Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492305 |
| gene name | LOC106566799 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54098942 ~ 54119178 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| acetyl-coenzyme A synthetase, cytoplasmic-like |
| id | description |
|---|---|
| K01895 | ACSS1_2, acs; acetyl-CoA synthetase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036947292.1 | False | 5498 | mRNA | 0.45 | 18 | 54098942 | 54119178 |
| XM_036947293.1 | False | 5452 | mRNA | 0.45 | 17 | 54098943 | 54119178 |
| XM_021566515.2 | True | 5499 | mRNA | 0.45 | 18 | 54098944 | 54119178 |
54,080,000
54,084,000
54,088,000
54,092,000
54,096,000
54,100,000
54,104,000
54,108,000
54,112,000
54,116,000
54,120,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491104 | LOC106566798 | coding | upstream | 151 | 54078267 ~ 54098791 (+) |
| LOC110492304 | mapre1 | coding | upstream | 20938 | 54070333 ~ 54078004 (+) |
| LOC110492303 | LOC106566801 | coding | upstream | 37093 | 54045935 ~ 54061849 (+) |
| dnmt3bb.1 | LOC106566802 | coding | upstream | 64597 | 53971951 ~ 54034345 (+) |
| LOC110492298 | LOC106566929 | coding | upstream | 389669 | 53707976 ~ 53709273 (+) |
| LOC110492309 | LOC106566795 | coding | downstream | 122907 | 54242085 ~ 54279034 (+) |
| LOC110492307 | LOC106566793 | coding | downstream | 353621 | 54472799 ~ 54553472 (+) |
| LOC110492310 | tmem115 | coding | downstream | 437129 | 54556307 ~ 54560676 (+) |
| LOC110492312 | LOC106566794 | coding | downstream | 442844 | 54562022 ~ 54566575 (+) |
| LOC110491106 | LOC106566791 | coding | downstream | 464431 | 54583609 ~ 54620206 (+) |
| G1388800 | NA | non-coding | upstream | 36418 | 54062272 ~ 54062524 (+) |
| G1388799 | NA | non-coding | upstream | 36673 | 54062016 ~ 54062269 (+) |
| G1388787 | NA | non-coding | upstream | 61282 | 54037396 ~ 54037660 (+) |
| G1388786 | NA | non-coding | upstream | 61691 | 54036972 ~ 54037251 (+) |
| G1388681 | NA | non-coding | upstream | 240315 | 53858395 ~ 53858627 (+) |
| G1388837 | NA | non-coding | downstream | 24205 | 54143383 ~ 54143767 (+) |
| G1388894 | NA | non-coding | downstream | 120721 | 54239899 ~ 54240113 (+) |
| G1388892 | NA | non-coding | downstream | 159999 | 54279177 ~ 54279985 (+) |
| G1388928 | NA | non-coding | downstream | 211912 | 54331090 ~ 54331311 (+) |
| G1388938 | NA | non-coding | downstream | 229136 | 54348314 ~ 54348537 (+) |
| G1387575 | NA | other | upstream | 772351 | 53321781 ~ 53326591 (+) |
| G1387286 | NA | other | upstream | 1307653 | 52790938 ~ 52791289 (+) |
| G1386998 | NA | other | upstream | 1812485 | 52282193 ~ 52286457 (+) |
| LOC110492224 | NA | other | upstream | 2178170 | 51916126 ~ 51920772 (+) |
| G1388806 | NA | other | downstream | 43908 | 54163086 ~ 54229861 (+) |
| G1388917 | LOC106566792 | other | downstream | 179996 | 54299174 ~ 54302158 (+) |
| G1388919 | LOC106566792 | other | downstream | 187272 | 54306450 ~ 54306908 (+) |
| LOC110492320 | LOC106566780 | other | downstream | 662522 | 54769016 ~ 54821566 (+) |
| G1390376 | actr8 | other | downstream | 1232022 | 55351200 ~ 55351729 (+) |
