LOC110491091 (LOC106566924)


Basic Information

Item Value
gene id LOC110491091
gene name LOC106566924
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 51690883 ~ 51717957 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945783.1
AACAATGATAATCTAAGGAGTTGACTGAAGCAGATCTGGGACCGGACACCTCATTtgatcctaaccttaaccattagggcCAAACTGACCTTAGGTAAGTGTCTTAACGGACACTTCATCCTCCTCAACTGGGGCTTGTGGGACTCCTCTCTCAGACAGGATGTGTCGCATCATCAACTTCCTGCTGGCTCTGCTGAGCCGTTTCCTGTTTGCTGTGCATGGGGTGGTGACCGTGTGGCGTGTGGTCGCCGTCAAAGGGGAGCCCCTCTATTGGCTGCTGCTGATGGGCGTGGCTCTGCTGGGGGTGGAGATGGCAGTCACCATCAAGTGTACCCGCAATGCAGAGTGGAAATGGTTCTCCCCCATGGTTTTCCTCTACCTCAGTACCGTCATCCCCTCCATTTGGTTCCTGGAGCTCAGCCTGCTGCAGTACAAGCTCCCTGTCAACATCTCCTCTGGCCCCGAGCTAGAAGAGCTGCTGGCTCACATCCCCATCTCAGCGGACATCTTGCAGCTGGACCCAGAGAACTGGGCGGCAGGGCTGGAGCAGACCATGCTCATCGTACTGGTGCTGGGCCGCTGGCTTATGCCCAAAGGAGACATGTCCCGCGACCAGCTCTCCCAGCTCCTCATGGTCTACGTGGGCCTGGGCGCTGACATCCTGGACATCTTTGACACCTTCAAGGAGCCCGAGGTCAAGACCAACAGGGCCGTTATCATTATGGGCCTTGCCCTCTTTTCCTGGGCCCTCATGCAGTTCCCCTTGGTTCTGACCCAGACCAGTCCCCCCAAGGCCCATCTCCAGCCCTGTTTGTCCCAGCCCGGCTTCCTCCAGCGGGGCCTCTCTCAGGAGGGAAGCGTGGCTGTAGTGGAGGGACTGCCTGGAGCTCCCCCCTCCTGCTATACACCGTGCTGCTCCAGTGAAGTGTGGAGTCTGCTGTTGACTGTGGGGCTCCAGGACGGGCCGTTCCTCATCTACCGCCTCTACCTCATGATCAGGGAGAACGTTCTCAACCAGTTAATGATCTTCTTCACCTGTAAAAACATCCTTGTCGTCCTGCTGGAGTTCTACAGGATCTTTGTGGTGCAGTGTGAGCAGCAGGGGGAGGGCTGCCTAGGGGGGCTGGAGATGTGTGCAATGCCCTGGTGCCAACAAGcccaggaggaggaggtggagggaagacGACAGGATAGTGGAGAACAGAACtgccagagagaggaggggagggaggGACCCCACCTGGCATTCCACCTGGACGGATACCTGGGAGACTGGGATGCAGATGGTGAAAGTCGGCGATGA

Function

NR:

description
PREDICTED: transmembrane protein 26-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945783.1 True 1303 mRNA 0.58 4 51690883 51717957

Neighbor

gene id symbol gene type direction distance location
LOC110492220 LOC106566883 coding downstream 86913 51522349 ~ 51603970 (-)
dffb LOC106566885 coding downstream 573033 51113403 ~ 51117850 (-)
LOC110492214 LOC106566770 coding downstream 586950 51101783 ~ 51103933 (-)
LOC110491090 fam57b coding downstream 613524 51076778 ~ 51077359 (-)
LOC110491089 lrrc47 coding downstream 647089 51041123 ~ 51043794 (-)
LOC110492221 LOC106566882 coding upstream 4013 51721970 ~ 51738292 (-)
LOC110492226 LOC106572002 coding upstream 262657 51978399 ~ 51990025 (-)
LOC110492229 LOC106566874 coding upstream 280601 51998558 ~ 52069366 (-)
LOC110492230 NA coding upstream 355783 52073740 ~ 52077554 (-)
LOC110492234 LOC106566870 coding upstream 450858 52168815 ~ 52206285 (-)
G1386674 NA non-coding downstream 1142 51689406 ~ 51689741 (-)
G1386669 NA non-coding downstream 6098 51684569 ~ 51684785 (-)
G1386668 NA non-coding downstream 6960 51683717 ~ 51683923 (-)
G1386667 NA non-coding downstream 7317 51683363 ~ 51683566 (-)
G1386650 NA non-coding downstream 29606 51661062 ~ 51661277 (-)
G1386716 gnb2 non-coding upstream 131858 51849815 ~ 51852787 (-)
G1386713 NA non-coding upstream 142372 51860329 ~ 51862186 (-)
G1386781 NA non-coding upstream 152734 51870691 ~ 51871007 (-)
G1386782 NA non-coding upstream 153933 51871890 ~ 51872097 (-)
G1386784 NA non-coding upstream 156004 51873961 ~ 51874371 (-)
G1385888 NA other downstream 562235 51090645 ~ 51128648 (-)
G1385645 NA other downstream 634822 51055631 ~ 51056061 (-)
G1384875 NA other downstream 1625066 50064821 ~ 50065817 (-)
LOC110491086 LOC106566907 other downstream 1971344 49576512 ~ 49719539 (-)
spen LOC106566857 other upstream 700919 52379551 ~ 52428869 (-)
LOC110492250 LOC106566852 other upstream 853753 52566433 ~ 52577143 (-)
G1388236 NA other upstream 1313975 53031932 ~ 53032921 (-)
LOC110492299 LOC106566805 other upstream 2012380 53730164 ~ 53757019 (-)

Expression


Co-expression Network