCCCCAGTCAGTGTGTGGAGAGCCAGTCATTCAACACTCCTCCAGTATACAGTCCTGGGAAGCAAGGCACCAAGACCAAAACCTGCAGCATCAATGCAAACCTAACTGAGCTTGAAGAGTTTGACAAGGTGATCATTCCTAAACAACCAAGAAATGTCAAGAAAGGCCAGGATGGAGCAGCAGCTGAACAAATGAAAGGAAAGTCCCAGAAGCTTAAATGCAATTTCTGTGACAAAGTCTTCTCCAAAAACTTTGATCTCCAGCAACATATCAGAAGtcatacaggggagaagcctttccagTGCATTGTATGCGGCCGGGCCTTTGCCCAGAAGTCTAATGTGAAGaagcacatgcagacacacaaagtGTGGCCTTCGGGAGTGGCCAATTCAGTGTCCAGGCTACCCATCACAGTCAAGGTGGTACCACTGTGTGCAGAGGAGGGCATAGAGCAACAGGAAGAACAGGAGGAACAacaacaggaagaggaggagcagccAGAAGCCCCAGGTGAGCCcgaggagagagactgtgacTCCCAGACTGATGTGGACAGCTTGGGAGATGGTGACTGCAAGCAGAAAGGCCAGCAGGCCCAGACCAAGCAGATTATCCTGATCGACAGCTCCTACCAGTGCCAGTTCTGTGCCGGCAAGTTCAGCACCTACTTCCAGCTCAAATCTCACATGACCCAGCACAAGGGGGAGCAGGTATATAAGTGTGTGGTGAAGACCTGTTCCCAGACATTCCAGAAGCTGGATCTGTTCCTGGAGCACATCCGGACACACCAGGAACAGCTCACCTACCGCTGCCACCTGTGTGGCAAGGTGTTCCCCTCGCTGTTTGAGCTGGGGGTGCACCAGTACTCCCATTGCTTCTGTCCCCAGCAGAACCCACGCAAGGAGACTACTTTCTATAGGTGCATGAAATGCCAAAGCCGGTACGCCACACAAGAGGCCTTGGAGCAGCATTTATTAACTGCCTCCCATAACTTCCCCTGCCCACATTGCCAAAAGGTTTTTCCTTGTGAGAGGTATTTCCGACGACACCTGCCCACACATGGTATCGGAGGGAGGTTCAAATGTCAGATATGTAAAAAGTTCTTCAAAACCGAGCACTACCTCAAACTGCACACTCGTATCCACTCAGGAGAAAAGCCATACAAATGTTCTGTTTGTGAGGCCATGTTCAACAGGAAGGACAAGGTGAAGAGGCACATGCTCATTCATGAGCCCTTTAAGAAATACAAATGTCCATTTAGGACACATGTTGGCTGCACTAAAGAGTTTAACAGACCAGACAAGCTGAAGGCACACATATTGTCTCATTCTGGTATTAAGCCCTATAAATGTGGGTACTGCCAGAAAGCTTTCAGCAGAAGAGCCCACATGCTGGAGCACCAGCGCTCGCACACAGACAACTATCGTTTCCGCTGTGCCACCTGCAACAAGGGCTTCACGCGACAGAAGTACTACAGAGACCACAAGTGCCCCGTGGCTGCGGTGAAGGACGGGGCggagaagagagtgaagaggCAGGGACACAGGACAGAGGGGAACCAGGAGTCGGAGCATAGCAGGGAAGAGGtggatgaaagggaggaagaagagaggattgAGGACCCTCAGGCAGTGGAATCAAGTGTTCCAGTTGAGGATCAgtcagagggaggagaggcagagcaggaggagcactttGGAGACTGCTGAGTGACACTGGCTGTTTACAGCAGAGCACCCATGTTTAGAGACAATGGATTGTGGCCTGAGTTGCATTCAAGCCAAATCTTGATCTTGTCCTGAGACTACCTCTGCATGTGGAGGGGATTTGAATCTCTCCCAATTAAAAGGTGTTTCTATACGTTTTATATTAAAACATTGAAGCGTGGCACTTTTTCCTGTCAATGATTGTTATTCAGAACAGTGAGATGCCTCATCCGTGACCAGACATGTGATAATGTTTTCATCCTGATGAAAGCACTTTGTTTAAAAGGTATTTTTCGCCACATGTAGTGTCACTCTATTGTGGACATTCCTGACTACCTTAGGTACTGATTCTATTTTGTGAAACATTTTATGTAATGTATGAATCTTGAGGCATGCACTTGATGTTTATTGAATAAATTAAGCTGCATCTATTCAAAATGGATAGCCATGACTTTAAGCAGTTTCACTCTACATGATTGGAGCAGAAATCTTTCGTACATAAATCAAAACATTTCACCATAAACCCCTTTTTATAAAAGGAAATTCATTTGTTATTAACAATTTACAACATGGTTTCATATACAGGGATAGCAGTTACGATACATCTGGAGACAAAAATAAAAGGGGCTGGCTTTTTATTTGCAATGcaacaaatgattatttacacATTTACTTCCCTGGGATTTCCATTCATAATCTTCCAgggaaaaaaatatgtattcCCATGCCTTTGCCACAGCCAGAAAAACATCTCCCATTTCCTATAAAAATCGATAAATTCATATGCTAAAAATCTCCCAGACTATTAAAAGCTACATGTATATCTAGTCTCCAATGTGGTTAAATCTCATATCACTGAAGACATCTCAAGGCAATATTCTAGACAAACATTTcagaatacttaaaaaaaaa
>XM_036947164.1
TCCTGGAACAGCTGTTGGGAATCCGCCCACCTAACTTTATCGGACACGCAGTCGTATTAATTGAGCGCCTACACACAGAAGAACTACAAGATGGCGCAGGCTATATTTGAAGTCCTGGAAGGGATGGACAACCAGACAGTCCTGGCTGTCCAGTCTCTGTTGGATGGCCAGGGAGGTGTGCCTGACCCAAACAGCCAGAACGTCTCAGGCTCATCTACCATTCAGTCAATGGACGACGAAGACGTCTTTCTTTGTGGGAAGTGCAAGAAACAGTTCAATTCATTGCATGCCTTCATGACCCACAAGAGAGAGCATTGCCAGTCCAATGCCCCTTCCCTGTCTACAGTATCACTGGCATCTAGTAATGCCTACACCCCTGTGCCCTCCATTAGCTCTGTGCCACAGACCCCCGCCAACAGACAGGTATCCACATACATTACAGTGCCTCCATCTCCTCTTACTCACACACTTGTCCAAGGCAATGTTTTAGTGAGTGATGATGTTCTGATGTCTGCCATCTCCGCCTTCACGTCCATTGACCAACCCATGGCAGCTTTGCAGCCCCCTATTCAGAGTAACCTGAGTATGCACACAGGTGCATCCTACCTCCAGCACCATCAGCagtcctcccactctctcccacctggacagtCTCAGCCTCTGTCCTCCCAGGTGCTGTCCAGTATCAGCAACTCAGTGGTCCAGGTCTACAGCACTATGCCTCAAATGTCTGGGAGTGGTAGTGCAGAGATTCACACCCTGGGCTTGCAGCCGTTCCAATCTGTACAGGTCCCCAGTCAGTGTGTGGAGAGCCAGTCATTCAACACTCCTCCAGTATACAGTCCTGGGAAGCAAGGCACCAAGACCAAAACCTGCAGCATCAATGCAAACCTAACTGAGCTTGAAGAGTTTGACAAGGTGATCATTCCTAAACAACCAAGAAATGTCAAGAAAGGCCAGGATGGAGCAGCAGCTGAACAAATGAAAGGAAAGTCCCAGAAGCTTAAATGCAATTTCTGTGACAAAGTCTTCTCCAAAAACTTTGATCTCCAGCAACATATCAGAAGtcatacaggggagaagcctttccagTGCATTGTATGCGGCCGGGCCTTTGCCCAGAAGTCTAATGTGAAGaagcacatgcagacacacaaagtGTGGCCTTCGGGAGTGGCCAATTCAGTGTCCAGGCTACCCATCACAGTCAAGGTGGTACCACTGTGTGCAGAGGAGGGCATAGAGCAACAGGAAGAACAGGAGGAACAacaacaggaagaggaggagcagccAGAAGCCCCAGGTGAGCCcgaggagagagactgtgacTCCCAGACTGATGTGGACAGCTTGGGAGATGGTGACTGCAAGCAGAAAGGCCAGCAGGCCCAGACCAAGCAGATTATCCTGATCGACAGCTCCTACCAGTGCCAGTTCTGTGCCGGCAAGTTCAGCACCTACTTCCAGCTCAAATCTCACATGACCCAGCACAAGGGGGAGCAGTCtactgtccccacttgcttcaagatgtccaccattgttgctgtacccaagaaagtgaagGTATATAAGTGTGTGGTGAAGACCTGTTCCCAGACATTCCAGAAGCTGGATCTGTTCCTGGAGCACATCCGGACACACCAGGAACAGCTCACCTACCGCTGCCACCTGTGTGGCAAGGTGTTCCCCTCGCTGTTTGAGCTGGGGGTGCACCAGTACTCCCATTGCTTCTGTCCCCAGCAGAACCCACGCAAGGAGACTACTTTCTATAGGTGCATGAAATGCCAAAGCCGGTACGCCACACAAGAGGCCTTGGAGCAGCATTTATTAACTGCCTCCCATAACTTCCCCTGCCCACATTGCCAAAAGGTTTTTCCTTGTGAGAGGTATTTCCGACGACACCTGCCCACACATGGTATCGGAGGGAGGTTCAAATGTCAGATATGTAAAAAGTTCTTCAAAACCGAGCACTACCTCAAACTGCACACTCGTATCCACTCAGGAGAAAAGCCATACAAATGTTCTGTTTGTGAGGCCATGTTCAACAGGAAGGACAAGGTGAAGAGGCACATGCTCATTCATGAGCCCTTTAAGAAATACAAATGTCCATTTAGGACACATGTTGGCTGCACTAAAGAGTTTAACAGACCAGACAAGCTGAAGGCACACATATTGTCTCATTCTGGTATTAAGCCCTATAAATGTGGGTACTGCCAGAAAGCTTTCAGCAGAAGAGCCCACATGCTGGAGCACCAGCGCTCGCACACAGACAACTATCGTTTCCGCTGTGCCACCTGCAACAAGGGCTTCACGCGACAGAAGTACTACAGAGACCACAAGTGCCCCGTGGCTGCGGTGAAGGACGGGGCggagaagagagtgaagaggCAGGGACACAGGACAGAGGGGAACCAGGAGTCGGAGCATAGCAGGGAAGAGGtggatgaaagggaggaagaagagaggattgAGGACCCTCAGGCAGTGGAATCAAGTGTTCCAGTTGAGGATCAgtcagagggaggagaggcagagcaggaggagcactttGGAGACTGCTGAGTGACACTGGCTGTTTACAGCAGAGCACCCATGTTTAGAGACAATGGATTGTGGCCTGAGTTGCATTCAAGCCAAATCTTGATCTTGTCCTGAGACTACCTCTGCATGTGGAGGGGATTTGAATCTCTCCCAATTAAAAGGTGTTTCTATACGTTTTATATTAAAACATTGAAGCGTGGCACTTTTTCCTGTCAATGATTGTTATTCAGAACAGTGAGATGCCTCATCCGTGACCAGACATGTGATAATGTTTTCATCCTGATGAAAGCACTTTGTTTAAAAGGTATTTTTCGCCACATGTAGTGTCACTCTATTGTGGACATTCCTGACTACCTTAGGTACTGATTCTATTTTGTGAAACATTTTATGTAATGTATGAATCTTGAGGCATGCACTTGATGTTTATTGAATAAATTAAGCTGCATCTATTCAAAATGGATAGCCATGACTTTAAGCAGTTTCACTCTACATGATTGGAGCAGAAATCTTTCGTACATAAATCAAAACATTTCACCATAAACCCCTTTTTATAAAAGGAAATTCATTTGTTATTAACAATTTACAACATGGTTTCATATACAGGGATAGCAGTTACGATACATCTGGAGACAAAAATAAAAGGGGCTGGCTTTTTATTTGCAATGcaacaaatgattatttacacATTTACTTCCCTGGGATTTCCATTCATAATCTTCCAgggaaaaaaatatgtattcCCATGCCTTTGCCACAGCCAGAAAAACATCTCCCATTTCCTATAAAAATCGATAAATTCATATGCTAAAAATCTCCCAGACTATTAAAAGCTACATGTATATCTAGTCTCCAATGTGGTTAAATCTCATATCACTGAAGACATCTCAAGGCAATATTCTAGACAAACATTTcagaatacttaaaaaaaaa

Function

NR:

description
zinc finger protein 341-like

GO: NA

KEGG:

id description
K24852 ZNF341; zinc finger protein 341

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566304.2 False 3411 mRNA 0.47 15 49939245 49951052
XM_036947164.1 True 3471 mRNA 0.47 16 49939245 49951052

Neighbor

gene id symbol gene type direction distance location
tti1 tti1 coding upstream 141228 49789953 ~ 49798017 (+)
tgm2a LOC106566906 coding upstream 152934 49778654 ~ 49786311 (+)
si:dkey-65j6.2 LOC106566904 coding upstream 160811 49745046 ~ 49778434 (+)
LOC110492193 LOC106566911 coding upstream 531783 49394075 ~ 49407462 (+)
LOC110492192 NA coding upstream 548970 49378715 ~ 49390275 (+)
LOC110492206 LOC106566897 coding downstream 45670 49996722 ~ 50015523 (+)
LOC100136219 LOC106566896 coding downstream 170014 50121066 ~ 50210247 (+)
LOC110492207 LOC106566895 coding downstream 290926 50241978 ~ 50311045 (+)
LOC110492209 LOC106566893 coding downstream 373093 50324145 ~ 50326821 (+)
LOC110492210 LOC106566890 coding downstream 539185 50490237 ~ 50796195 (+)
G1383913 LOC106566901 non-coding upstream 2768 49936149 ~ 49936477 (+)
G1383838 NA non-coding upstream 53296 49828413 ~ 49885949 (+)
G1383849 ctnnbl1 non-coding upstream 70042 49868783 ~ 49869203 (+)
G1383820 LOC106566903 non-coding upstream 135549 49801987 ~ 49803696 (+)
G1383653 LOC106566909 non-coding upstream 399239 49538514 ~ 49540006 (+)
G1383973 NA non-coding downstream 259297 50210349 ~ 50215881 (+)
G1384043 NA non-coding downstream 270332 50221384 ~ 50221756 (+)
G1384045 NA non-coding downstream 271991 50223043 ~ 50223260 (+)
LOC110492182 LOC106566913 other upstream 689370 49202107 ~ 49258042 (+)
LOC110492179 NA other upstream 905107 49024001 ~ 49034167 (+)
LOC110492164 mitf other upstream 1626429 48282132 ~ 48331926 (+)
LOC110491080 LOC106572377 other upstream 2910053 47026122 ~ 47029192 (+)
G1379959 LOC106567238 other upstream 2991028 46945257 ~ 46948217 (+)
G1384247 NA other downstream 621640 50572692 ~ 50573050 (+)
nphp4 nphp4 other downstream 1330351 51118978 ~ 51310839 (+)
G1386227 ajap1 other downstream 1574961 51526013 ~ 51526813 (+)
G1386254 LOC106566883 other downstream 1609101 51560153 ~ 51560878 (+)

Expression


Co-expression Network