LOC110491107


Basic Information

Item Value
gene id LOC110491107
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 54639471 ~ 54640714 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110491107
ATGGCGTGGACTGAGCTCGTGGTCCAGGCAGGGTTCAACACTGGGCCACACAGGGCCCTCCTACCATTCCTCCTCTTGATGTTCCTCACCTCCCGCTGCCTTGGTGGTCCCACAAAGCCTGCCCGCATCTCTCTGTCACCAGGGCAGCCTTTCCTAGTACTATGGGGAGTAGCCAACAAGGCGGGTTCTGGACGTCCCGACCCAGGAGCCattgggatggagagagaaggctGCTTGGCCATGTTTTATGAGGACACTCTGGGGAAGTACCCTTATTACACTGACCAGGACCAGCCTGTGAACGGAGGCCTTCCCCAACAACTCAGACCGGAAGGACACCTCCAGAATACACAGGAGGACCTCGCGGCCGCGCTACCCTCTCCGGGGTACCAGGGAATGGGGGTACTGGGTTGGGGCCAGTGTTCCCAGCAGTGGGGAAGGAACCGTGAGAAACAGGGCATCTACATGGAGGGCTCTACTGAGGACATTCTTCCCTAACTGGACcacagaggaggtggagaagtgGTCTCAGGTGGACTTTGAGATGGCGGCCCAGTCCATCCTTATGGAGACACTGTAGGAGATGAGGCTCCGCCCCACAGAGCGCAGAGTGTCCTAGTACCCCAACTACTACAACTCTGGCCCCCCCAGTCGATATCCAATTACACGGGCCGCTGTCTCGCTGCTGAAATGGCGTTGAACGACGTGCCGCTATGGCTATGGAAACGCTGCTCAGCCCTCTACCTTGCCCTCACGTTAGAGAAGCTGCAGGGCGGGATCTCAAGGGCCAGACTGTACACATCTAATCAGATCCGAGAGGCACTGAGAGTGACAGGCTTGGCTGAGACCGCCTACGACCTTCCTGTGTTCCTATTAGTCAGTAGTGTCTATACGCCAACTAACTCTTTTCTGTATGAGGTGGACTTGGTCAACGGTATTAGTTAGAGTGCTGCCATGGGGGTAGCAGGGGTTATCCTCTGGGAGAACGATCCAAGTGTCTTCTCTACAAGGACCAGTGGCAATTTTAGtgtgtaa

Function

NR:

description
hyaluronidase-1-like

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110491107 True 1035 mRNA 0.56 3 54639471 54640714

Neighbor

gene id symbol gene type direction distance location
LOC118936330 NA coding downstream 3595 54635385 ~ 54635876 (-)
LOC110492306 LOC106566792 coding downstream 183455 54280345 ~ 54456016 (-)
LOC110491105 LOC106566796 coding downstream 402535 54163558 ~ 54236936 (-)
commd7 comd7 coding downstream 671336 53956911 ~ 53968135 (-)
LOC110491103 LOC106566803 coding downstream 720124 53776875 ~ 53919347 (-)
si:dkey-20d21.12 LOC106566776 coding upstream 315148 54946478 ~ 54957989 (-)
sema3b LOC106566773 coding upstream 526049 55166763 ~ 55255352 (-)
actr8 actr8 coding upstream 709430 55350144 ~ 55372295 (-)
LOC110492331 LOC106566684 coding upstream 735021 55375735 ~ 55383021 (-)
LOC110491111 LOC106566685 coding upstream 756923 55397637 ~ 55517109 (-)
G1389777 NA non-coding downstream 59645 54579622 ~ 54579826 (-)
G1389771 NA non-coding downstream 70181 54568591 ~ 54569290 (-)
G1389770 NA non-coding downstream 71107 54568143 ~ 54568364 (-)
G1389766 LOC106566794 non-coding downstream 72903 54561502 ~ 54566568 (-)
G1389769 NA non-coding downstream 83400 54552120 ~ 54556071 (-)
G1389837 NA non-coding upstream 29312 54670026 ~ 54700613 (-)
G1389841 LOC106566786 non-coding upstream 40617 54681331 ~ 54682335 (-)
G1389861 NA non-coding upstream 70463 54711177 ~ 54718477 (-)
G1389871 NA non-coding upstream 95299 54736013 ~ 54757120 (-)
G1389935 NA non-coding upstream 172618 54813332 ~ 54821867 (-)
G1389763 NA other downstream 94228 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 906556 53730164 ~ 53757019 (-)
G1388236 NA other downstream 1606550 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 2067164 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 2210712 52379551 ~ 52428869 (-)
G1390030 ifrd2 other upstream 344104 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 1183445 55824155 ~ 55826646 (-)
G1391586 NA other upstream 1423789 56064503 ~ 56064862 (-)
G1391624 NA other upstream 1584700 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 1640338 56240763 ~ 56293503 (-)

Expression


Co-expression Network