commd7 (comd7)


Basic Information

Item Value
gene id commd7
gene name comd7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 53956911 ~ 53968135 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564407.2
GAGTTGAATAGCAAGATAGCTTCATTTGAGTATACCATCACGGAAGTAGCCACTAAAGTAAACATTTCCAGGCCGACAGCTATAATGTTGCAACTGCAATTTACCAAAGATACTTTACCAGATTCTGTGAGCAATGACTTTCAGAACTTGAACAAATTCAACGAACAGGCGGACAGGTTCCTGCATCAGCTGAGTGAGTTTGCAGGAGAGAATGGGATGAGTGCAGGCCCACTGAGGAACCTCATGAAGAGCCTCCTGCTGCTTCCCCATGgTTCCCTGAAGAAAAATCTGACAGAAGACCAAGTCAAAGAGGACCTTCTCACTTTAGGAGTCAGTGAAGACAAGGCAGACCATTTTTCACAACAGtggAGCCTCCACTACCCTGTGTTGTCCAGGCTGGCTGTAGGACAGACACTGATGGTcaaccagctggtggacatggaGTGGAAGTTTGGTGTGACCGTGGGGACGAGTGAACTTCAGAAAGTTGGAAACACCTTTCTACAGCTTAAGTTGGTCATCAGAAAGGGGAACTCAACTGAAAATGTCTACATGGaGTTGACCCTCCCCCAGTTTTACAACTTTCTCCATGAAATGGAGAGGGCCAAAGCCAGTATGGACTGTTTCAGCTGAGCCTGATCGCCAGTAGCAAGAGCATGTACTGAATATGTGTCCTAGAGGGGCAGCAGAAAACAAAAGAGGAGATGGAAGTGATTGACACTGGATGGATCCCaattggcactctattccctttatagtgaacAGGGGCAATTTGGGGCATGCATGCAGTTCAAAATAGAACATACTGAATCTGAATGAACCTTCCAGCTTCTCACATACCAAGATTTCAATATTTCTTTTGTGTAATTTTGACATTTGTCTTTTGAAATGTGCACAATTGTTTTGCAGTAGTGATTTTGTGTGTATTAGTAACTGTCCGTGAGTTTGTTTTGCGAGAAAGTATTATATTGTAACCCAATGACTTCAATTCCATTGGCTGTCACGACAAGTGATGTGAGGCATACGTGTAACAATTTTTTGCAATCTCTCATCATTTATATTACTGATTTGCTTAACTTTATTTTTAACTAAATCAAATGGAACATGATTCACACTTGCACTTACTTTTTTCTCTCCAAATAAAGTATTCAGATGTTGTCATATTGGTCTGCTGTAGGTATTCACATAATGAATGAATGATAGAAATTCTGAATAATATCCTCAGACAATTACACAACAAGATAGTCAGTTATTACGCTGATATAGAACATACTGTAAAATTGGTTCTAATAACAGGTTTCAGTAGATATTCCACTGACACCAACATGAGACAACGATGGGGAGCCAAATACACTGTAGAGAGAAGCATGTGAATACTAGTTGTTATTCCATCCTACTTTTATACCTTAATTAGCCAAGAAGTCACATTAAATGTACACCCATCCATTTCCCCAAAAGGAAATAGTTCATACTAGCATTTGGGCCTGCAACAATGATCTGTCATTTGTGGACATTCTGTATTCATTAAATGTTGTGAATAAGAGCTTGAAGCAGAAAACAACTTTAATATTGTAATCTCTACCATCCTtaccctaactggagtaaactaaCAGACAGCAATACTTCTACTTCACTCACATCTATGGTACCTGTAGTTAAATATTTATAGATGTATTCCTAATTTCCTCAAGTGCTTGATCTTTACCCACAGCGTCCACTCCACTATTCATTCTGATCTTAACTCCAAatctttattttacctttatttaactaggcaagtcagttaagaacaaattcttattttcaacgacggcctacGAACAGTGcccctgccttgttcaggggcagaaaaacagatttttaccttgtcagctcggggtttcgatcttgcaacctttcagttactagtccaatgctctaaccactaggctacctgctggcctGGATTGATTTGTCAATTATTGTTTTATATGTCAGTTCATACACCCTATGCCACGGTATTGGTACATCAAAAAACtgtttccaactgtcttgaattATATACGGTATTACTGTCAAACTTTTTGACTTTAAGTGAAACTGATACATTTTGTCAATTTATAATTTGAAGtaatttatgattttttttatggGTGGTAGACAGACAAATTAAATAAAGTAATTGTctctt
>NM_001165191.2
ATACCATCACGGAAGTAGCCACTAAAGTAAACATTTCCAGGCCGACAGCTATAATGTTGCAACTGCAATTTACCAAAGATACTTTACCAGATTCTGTGAGCAATGACTTTCAGAACTTGAACAAATTCAACGAACAGCAATTCACAAGTCTGACTGAGATTCTTTTCAATTTCCTGTTGGAGCCAAAAGAGGCGGACAGGTTCCTGCATCAGCTGAGTGAGTTTGCAGGAGAGAATGGGATGAGTGCAGGCCCACTGAGGAACCTCATGAAGAGCCTCCTGCTGCTTCCCCATGgTTCCCTGAAGAAAAATCTGACAGAAGACCAAGTCAAAGAGGACCTTCTCACTTTAGGAGTCAGTGAAGACAAGGCAGACCATTTTTCACAACAGtggAGCCTCCACTACCCTGTGTTGTCCAGGCTGGCTGTAGGACAGACACTGATGGTcaaccagctggtggacatggaGTGGAAGTTTGGTGTGACCGTGGGGACGAGTGAACTTCAGAAAGTTGGAAACACCTTTCTACAGCTTAAGTTGGTCATCAGAAAGGGGAACTCAACTGAAAATGTCTACATGGaGTTGACCCTCCCCCAGTTTTACAACTTTCTCCATGAAATGGAGAGGGCCAAAGCCAGTATGGACTGTTTCAGCTGAGCCTGATCGCCAGTAGCAAGAGCATGTACTGAATATGTGTCCTAGAGGGGCAGCAGAAAACAAAAGAGGAGATGGAAGTGATTGACACTGGATGGATCCCaattggcactctattccctttatagtgaacAGGGGCAATTTGGGGCATGCATGCAGTTCAAAATAGAACATACTGAATCTGAATGAACCTTCCAGCTTCTCACATACCAAGATTTCAATATTTCTTTTGTGTAATTTTGACATTTGTCTTTTGAAATGTGCACAATTGTTTTGCAGTAGTGATTTTGTGTGTATTAGTAACTGTCCGTGAGTTTGTTTTGCGAGAAAGTATTATATTGTAACCCAATGACTTCAATTCCATTGGCTGTCACGACAAGTGATGTGAGGCATACGTGTAACAATTTTTTGCAATCTCTCATCATTTATATTACTGATTTGCTTAACTTTATTTTTAACTAAATCAAATGGAACATGATTCACACTTGCACTTACTTTTTTCTCTCCAAATAAAGTATTCAGATGTTGTC
>XM_036945764.1
GAATGTGCTGAGTTGAATAGCAAGATAGCTTCATTTGAGTATACCATCACGGAAGTAGCCACTAAAGTAAACATTTCCAGGCCGACAGCTATAATGTTGCAACTGCAATTTACCAAAGATACTTTACCAGATTCTGTGAGCAATGACTTTCAGAACTTGAACAAATTCAACGAACAGCAATTCACAAGTCTGACTGAGATTCTTTTCAATTTCCTGTTGGAGCCAAAAGAGGCGGACAGGTTCCTGCATCAGCTGAGTGAGTTTGCAGGAGAGAATGGGATGAGTGCAGGCCCACTGAGGAACCTCATGAAGAGCCTCCTGCTGCTTCCCCATGgTTCCCTGAAGAAAAATCTGACAGAAGACCAAGTCAAAGAGGACCTTCTCACTTTAGGAGTCAGTGAAGACAAGGCAGACCATTTTTCACAACAGtggAGCCTCCACTACCCTGTGTTGTCCAGGCTGGCTGTAGGACAGACACTGATGGTcaaccagctggtggacatggaGTGGAAGTTTGGTGTGACCGTGGGGACGAGTGAACTTCAGAAAGTTGGAAACACCTTTCTACAGCTTAAGTTGGTCATCAGAAAGGGGAACTCAACTGAAAATGTCTACATGGttctttaaaaaaaattttttttagaGTTGACCCTCCCCCAGTTTTACAACTTTCTCCATGAAATGGAGAGGGCCAAAGCCAGTATGGACTGTTTCAGCTGAGCCTGATCGCCAGTAGCAAGAGCATGTACTGAA

Function

NR:

description
COMM domain-containing protein 7

GO: NA

KEGG:

id description
K22563 COMMD7; COMM domain containing 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564407.2 False 2170 mRNA 0.39 8 53956911 53968126
NM_001165191.2 False 1183 mRNA 0.42 9 53957921 53968095
XM_036945764.1 True 753 mRNA 0.45 9 53958415 53968135
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Neighbor

gene id symbol gene type direction distance location
LOC110491103 LOC106566803 coding downstream 37564 53776875 ~ 53919347 (-)
LOC110492300 LOC106566804 coding downstream 180710 53758360 ~ 53776201 (-)
LOC110492299 LOC106566805 coding downstream 199892 53730164 ~ 53757019 (-)
LOC110491101 LOC106566920 coding downstream 228938 53711870 ~ 53727973 (-)
LOC110492296 LOC106566808 coding downstream 261147 53689172 ~ 53695764 (-)
LOC110491105 LOC106566796 coding upstream 199245 54163558 ~ 54236936 (-)
LOC110492306 LOC106566792 coding upstream 312210 54280345 ~ 54456016 (-)
LOC118936330 NA coding upstream 667250 54635385 ~ 54635876 (-)
LOC110491107 NA coding upstream 671336 54639471 ~ 54640714 (-)
si:dkey-20d21.12 LOC106566776 coding upstream 987727 54946478 ~ 54957989 (-)
G1389332 NA non-coding downstream 110793 53845871 ~ 53846118 (-)
G1389331 NA non-coding downstream 111752 53844859 ~ 53845159 (-)
G1389316 NA non-coding downstream 131017 53825674 ~ 53825894 (-)
G1389315 NA non-coding downstream 131352 53825345 ~ 53825559 (-)
G1389313 NA non-coding downstream 132872 53823811 ~ 53824039 (-)
G1389477 NA non-coding upstream 69259 54037394 ~ 54037660 (-)
G1389479 NA non-coding upstream 71115 54039250 ~ 54039467 (-)
G1389489 LOC106566801 non-coding upstream 88102 54056237 ~ 54058839 (-)
G1389490 NA non-coding upstream 90784 54058919 ~ 54059264 (-)
G1389491 NA non-coding upstream 92103 54060238 ~ 54060683 (-)
G1388236 NA other downstream 923990 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 1384604 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 1528152 52379551 ~ 52428869 (-)
LOC110492226 LOC106572002 other downstream 1966916 51978399 ~ 51990025 (-)
G1389763 NA other upstream 576593 54544728 ~ 54545243 (-)
G1390030 ifrd2 other upstream 1016683 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 1856024 55824155 ~ 55826646 (-)
G1391586 NA other upstream 2096368 56064503 ~ 56064862 (-)
G1391624 NA other upstream 2257279 56225414 ~ 56226061 (-)

Expression

commd7(comd7) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 75.
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commd7(comd7) Expression in each Bioproject

Bar chart with 21 bars.
commd7(comd7) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
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Co-expression Network