Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492909 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50938724 ~ 50939714 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002469095.2 | True | 548 | mRNA | 0.45 | 3 | 50938724 | 50939714 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492210 | LOC106566890 | coding | upstream | 142529 | 50490237 ~ 50796195 (+) |
| LOC110492209 | LOC106566893 | coding | upstream | 611903 | 50324145 ~ 50326821 (+) |
| LOC110492207 | LOC106566895 | coding | upstream | 627679 | 50241978 ~ 50311045 (+) |
| LOC100136219 | LOC106566896 | coding | upstream | 729527 | 50121066 ~ 50210247 (+) |
| LOC110492206 | LOC106566897 | coding | upstream | 923201 | 49996722 ~ 50015523 (+) |
| LOC118939554 | NA | coding | downstream | 148387 | 51088101 ~ 51094492 (+) |
| c16h1orf174 | LOC106566886 | coding | downstream | 170394 | 51110108 ~ 51113467 (+) |
| nphp4 | nphp4 | coding | downstream | 179264 | 51118978 ~ 51310839 (+) |
| cfap74 | cfap74 | coding | downstream | 797881 | 51737595 ~ 51787114 (+) |
| LOC110492222 | LOC106566880 | coding | downstream | 863347 | 51803061 ~ 51862196 (+) |
| G1385432 | NA | non-coding | upstream | 37454 | 50901004 ~ 50901270 (+) |
| G1385424 | NA | non-coding | upstream | 46595 | 50891800 ~ 50892129 (+) |
| G1385423 | NA | non-coding | upstream | 48175 | 50890145 ~ 50890549 (+) |
| G1385413 | NA | non-coding | upstream | 57906 | 50880591 ~ 50880818 (+) |
| G1385396 | NA | non-coding | upstream | 70951 | 50867533 ~ 50867773 (+) |
| G1385578 | NA | non-coding | downstream | 59832 | 50999546 ~ 50999818 (+) |
| G1385583 | NA | non-coding | downstream | 67148 | 51006862 ~ 51007096 (+) |
| G1385594 | NA | non-coding | downstream | 79969 | 51019683 ~ 51019909 (+) |
| G1385595 | NA | non-coding | downstream | 80802 | 51020516 ~ 51020815 (+) |
| G1385599 | NA | non-coding | downstream | 81426 | 51021140 ~ 51021334 (+) |
| G1384247 | NA | other | upstream | 365674 | 50572692 ~ 50573050 (+) |
| LOC110492182 | LOC106566913 | other | upstream | 1688849 | 49202107 ~ 49258042 (+) |
| LOC110492179 | NA | other | upstream | 1904586 | 49024001 ~ 49034167 (+) |
| LOC110492164 | mitf | other | upstream | 2625908 | 48282132 ~ 48331926 (+) |
| G1386227 | ajap1 | other | downstream | 586299 | 51526013 ~ 51526813 (+) |
| G1386254 | LOC106566883 | other | downstream | 620439 | 51560153 ~ 51560878 (+) |
| LOC110492224 | NA | other | downstream | 979274 | 51916126 ~ 51920772 (+) |
| G1386998 | NA | other | downstream | 1342479 | 52282193 ~ 52286457 (+) |
