Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492289 |
| gene name | LOC106566817 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53451840 ~ 53502372 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ephrin type-B receptor 2-like isoform X2 |
| id | description |
|---|---|
| K05111 | EPHB2, ERK, DRT; Eph receptor B2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021566488.2 | False | 6853 | mRNA | 0.47 | 15 | 53451840 | 53502372 |
| XM_021566489.2 | True | 6844 | mRNA | 0.47 | 15 | 53451840 | 53502372 |
53,450,000
53,460,000
53,470,000
53,480,000
53,490,000
53,500,000
53,510,000
53,520,000
53,530,000
53,540,000
53,550,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492287 | LOC106566819 | coding | upstream | 24160 | 53366088 ~ 53427680 (+) |
| LOC110492282 | LOC106566822 | coding | upstream | 162191 | 53284822 ~ 53289649 (+) |
| pcmtd2a | LOC106566824 | coding | upstream | 188075 | 53256379 ~ 53263765 (+) |
| LOC110491098 | LOC106572224 | coding | upstream | 203312 | 53231455 ~ 53248528 (+) |
| LOC110492275 | LOC106566828 | coding | upstream | 252924 | 53187540 ~ 53205388 (+) |
| LOC110491100 | LOC106566816 | coding | downstream | 3198 | 53505570 ~ 53518173 (+) |
| vps13d | vps13d | coding | downstream | 29685 | 53532057 ~ 53599772 (+) |
| LOC110492294 | LOC106566810 | coding | downstream | 167254 | 53669626 ~ 53676945 (+) |
| LOC110492297 | LOC106566807 | coding | downstream | 201060 | 53703432 ~ 53705004 (+) |
| LOC110492298 | LOC106566929 | coding | downstream | 205604 | 53707976 ~ 53709273 (+) |
| G1387631 | NA | non-coding | upstream | 19015 | 53432170 ~ 53432825 (+) |
| G1387560 | NA | non-coding | upstream | 21471 | 53429424 ~ 53430369 (+) |
| G1387564 | NA | non-coding | upstream | 22480 | 53429060 ~ 53429360 (+) |
| G1387626 | NA | non-coding | upstream | 42970 | 53408621 ~ 53408870 (+) |
| G1387625 | NA | non-coding | upstream | 43231 | 53408385 ~ 53408609 (+) |
| G1387654 | NA | non-coding | downstream | 15831 | 53518203 ~ 53520558 (+) |
| G1387688 | NA | non-coding | downstream | 25523 | 53527895 ~ 53528224 (+) |
| G1387689 | NA | non-coding | downstream | 26345 | 53528717 ~ 53528949 (+) |
| G1387694 | NA | non-coding | downstream | 65088 | 53567460 ~ 53569213 (+) |
| G1387713 | NA | non-coding | downstream | 111780 | 53614152 ~ 53616919 (+) |
| G1387575 | NA | other | upstream | 125249 | 53321781 ~ 53326591 (+) |
| G1387286 | NA | other | upstream | 660551 | 52790938 ~ 52791289 (+) |
| G1386998 | NA | other | upstream | 1165383 | 52282193 ~ 52286457 (+) |
| LOC110492224 | NA | other | upstream | 1531068 | 51916126 ~ 51920772 (+) |
| G1386254 | LOC106566883 | other | upstream | 1890962 | 51560153 ~ 51560878 (+) |
| LOC110492303 | LOC106566801 | other | downstream | 543643 | 54045935 ~ 54061849 (+) |
| G1388806 | NA | other | downstream | 660714 | 54163086 ~ 54229861 (+) |
| G1388917 | LOC106566792 | other | downstream | 796802 | 54299174 ~ 54302158 (+) |
| G1388919 | LOC106566792 | other | downstream | 804078 | 54306450 ~ 54306908 (+) |
| LOC110492320 | LOC106566780 | other | downstream | 1279328 | 54769016 ~ 54821566 (+) |
