LOC110492284 (LOC106566930)


Basic Information

Item Value
gene id LOC110492284
gene name LOC106566930
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 53290006 ~ 53297286 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566473.2
GTATGTCCTCTTGACGTCTGTCTGGCCTGACATGCATACCTTCATTATCTGCTACTGTTTCGCAACCCTCAGCGCCCTTGCCCCTCGCTTGCCTATTTCTGGACCATGAGGCTGTCGCTGGAAGAGATAACGGAGCAAACCAGCTCACTGCGGCATTCTGCTCTCTGGACAGGACCAACCCCTACTCTCTGACTCTCACCAATACTGGTCTTTCTTGATCTGAGATTATTCCTACTCTGCCTTCTACAGCTTTCATTGATCTAAGAGTCTAGAGGCTTGTGTTTTGCGGAGGCCTATTGAGGACCACTGTTCATCATGGGTTCCGTGCGGTGTACGCCACCTGTCCCACTCCCCACAAACCTACCTGTCCTAGAGGCCAAAGTAGATGACTTGAGTCACAAGTTAGATGAGCTCCTCTCCAGACAAAAAGGTTCCTGCTCCATCTGCTCCACCTGCAGTCTGCACAGCGGCCAGCCAGAGGCAACAGAAAGGCAGCTTGTGGCCCAGTCCAGGCTGCTAGAGAACTTTGAGAGGAAGATCGGTGAGATGCAGAGGACCTTagaggccctggtcaaagGTCTGGCGCAAAGGAACCCCCACACCTGCCAGGAAGCTGCCCCTGCCCCACCCATTGAGCCATCACCTAGAACAGTATATCTGCCAGCCGAGACCTCACTAGTCACTTCTAAGGATGAGATCCCGGATCAGTtggagacaaacagacagcaGGATAAGACACAACACACTCCTACCACCCCAGCAAAGAAAGAGACGGATGCAAAGAAAACATTGACACGGCTGGCAGTAGCAGTTTTCCCATCAATGGCGCACACTCAAAAGATTTTGACTCAGACAAGGACCACAGTGACGAAGAACCAAGCGGTGACATCCATCGAAGAGTCACTTAGGACAGCATCTCTGCCAGTCAGTGATTCATTAAGCATGGAAAAGGCTGAGACCCTGAATCAGTTTGAGACGAACAGACACCAGGAAACAAAGCAACAGACTCCTATCGCTCCTGCAAAGAAAGAGCAAAGAGACTCTGTTGGAGAGCAGTGGATTGGAGGGAACCAGCAGGGGGTCAGAGGTCAACCAATGGCAGCAGATTCCCACAGACAGAGTGAAACTAAAAGGGGTTGGATGAGAGAGGTTCCACCTGTAGCGGTTGTCCCATCAATGGCGGACACTCCAAGGACTGAGACGAGGACCACAGTGGCGGAGAACCAAGCAGCTGCTCCATCAAGTCCCGCCCCCGCACCAAAAAAGCAGTCTGGGTTGGCTGTCCTTATGCCAACTGTGGAAAGCTCCTCCCTCAGACAAGTGCACAGCTGTCCAGAGTCCTTGCAGAGGCTCCAGAGTTCAAGGCCCAAGCCCCAGTCTGTCTGCCCTGCCCGTAGACCTGCTGTTGGGAAGACCTGCAGTGTTTTGGGAGGGGCTAGTCCAGTTGCAGCCAGTGGAATACAGATCATAGTAGTCCCTACTACAGCAGAAAGGACCCGGACCAAGTCCCCTACCAAAACTTGCCATAAGGTCATAGaTGACGTTCCCCCCCAGCCAGCTCCTTTCCTTCACCGCTGTGTGTCTTTGCGATCCAACCCCCCATCTGACACCTTCATCATCCACACCAGAGAGGTGCTGGGGAGCGGACGCTTTGGCAAGGTGCACAAATGCACTGAAAAATCCTCTGGACTAAAGCTTGCAGCTAAGATAATCAACACACGAACTGCTAAAGAaaagGAAAGGGCAAATAATGAGGTGCAGGCAATGAACCAGCTGAGTCATCCCAACATCCTCCAGCTCTACGAGGCCTTTGAGGCCAAGCACCAGCTGGTGTTAATTCTGGAATATGTTGAGGGCGGGGAGCTGTTTGACAGGATTGTGGATGAGAGCGCACCACTGACCGAGGTGGACGCCATGGTGTTTGTCAAGCAGATCTGTGAAGGGGTCAGCTACATGCATCAGATGTACGTCCTCCACCTCGACCTGAAACCGGAGAATATCCTTTGTGTGAATCGAACTGGCCATCAGGTGAAGATTATCGACTTTGGGCTGGCAAGAAGATACAGGCCGCGGGAGAAGCTCAGAGTCAATTTTGGAACCCCTGAATTTCTGGCCCCAGAGGTGGTCAACTTTGATTTTGTGTCCTTTCCCACAGACATGTGGACCTTAGGGGTTGTCACTTATATGCTTCTAAGTGGCCTTTCACCCTtcctgggtgatgatgagagccAGACCCTCAACAACGTCCTCTCTGCCAACTGTTCTTTTGAGGATGAGGCCTTTGAGCACATCTCAGCAGAGGCCAAGGACTTTATCTCCCACCTTCTGGtcaaggagaggggAGGGCGAATGAGTGCTTTACAGTGTCTAAGACATCCGtggctcaacaacattgcagAGAAGGCCAAGGGCAGCAATATAGTACTGAAGTCCCAGGTCCTGCTGAAGAAATACCTGGCCAAGAAACTATGGAAGAAAAACTACATTGCGATAGCAGCAGCCAACAGATTCAAGAAGATCAGCAGCGGTGGGGAACTGACCTCTCTGGATACGGAGACGGATACAGTACCTATAGCAACGTAACAATGTCACCCATTAATACAGTACCTGCACTGCCGCCTTACAATGTCACCCCTGTGAAATCTGTACTGACCTACGCTGGACAAACTGCATACTTGTAAAGACCTCCCACATAATCAGTCAGAGAAGGTACTCTTGTCATGGTCTGTCTGTGTAAACAAACCTGGACACAGTGTGTGAATAAATAGTGGCTACACAACATAATTTCACTCA

Function

NR:

description
myosin light chain kinase 2, skeletal/cardiac muscle-like

GO: NA

KEGG:

id description
K00907 MYLK; myosin-light-chain kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566473.2 True 2793 mRNA 0.51 17 53290006 53297286

Neighbor

gene id symbol gene type direction distance location
LOC110492280 LOC106566823 coding downstream 9421 53263801 ~ 53280585 (-)
LOC110492277 LOC106566826 coding downstream 63287 53219373 ~ 53226719 (-)
LOC110492279 LOC106566931 coding downstream 72271 53213332 ~ 53217735 (-)
LOC110492276 LOC106566827 coding downstream 78428 53206271 ~ 53211578 (-)
foxp3-2 foxp3-2 coding downstream 108350 53165504 ~ 53181656 (-)
LOC110492285 tpx2 coding upstream 6055 53303341 ~ 53313558 (-)
LOC110492286 LOC106566818 coding upstream 27038 53324324 ~ 53376992 (-)
LOC110491099 LOC106572329 coding upstream 141706 53438992 ~ 53440261 (-)
LOC110492292 LOC106566814 coding upstream 310124 53607410 ~ 53617096 (-)
LOC110492291 LOC106566813 coding upstream 320247 53617533 ~ 53633437 (-)
G1388354 LOC106566824 non-coding downstream 32318 53256419 ~ 53257688 (-)
G1388352 NA non-coding downstream 34706 53255090 ~ 53255300 (-)
G1388351 NA non-coding downstream 35021 53254729 ~ 53254985 (-)
G1388333 NA non-coding downstream 62535 53227156 ~ 53227471 (-)
G1388375 NA non-coding upstream 2038 53299324 ~ 53299977 (-)
G1388377 NA non-coding upstream 4717 53302003 ~ 53302208 (-)
G1388378 NA non-coding upstream 5142 53302428 ~ 53302760 (-)
G1388381 NA non-coding upstream 18539 53315825 ~ 53316414 (-)
G1388393 NA non-coding upstream 52410 53349696 ~ 53350276 (-)
G1388236 NA other downstream 257085 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 717699 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 861247 52379551 ~ 52428869 (-)
LOC110492226 LOC106572002 other downstream 1300011 51978399 ~ 51990025 (-)
dffb LOC106566885 other downstream 2174941 51113403 ~ 51117850 (-)
LOC110492299 LOC106566805 other upstream 433051 53730164 ~ 53757019 (-)
G1389763 NA other upstream 1247442 54544728 ~ 54545243 (-)
G1390030 ifrd2 other upstream 1687532 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 2526873 55824155 ~ 55826646 (-)
G1391586 NA other upstream 2767217 56064503 ~ 56064862 (-)

Expression


Co-expression Network