LOC110491090 (fam57b)


Basic Information

Item Value
gene id LOC110491090
gene name fam57b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 51076778 ~ 51077359 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110491090
CCCGACCTGACCACCCTGGCTGCCGGGTCTGTCTTCTTCCCAGGCCTGTTCATGCTCTCCAAGAAATGCCTCAAATACATCCCTGCACTAAGGTGGAGCAAAGGGGATGCGGTCAGTGTCAACCGGGTTGGTGTTCTCCGTTCAGGCGATCATGGCCTCCTCAactggttacatcactgcctcCTCCTGTGAAGACATCATCAAGGATCAGTATTGGCTGACCAGCACCTACATCCTCTTTGCCATGCCCTACTTTGTGTATGAAATCTATGCTATGGTCATGAGCTACTGGTACAAGCAACGGGTCAAGGATCACAAAGCAGACAGCGGCGCCAAACGCCTGGGTGCGGCCCTGGCCTGCGACGCAAGTTCCTCATTGTGCTCCAGCACGTAGTCATGGTCACTGTGTGCTTCCTCATCTCTGTGTTCTGGCGACAGGGCAAGGGGGATTACTTTCAGGGCGTCATGTTACGGGCTGAACTCAGCACACCATCGGTCTGTCTGGGAAAGATCCTTAACCACTACAAACAGCAACACACTCCCCTGGACAAAGTGAATGGGGCTACAATGCTGCAGTGTTAA

Function

NR:

description
PREDICTED: protein FAM57B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110491090 True 582 mRNA 0.54 1 51076778 51077359

Neighbor

gene id symbol gene type direction distance location
LOC110491089 lrrc47 coding downstream 32984 51041123 ~ 51043794 (-)
mad2l2 mad2l2 coding downstream 44859 51021456 ~ 51031919 (-)
LOC110492208 LOC106566894 coding downstream 758005 50314916 ~ 50318773 (-)
itchb LOC106566898 coding downstream 1105485 49950665 ~ 49971293 (-)
e2f1 LOC106566901 coding downstream 1137890 49933079 ~ 49938888 (-)
LOC110492214 LOC106566770 coding upstream 24424 51101783 ~ 51103933 (-)
dffb LOC106566885 coding upstream 36232 51113403 ~ 51117850 (-)
LOC110492220 LOC106566883 coding upstream 444990 51522349 ~ 51603970 (-)
LOC110491091 LOC106566924 coding upstream 613524 51690883 ~ 51717957 (-)
LOC110492221 LOC106566882 coding upstream 644611 51721970 ~ 51738292 (-)
G1385665 NA non-coding downstream 4540 51071866 ~ 51072238 (-)
G1385634 NA non-coding downstream 28398 51048066 ~ 51048380 (-)
G1385592 NA non-coding downstream 61363 51015073 ~ 51015415 (-)
G1386030 NA non-coding upstream 228135 51305494 ~ 51340532 (-)
G1386059 NA non-coding upstream 284006 51361365 ~ 51362050 (-)
G1386060 NA non-coding upstream 299353 51376712 ~ 51384868 (-)
G1386064 NA non-coding upstream 308867 51386226 ~ 51386542 (-)
G1386067 NA non-coding upstream 312917 51390276 ~ 51390551 (-)
G1385645 NA other downstream 20717 51055631 ~ 51056061 (-)
G1384875 NA other downstream 1010961 50064821 ~ 50065817 (-)
LOC110491086 LOC106566907 other downstream 1357239 49576512 ~ 49719539 (-)
LOC110492187 LOC106936674 other downstream 1880452 49179653 ~ 49196706 (-)
G1382894 mitf other downstream 2763820 48282213 ~ 48312958 (-)
G1385888 NA other upstream 13286 51090645 ~ 51128648 (-)
LOC110492226 LOC106572002 other upstream 905775 51978399 ~ 51990025 (-)
spen LOC106566857 other upstream 1341517 52379551 ~ 52428869 (-)
LOC110492250 LOC106566852 other upstream 1494351 52566433 ~ 52577143 (-)

Expression


Co-expression Network