LOC110492234 (LOC106566870)


Basic Information

Item Value
gene id LOC110492234
gene name LOC106566870
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 52168815 ~ 52206285 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566371.2
acgtaacagattacatgtaatccaaTACTCCCCAAACCTGCTTGTCATGTAACCACAAACAAGTTGCCAATGTTAGATGGAAtacacaatattgtgtagagttTTAATGATAGCAGATTAACTGGCAACTGAGTTTTTTTGATAGATTTCTGGTTTGTTGATAGTGACATGATGAAAGAACAACTTTTGAATTTTTTATTGATAAAATCTGGAAAACTGTTCAAATGAGGACAATTAGACTTTCTCTCACCACTGCTTAGTAGAGGGTTGACCGAGGTAACCATTTTTTATGTTTAATTAGGGAGTTATAATGCTTGGGAGAGGGAGAAGCCAAGTAGTTCAAGCATGCGTTTGCAAATACTTTCTTTCTCCAAACTGATACTTAGCTACTTACTTAATTGCATGggcgcacacgcatacacacacacacagacactgcctgagtacacacacagacagacacacgcctGAGCGCACACACTGTCTGCTTCCCACCCCTTTTCCCTCCTACTTGCCTTCTATCCACTTTCAGTGCATTTCTGTTGACACACAACGATCTGacccatgcgcacacacacacacacagacaaactatCACACATATTCACAGAAAGGAAAACATTTTCTCTCACACAGATGGCTGCTAGCACACTCCTCTCTCGATCTCTTTCTATAAGCAGGTGTTGAAATGCAACACTAACTATTAGAGgccgagagaaaaagagggggagagggaggagagagaacgggagagagtgCACTTCCCCAACTgtagcagggagagaggggacgagagggATTGTCAacgaggagagggagagcagaagcCTAAAGAGGGATCTGCATGGTAAGTAACCAGACCAGCGAGCACTTTTTTTCGTTTAAAGTTCCTGTTTTTTGTTGGAGGGAGAAGAAAATAAAGACACAACGGAGGAGTCGGGACCCTGTCCCCTACTTTCTGGACGAGTGGAGTAAAAATCTGAAGAAGACCTGAAGGGAATGAAGCTGGGAGGGACACAAGGCAGTCATGGATAGCACATAGAGCCTCAGCCAGACGATAGGATGGCCTGGATTCACACACTGTCGCTGGCAACCATCCAGCTCAGAAGCTACTGATATCCATGAGTCATGCTTCCCGGGTATGGATTCTCCCCTCTCCCTGACTTCCAGCCTCACCTCCATGTCTTCCGTTGCCGAGGAGAGTGTCCCAGCATGTGGTTCCCGGTCTCAGGCGAGTCTCAGGCTTTGAGCGAGGCCCGGGACGACAGGCCTCTCCTGCGGCAGTGCCAGCACAACCACATCGCCGTGTGTCAGCAGGAGCGGCAGCCGCCTGTGACCCCCAGCGACAACGGCCATGGATCACCTACTGCAGACGCTCAGCACTCCACCCCTTTGCCTCTGAATCATCGCAAACACACAAGGACTGAAGCAGAAAATGGCGGCTGGAGGAGTAACCCTGATCAAGACACTGATACGGACCTGAGTTCAGACTCTCAGATGCCAGGGGGTGACATTGAGCTTTTTATCCGGGAAGATAGGGGGACTGACCCTCCAGGGCAAGAGAAGTGTGAGAGACCCACGGTGGTGTCGACGGTGTTTCGTCCCCTCCACACAGCCCTCAGCCTGcccctgttcctccctctgtcctccctgtaCAGGGACACAGACTACTGTAACTCTCAGTCACCTGGCTCTCTATCCTCACATGAGCCTCCGGAGATGCAGACCCCAGACACCTGTCGACCCCAGAGGAGGACGTCACAGGGTTCACTCAAGGAAAAGTCTATCCGGCGTAAGATGCGAGTGTACTCACCAGACAGCCTGAGTGACGATTCTTTGGCCAGCCCCATTCTGGATGGCGACTACCTCTTCTCAGGACCCTTCGATTCCTTCCTGGAGGAGGACATCGGGGGAGACCCTGTAGATGCCACGAGCCCCTCATCAACAGGGGGGACACCCAACCCTCGAAAGACTCCACCTTTTTCCGCAGAGCCGCTGCAGTTGTCAGAGCACTCATCTGTCTTGAACTGTGGGGCTGTAGAGAATTCCTCGGCCACCGGAGGAAGCTCTTTAGCCCGCTCCAGTATGGCGGAACACGAGCGGCGTCGCTTCTCAGCCTCAGAGCTGATCTCACGGCTACAGCTTTCCCAGAGGAAGAACTCGTTCACACTAAAGCTTGGCAAGTCACTGTCAGCTCGCGTGGCCTCCCGCGACAGGCAGAACCCCAGCAACTTCAGCCCTGACTATAAGTCCACTTCCAGGCATCGTTGCTCAGGTGGTGCCAGTGACAGCGCCCCCCATAGTCCAGTAGGACCTACACCGCAACTGCCATCTGCTGACAAAAACACGCAACAACATCGACGTAGCACCGGATTCACAATCAAAAATTTGAGGAAGAAATCCATTGAGGATGATTGGTGCACTCCTCCCACAGTCAGCAGATCCAATCGTCTGTCACGGTTTCTCCCCAGCTcaATTCTGTACCAGGAGTACAGTGATGTTGCAATCAACCGAGAAATCCTGAGGCAGCAGGGGGAGGAGCCAGGTGCTGAGGAGGAGGGGCTAAGGGAGGAAGGGGCTGGGGAGACTCCATCTCCGTCTAATCTGTCTCCATCCAGCTCCTTTTGCTCATCACGAGGCTCCGCCTTCTCGCTGTGGCAAGACATCCCTGATGTCCGGACCAGCGGTCAGCTGGACAACTTCAGCAATGTTGAGCGCAAACTACAGGAGGCCAAGTTTGAGCTGGTGACATCAGAGGCGTCGTACATTCGGAGTCTGACCATCGCAGTGGACCATTTTATGCTGTCCCAGGAGCTGGGGGAGTGTCTGGGGGCCCAGGACAGACAGTGGCTCTTCTCCAAGCTCCCCGAGGTCAAGGACGTCAGTGAGAGgttccTGCAGGACCTGGAGCACAGACTGGAGGAGGACATCTTGCGTTTTGACGTGTCTGACATCGTCCTGGCCCACTGTCCCGCCCTGCGAAGGGTCTACCTCCCCTACGTGACCAACCAGGCCTACCAGGAACAGACCTACCAGCGCATGTTACAGGAGAATGCTCGCTTCCCAGGTATCCTGGCTCGTTTGGAAGAAGACCCCATCTGCCAGCGTCTTCCCCTCGCCTCCTTCCTCATCCTCCCCTTCCAGAGGATCACACGGCTCAAGATGCTGGTGGAGAATATCCTAAAGAGGACAACACCAGGCTCTAGGGATGAGGACACAGCCACCAAGGCCTTCAATGAGCTGAAAAAGATTATAAAGGAATGTAACTCCAGTGTGCAGTCAATGAAGAGGATGGAAGAGCTCATTCACCTCAATAAGAAGATCCACTTTGAGGGCAAGATATTCCCTCTGATCTCCCAGTCTCGCTGGCTGGTCAAGCATGGAGAACTGCTCGAAGTGGACACACAGACCATGAGTATTTCTGGGTCAAAGTTCAAGTTGCCCACAAGGCCTGTGTACTTGCATCTGTTCAATGACTGTCTTCTGCTGTCCAAGAAGAAGGACACGTGGAAGTTCATGGTGTTTGTTCACGCTAAGATCGGGCAGCTGAAGGTGAAGGACCTCAGTCAGAAGCTTCAGGGCATCTCAGGTTTCATCTTCCACCTGCAGCTGTGTGAGGGCCGGCAACTCAAACACCAGATCCTACTCAAGGCCCACACTGAGAGTGGGAAACAAAGATGGATCACAGCCATGTTTCCCTCTGATCCATTGGAAGATATTGAGCAGGCCACTGAGAATGATGATCTTTCCCAAGTTCAATGCATCAAGAGTTACCAGGCCCAAGAGCATGATGAGCTTACATTGGAGAAGGCTGATATTCTTCAAGCCAAGACCATTACAAGTGACGGCTGGGTGGAGGGCATTCGGCTGTCAGACGGGGAGCGGGGCTGGTTCCCCAAAACCAACGTGGAGGAGATCACAAGTCGCAGTGCGCGTCTCCGCAACCTCAGAGAAAACATCCGCGTTAAGTGTGTCACACAGAAACTGGAAGAGGAGCTCTTTTAAGTGTCCTTTCCATCCTGCAGGTTTTCATTTACACTTGGGATGTCCAATCAAACAGGGCAGCAACCCTCAACCCGTATCCATTAGACCCAGCTTTTATGCAACACCAGTTATACAATAGCTGAGCAGTTTTAGATTATCTGGATGTGGGAGTTTTATTTAGTCTGCAGGTGCTCATAAGGACATCATTTTTGGCATAGCTCGAGCATAAGCAATATTCTTAAGAAATATGGTTATCCAGCTGCATAGCAGTAATTTTCTATCACTCATGCTTGCAATGACTGCATATACAGTACAACTACTGTAACACATCAGAAACCAAGCATTTGTCTTTGCCCCCAAGCACTGTAATAGGAATAAACATAATTTCAGACATCACTTTCAACAGAACATTAAGAACTACAGTGTTTGTGCATCTTCCCTGTCTTTTGACTTTCACTGCTAGTTACACCCTATTGACAATAAGAGTTGTTTACGCGTAGACAAAAATTAAGACAGTAGCACATTATATTATTGTCCAACCACTACTACCATCTACATGCAGATGTTCACCATTCCAGTGACAcattaaatatttttaaaatatagtttaaaaaaaa

Function

NR:

description
rho guanine nucleotide exchange factor 19-like

GO: NA

KEGG:

id description
K20691 ARHGEF19, WGEF; Rho guanine nucleotide exchange factor 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566371.2 True 4601 mRNA 0.50 16 52168815 52206285

Neighbor

gene id symbol gene type direction distance location
LOC110492230 NA coding downstream 91261 52073740 ~ 52077554 (-)
LOC110492229 LOC106566874 coding downstream 99449 51998558 ~ 52069366 (-)
LOC110492226 LOC106572002 coding downstream 178790 51978399 ~ 51990025 (-)
LOC110492221 LOC106566882 coding downstream 430523 51721970 ~ 51738292 (-)
LOC110491091 LOC106566924 coding downstream 450858 51690883 ~ 51717957 (-)
plekhm2 LOC106566865 coding upstream 35313 52241598 ~ 52267535 (-)
ddost LOC106566864 coding upstream 61450 52267735 ~ 52273001 (-)
zbtb17 zbtb17 coding upstream 67035 52273320 ~ 52281951 (-)
hspb7 hspb7 coding upstream 76554 52282839 ~ 52284884 (-)
fam131c fam131c coding upstream 104772 52311057 ~ 52322537 (-)
G1386889 NA non-coding downstream 78983 52089251 ~ 52089832 (-)
G1386888 NA non-coding downstream 82779 52085821 ~ 52086036 (-)
G1386887 NA non-coding downstream 83500 52085109 ~ 52085315 (-)
G1386882 NA non-coding downstream 88446 52080137 ~ 52080369 (-)
G1386881 NA non-coding downstream 88699 52079916 ~ 52080116 (-)
G1388023 NA non-coding upstream 387283 52593568 ~ 52593778 (-)
G1388025 LOC106600668 non-coding upstream 391875 52598160 ~ 52598398 (-)
G1388036 NA non-coding upstream 405516 52611801 ~ 52612137 (-)
LOC110491093 LOC106572282 non-coding upstream 411390 52606434 ~ 52618106 (-)
G1388044 NA non-coding upstream 434390 52640675 ~ 52640919 (-)
G1385888 NA other downstream 1040167 51090645 ~ 51128648 (-)
dffb LOC106566885 other downstream 1053750 51113403 ~ 51117850 (-)
G1385645 NA other downstream 1112754 51055631 ~ 51056061 (-)
G1384875 NA other downstream 2102998 50064821 ~ 50065817 (-)
spen LOC106566857 other upstream 212591 52379551 ~ 52428869 (-)
LOC110492250 LOC106566852 other upstream 365425 52566433 ~ 52577143 (-)
G1388236 NA other upstream 825647 53031932 ~ 53032921 (-)
LOC110492299 LOC106566805 other upstream 1524052 53730164 ~ 53757019 (-)
G1389763 NA other upstream 2338443 54544728 ~ 54545243 (-)

Expression


Co-expression Network