LOC110492334 (dkga)


Basic Information

Item Value
gene id LOC110492334
gene name dkga
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 55568377 ~ 55582222 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566561.2
atgcaacatttattggatgccaaccgcggttaaacctcatcgaagaagaagcagaagaagaacgACATGCATAAACTGCATAacatgttttgtaatgtttttttattaCAGTTAGCCGTAGATAGCTCAACACACTCCGAGGCTGTCTTGTGTAAACCATCTACACAGTAACTACATCGCAAAGAAAGGATGGCTCAAGTGCCCAAAGTTAGGCTGGCAGGGGGCTTGGAGATCTGCCGCGTCCTGAACGGCATGTGGCAGGTATCAGGTGCTCATGGTCCGGTGGATCATCCCAAAGCAGTGCAGGCGATGCAAGCCTATATTGATGCTGGCCTAACAACTTTTGACATGGCAGATATCTATGGACCAGCGGAGGAGATTTTTGGACGCTTCAACAGCCAGCTGAAATGGAAACCCAGCTGTGATGCTGCATCACCCCTGCAAGGTTTGACCAAATGGGTGCCACGACCTGGACCAATGGACCGCAAGGTTGTGGAGAAGGCGTTGCAGCGTTCCATGGCCCGTATGCAGGTGGATTCTCTGGACTGTGTGCAGTTCCACTGGTGGGACTACAGCGATAATAGATACCTGCATGCCCTGGGGCACCTGTCTGACCTGCAGCAGGATGGACTTATACGAGAGCTGGCCCTTACCAACTTTGACACTCAGAGGCTTGAGGAGATCACAAACAAAGGGATCAGAATCTCCAGTAACCAGGTGCAGTACTCTCTGCTTGACCAGCGGCCCGCTGCTAAGATGGAGGCGGTCTGCCTGTCTCACGGCATCCAGCTCCTCACCTATGGAACTCTGGCCGGTGGCCTACTCTCAGAGCGCTATCTGGGGAAGGCGGAGCCTACAAGCAGGGTGGAGCTCAACACGGCCTCCCTCAGTAAATACAAGAAGGTGATTGATGGCTGGGGAGGATGGGGGCTGTTCCAGGAGCTGCTGGTTGTCTTGGACAGTGTTGCCCAGGGCCACAGCTGCTCCATTGCCAACGTGGCTACTCGCTACATTCTGGACCGGCCAGCAGTGGCTGGAGTCATCGTGGGCTGTCGTCTCGGTGTTGCTGGGGCGGAACACATCAAGGACAGCCTGCACAGCTGCAGCCCAGAGTTGGAGCTCACGGCGCAAGACCTGCGCACCATCGACGGCGTGCTGCAGCGCTCGTGTGACCTCATGAGCCTTATCGGAGATTGTGGAGACGAGTACAGGAACTAGAGAAGAATAGAGAAGATGGACCAGAGCATCTGGGTTGGAGGGAAGTAGAGATGGGGTACTGGTGGAAGAACATATACATGTGTGAATAAATGTTTGTATAGATGTTGGTGGGAAGTTAGAGGATGGCAGGAGTAGAAGGAAATGTGGTGGGAAGAGAAGGCATGGGGGGCTGAAACTGAAAATGACAGATGGGAGGGGCATGAGGGGGAATGACAGCATGAACTATGACAGGGCACACAGATATACAgcattttacttttatttttaaaaatagtGTCAACGTGTAATAAATGTTACCCTGTACCCATATAATTAAGAATGTAATGTATATAGCGTCATTATGTCTCTGTGTATGGAAAGGGCTTTTAAGTAAAATAAGATCTTGACCTAAA
>XM_036947330.1
GACATTCCCTGTGCATAGAAACATCAAAATTCACCGCAGATGGCGCTTGAATCGATTGATCCTGCCTTTCGACATCTTGTTTGGGTGTGGAAGACCATGGAAAACCTGGACTTTGAATTACAAAATTATAAGGATGGCTCAAGTGCCCAAAGTTAGGCTGGCAGGGGGCTTGGAGATCTGCCGCGTCCTGAACGGCATGTGGCAGGTATCAGGTGCTCATGGTCCGGTGGATCATCCCAAAGCAGTGCAGGCGATGCAAGCCTATATTGATGCTGGCCTAACAACTTTTGACATGGCAGATATCTATGGACCAGCGGAGGAGATTTTTGGACGCTTCAACAGCCAGCTGAAATGGAAACCCAGCTGTGATGCTGCATCACCCCTGCAAGGTTTGACCAAATGGGTGCCACGACCTGGACCAATGGACCGCAAGGTTGTGGAGAAGGCGTTGCAGCGTTCCATGGCCCGTATGCAGGTGGATTCTCTGGACTGTGTGCAGTTCCACTGGTGGGACTACAGCGATAATAGATACCTGCATGCCCTGGGGCACCTGTCTGACCTGCAGCAGGATGGACTTATACGAGAGCTGGCCCTTACCAACTTTGACACTCAGAGGCTTGAGGAGATCACAAACAAAGGGATCAGAATCTCCAGTAACCAGGTGCAGTACTCTCTGCTTGACCAGCGGCCCGCTGCTAAGATGGAGGCGGTCTGCCTGTCTCACGGCATCCAGCTCCTCACCTATGGAACTCTGGCCGGTGGCCTACTCTCAGAGCGCTATCTGGGGAAGGCGGAGCCTACAAGCAGGGTGGAGCTCAACACGGCCTCCCTCAGTAAATACAAGAAGGTGATTGATGGCTGGGGAGGATGGGGGCTGTTCCAGGAGCTGCTGGTTGTCTTGGACAGTGTTGCCCAGGGCCACAGCTGCTCCATTGCCAACGTGGCTACTCGCTACATTCTGGACCGGCCAGCAGTGGCTGGAGTCATCGTGGGCTGTCGTCTCGGTGTTGCTGGGGCGGAACACATCAAGGACAGCCTGCACAGCTGCAGCCCAGAGTTGGAGCTCACGGCGCAAGACCTGCGCACCATCGACGGCGTGCTGCAGCGCTCGTGTGACCTCATGAGCCTTATCGGAGATTGTGGAGACGAGTACAGGAACTAGAGAAGAATAGAGAAGATGGACCAGAGCATCTGGGTTGGAGGGAAGTAGAGATGGGGTACTGGTGGAAGAACATATACATGTGTGAATAAATGTTTGTATAGATGTTGGTGGGAAGTTAGAGGATGGCAGGAGTAGAAGGAAATGTGGTGGGAAGAGAAGGCATGGGGGGCTGAAACTGAAAATGACAGATGGGAGGGGCATGAGGGGGAATGACAGCATGAACTATGACAGGGCACACAGATATACAgcattttacttttatttttaaaaatagtGTCAACGTGTAATAAATGTTACCCTGTACCCATATAATTAAGAATGTAATGTATATAGCGTCATTATGTCTCTGTGTATGGAAAGGGCTTTTAAGTAAAATAAGATCTTGACCTAAA

Function

symbol description
dkga 2,5-diketo-D-gluconate reductase A

NR:

description
uncharacterized protein LOC110492334

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566561.2 False 1610 mRNA 0.51 8 55568377 55573334
XM_036947330.1 True 1554 mRNA 0.51 8 55568377 55582222

Neighbor

gene id symbol gene type direction distance location
LOC110491111 LOC106566685 coding downstream 51268 55397637 ~ 55517109 (-)
LOC110492331 LOC106566684 coding downstream 185356 55375735 ~ 55383021 (-)
actr8 actr8 coding downstream 196082 55350144 ~ 55372295 (-)
sema3b LOC106566773 coding downstream 313025 55166763 ~ 55255352 (-)
si:dkey-20d21.12 LOC106566776 coding downstream 610388 54946478 ~ 54957989 (-)
LOC110492337 sgk2 coding upstream 13347 55595569 ~ 55607324 (-)
LOC110492338 LOC106566690 coding upstream 26965 55609187 ~ 55626735 (-)
LOC110492341 LOC106571981 coding upstream 44693 55626915 ~ 55632905 (-)
LOC110492339 rae1 coding upstream 51592 55633814 ~ 55638471 (-)
LOC110492342 LOC106566692 coding upstream 63923 55646145 ~ 55649415 (-)
G1390745 NA non-coding downstream 580 55566446 ~ 55567797 (-)
G1390744 NA non-coding downstream 2129 55564530 ~ 55566248 (-)
G1390755 NA non-coding downstream 30673 55537191 ~ 55537704 (-)
G1390756 NA non-coding downstream 31394 55536739 ~ 55536983 (-)
G1390754 LOC106566686 non-coding downstream 34662 55533203 ~ 55533715 (-)
G1390797 NA non-coding upstream 19952 55602174 ~ 55613967 (-)
G1390817 NA non-coding upstream 84285 55666507 ~ 55666872 (-)
G1390818 NA non-coding upstream 84906 55667128 ~ 55667643 (-)
G1390841 LOC106613263 non-coding upstream 133020 55715242 ~ 55715658 (-)
G1390845 NA non-coding upstream 137310 55719532 ~ 55719754 (-)
G1390030 ifrd2 other downstream 582114 54984818 ~ 54986263 (-)
G1389763 NA other downstream 1023134 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 1835462 53730164 ~ 53757019 (-)
G1388236 NA other downstream 2535456 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 2996070 52566433 ~ 52577143 (-)
LOC110492352 nua4l other upstream 241937 55824155 ~ 55826646 (-)
G1391586 NA other upstream 482281 56064503 ~ 56064862 (-)
G1391624 NA other upstream 643192 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 698830 56240763 ~ 56293503 (-)
G1391796 LOC100286403 other upstream 842050 56424272 ~ 56437279 (-)

Expression


Co-expression Network