LOC110492337 (sgk2)


Basic Information

Item Value
gene id LOC110492337
gene name sgk2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 55595569 ~ 55607324 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566566.2
CACTGAAATCTGTAGCCTAATGCAGGACAACAGTGCTGTGCTCTGAGCTGGGACACTTGACTCAATCTGCGGGGCTTCAGTCAGTCGACAAGACATCGCTCCTGCTGCACGCACCTGCAACAAGTGGCCTAAGCTTCGTTTTAACATTCACGAAAGGTCTATGAAACACTGATGTAGGTTCCCCGGTGAGCACGGAATGGACCGAGACCATGGCAAATTCTAATCCACTTAGATCACCATCCTCCACCCTCAGTGAGGTCAACCTGGGACCTTCAGCAAACccacaTGCCAAGCCCACTGACTTTGACTTTTTGGCTGTTATTGGAAAAGGGACCTTTGGGAAGGTCCTGCTCGCCAAGCTCAAAGCTGACAATAAATTCTATGCTGTGAAAGTTCTACAGAAGAAAGTAATCCTGAAGAAAAAGGAGCAAAAGAACATCATGGCAGAGAGGAACGTGCTGCTGAAGAGCCTGAAGCATCCTTTCCTGGTGGGCCTCCACTACTCCTTCCAGACCCCAGAGAAGCTCTACTTTGTCCTCGACTATGTCAACGGGGGAGAGCTCTTCTTCCACCTGCAGAGGGAGCGGTGCTTCTTGGAGCCGAGGGCTCGGTTCTATGCTGCTGAGGTAGCCAGTGCCATCGGCTACCTTCACTCCCTCAACATCGTTTACAGagATCTGAAGCCAGAGAATATTCTCTTAGACTCTCAGGGCCATGTGGTACTTACAGACTTTGGGCTGTGTAAAGAGGGAGTGGAGCCAGAGACCACCACGTCCACTTTCTGTGGAACCCCTGAGtaTTTGGCCCCTGAGGTTCTGCGTAAGGAGCCCTATGACCGCACAGTGGACTGGTGGTGTCTGGGAGCTGTGCTCTATGAGATGATCTATAGTCTTCCCCCGTTCTACAGCCGGGACGTGTCTGAGATGTACGATGGCATCCTACACAAGCCTCTGCCGCTGCCCCCAGGGAAGTCAGGCGCTCTCTGTAGTCTGCTCCAGGGCCTCCTGCAGAAAGACCAACACCGCAGGTTGGGAGCCATTGCTGACTTTctacaAATAAAGAACCATGTGTTCTTCTCCCCGATTAACTGGGATGATCTGTACCACAAGAGAATCACTCCTCCATACAACCCCAATGTGaAAGGGCCAGCGGACACACAGCACATAGACCCAGAGTTCACCAGAGAGATGGTGCCTAACTCAGTGGGCTGCACCCCTGAGCTCAACGCCGGCACCAGCAGCTCTAACGCATTCAATGGCTTCTCCTACGTTTCTGGTGAAGACAGCTTCCTTTGAGACAGGAAGGTTCCTCACAGCACCACCACTGTCGAGGTCGAAGTTACCCgtaaccacatatctacaattcGATTCCTTAACTgcaaatcctaaccttaacctttaagtCAGGAGGATAAAACGTATCTTTTACCCTGGATTCAACTTCATTGGCCACGGTCATAGAAATGGAGCACATTGAATATCATGCATTTTTGCGTAGGTGAAGCAAGAAAGAGATGTTGTGAGAAAACATTTAAATGCACCACCCAACTGTTGCTTTTGCTGTAGGTGACTGCCCTATGAATTATATTTATATGCCCTCGCCTCTGCTTGAATTCTCATTTCAGGACAAAGTCTTTTGGCACATCCAATCGTGCTGGACTTTTTATTTGCTAGCAGACAGATGTTGATTTAATTATCCTTTCACTACAACGTAGAGTCAACCGTGTGACTACATAAAGGACATGTAGATACAGAACACACTCCTAGATGCTATGTGTAGAAGGTAAAGCATCAGGTTCTATGGAAAGCTGTGGTGTATGGATTAGGATGGTCTGATTATCACTAGAACAGGCAAATGTGTGTGAAACTCTAGTTGAACCCATTCCTCTGCTCTTTAAGTGCTGCTTTTAATACAAGCACTGTGGACTTTCCAAACATTTCTTATTCTTAAACTCGTTTgttgaaaatatacatttttgcacattGATTTGTGAACATGCTGTTTCTATTATATCGCTGACTTTTAGTAGATTAGAGTACATAAAGGCTTGACTCAAATGTTGCGTCCAGGAATGCTTAACAGCAACATAAACCTATGCCAGATTATTCTCACAGCTGTAAAGGTGCATGCCATAGTGCTATTAACCTTGTTAAACAAAACATGTGATTGTGTCAGCACAATGGGTGAcattaaagactgttgacatgcCAACGCCATCTTAAAGATGAATGACATTCAATGAAGCCCAGTTACAAGATGTGTACATAACTTCACAATAAATCACTTCCCTACCCATAT

Function

symbol description
sgk2 Enables potassium channel regulator activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Located in nucleoplasm.

NR:

description
serine/threonine-protein kinase Sgk2-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K13303 SGK2; serum/glucocorticoid-regulated kinase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566566.2 True 2298 mRNA 0.46 13 55595569 55607324

Neighbor

gene id symbol gene type direction distance location
LOC110492334 dkga coding downstream 13347 55568377 ~ 55582222 (-)
LOC110491111 LOC106566685 coding downstream 78460 55397637 ~ 55517109 (-)
LOC110492331 LOC106566684 coding downstream 212548 55375735 ~ 55383021 (-)
actr8 actr8 coding downstream 223274 55350144 ~ 55372295 (-)
sema3b LOC106566773 coding downstream 340217 55166763 ~ 55255352 (-)
LOC110492338 LOC106566690 coding upstream 1863 55609187 ~ 55626735 (-)
LOC110492341 LOC106571981 coding upstream 19591 55626915 ~ 55632905 (-)
LOC110492339 rae1 coding upstream 26490 55633814 ~ 55638471 (-)
LOC110492342 LOC106566692 coding upstream 38821 55646145 ~ 55649415 (-)
LOC100170209 LOC100170209 coding upstream 64140 55671464 ~ 55692812 (-)
G1390777 NA non-coding downstream 14668 55580207 ~ 55580901 (-)
G1390772 NA non-coding downstream 20266 55574956 ~ 55575303 (-)
G1390771 NA non-coding downstream 20761 55574529 ~ 55574808 (-)
G1390745 NA non-coding downstream 27772 55566446 ~ 55567797 (-)
G1390744 NA non-coding downstream 29321 55564530 ~ 55566248 (-)
G1390817 NA non-coding upstream 59183 55666507 ~ 55666872 (-)
G1390818 NA non-coding upstream 59804 55667128 ~ 55667643 (-)
G1390841 LOC106613263 non-coding upstream 107918 55715242 ~ 55715658 (-)
G1390845 NA non-coding upstream 112208 55719532 ~ 55719754 (-)
G1390850 NA non-coding upstream 120191 55727515 ~ 55727835 (-)
G1390030 ifrd2 other downstream 609306 54984818 ~ 54986263 (-)
G1389763 NA other downstream 1050326 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 1862654 53730164 ~ 53757019 (-)
G1388236 NA other downstream 2562648 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 3023262 52566433 ~ 52577143 (-)
LOC110492352 nua4l other upstream 216835 55824155 ~ 55826646 (-)
G1391586 NA other upstream 457179 56064503 ~ 56064862 (-)
G1391624 NA other upstream 618090 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 673728 56240763 ~ 56293503 (-)
G1391796 LOC100286403 other upstream 816948 56424272 ~ 56437279 (-)

Expression


Co-expression Network