Gene
RNA
| Item | Value |
|---|---|
| gene id | hspb7 |
| gene name | hspb7 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 52282839 ~ 52284884 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| hspb7 | Acts upstream of or within several processes, including Kupffer's vesicle development; cardioblast migration to the midline involved in heart rudiment formation; and determination of left/right symmetry. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including Kupffer's vesicle; adaxial cell; cardiovascular system; musculature system; and pericardial region. Used to study heart disease. Orthologous to human HSPB7 (heat shock protein family B (small) member 7). |
| description |
|---|
| Heat shock protein beta-7 |
| id | name | namespace |
|---|---|---|
| GO:0006950 | response to stress | biological_process |
| id | description |
|---|---|
| K09546 | HSPB7; heat shock protein beta-7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021566380.2 | True | 1052 | mRNA | 0.48 | 3 | 52282839 | 52284884 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zbtb17 | zbtb17 | coding | downstream | 888 | 52273320 ~ 52281951 (-) |
| ddost | LOC106566864 | coding | downstream | 9838 | 52267735 ~ 52273001 (-) |
| plekhm2 | LOC106566865 | coding | downstream | 15304 | 52241598 ~ 52267535 (-) |
| LOC110492234 | LOC106566870 | coding | downstream | 76554 | 52168815 ~ 52206285 (-) |
| LOC110492230 | NA | coding | downstream | 205285 | 52073740 ~ 52077554 (-) |
| fam131c | fam131c | coding | upstream | 26173 | 52311057 ~ 52322537 (-) |
| LOC110492242 | LOC106566859 | coding | upstream | 47542 | 52332426 ~ 52364482 (-) |
| spen | LOC106566857 | coding | upstream | 94667 | 52379551 ~ 52428869 (-) |
| tmem82 | LOC106566858 | coding | upstream | 152115 | 52436999 ~ 52440451 (-) |
| atp13a2 | atp13a2 | coding | upstream | 168080 | 52452964 ~ 52489265 (-) |
| G1386889 | NA | non-coding | downstream | 193007 | 52089251 ~ 52089832 (-) |
| G1386888 | NA | non-coding | downstream | 196803 | 52085821 ~ 52086036 (-) |
| G1386887 | NA | non-coding | downstream | 197524 | 52085109 ~ 52085315 (-) |
| G1386882 | NA | non-coding | downstream | 202470 | 52080137 ~ 52080369 (-) |
| G1386881 | NA | non-coding | downstream | 202723 | 52079916 ~ 52080116 (-) |
| G1388023 | NA | non-coding | upstream | 308684 | 52593568 ~ 52593778 (-) |
| G1388025 | LOC106600668 | non-coding | upstream | 313276 | 52598160 ~ 52598398 (-) |
| G1388036 | NA | non-coding | upstream | 326917 | 52611801 ~ 52612137 (-) |
| LOC110491093 | LOC106572282 | non-coding | upstream | 332791 | 52606434 ~ 52618106 (-) |
| G1388044 | NA | non-coding | upstream | 355791 | 52640675 ~ 52640919 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 292844 | 51978399 ~ 51990025 (-) |
| G1385888 | NA | other | downstream | 1154191 | 51090645 ~ 51128648 (-) |
| dffb | LOC106566885 | other | downstream | 1167774 | 51113403 ~ 51117850 (-) |
| G1385645 | NA | other | downstream | 1226778 | 51055631 ~ 51056061 (-) |
| G1384875 | NA | other | downstream | 2217022 | 50064821 ~ 50065817 (-) |
| LOC110492250 | LOC106566852 | other | upstream | 286826 | 52566433 ~ 52577143 (-) |
| G1388236 | NA | other | upstream | 747048 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 1445453 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 2259844 | 54544728 ~ 54545243 (-) |
