LOC110492352 (nua4l)


Basic Information

Item Value
gene id LOC110492352
gene name nua4l
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 55824155 ~ 55826646 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566592.2
TACGTCGGCAACACGTGACAACGGACCTCGGAGCGAGTTCGTAGCGTTAATTTATAAATTCAGTGGTTGTTAGTGGCGAGGGGCTGGTTTGGGATTCACTGCTAATCTCGGATAGTCTCAAACAATCTTTTGGGTGTCTGCATAACGGGTCCGCAAAAACGAAATACAATACATATTACTGTTGTTAAAATTAATATAATAATCTTGAAATTAATATcatataataataaaaaagttTAGAAACTGTAAGCAAATATGTTTAAAATAGCGATAGAACACGTAAAGAAGCATCCAGGGCTCATCCCCCAGTTCTTCTTCATCTTGTTGGGAATGGGAGGAGCCTCCTTGTATTTGGTCCGTCTTGCAAAGGGGCCCCATGTCACCTGGAACAAGAAGAACAACCCTGAGCCCTGGAATCAGCTTGACCCTACCTACCAGTACAAGTTTGTGGCCATCGATACTGACTACAAGAACCTGAAGAAGGAGGGACCTCAATTCTGAGTATCTTCCCTCTATCCTAACGGCACCAAGTCCAGCCCGAAGAACGTCACTGAAGAATTCAAATCTGTGAAGTATTCTTCTCTCAATGCTTCTATGCGAATATTTGGAGATTGATCCATAATGTTGATGATCAAATCTAAATGTCTGTTTGTTTTATCATAAACACTTCATTGTTAGTTTGGCAGTCACTAAATCTAACAACGAAAGTGCTCGTTATGATaacaggcaagagtgtgcatagATTTCTTCACAAAATGAAATAAATTATTAAGCTCAATTTCTGAATGGAAATGTTGTCCAAATAAAATGTCTCTAGAATTTA
>TU1588497
TGACAACGGACCTCGGAGCGAGTTCGTAGCGTTAATTTATAAATTCAGTGGTTGTTAGTGGCGAGGGGCTGGTTTGGGATTCACTGCTAATCTCGGATAGTCTCAAACAATCTTTTGGGTGTCTGCATAACGGGTCCGCAAAAACGAAATACAATACATATTACTGTTGTTAAAATTAATATAATAATCTTGAAATTAATATcatataataataaaaaagttTAGAAACTGTAAGCAAATATGTTTAAAATAGCGATAGAACACGTAAAGAAGCATCCAGGGCTCATCCCCCAGTTCTTCTTCATCTTGTTGGGAATGGGAGGAGCCTCCTTGTATTTGGTCCGTCTTGCAAAGGGGCCCCATGTCACCTGGAACAAGAAGAACAACCCTGAGCCCTGGAATCAGCTTGACCCTACCTACCAGTACAAGTTTGTGGCCATCGATACTGACTACAAGAACCTGAAGAAGGAGGGACCTCAATTCTGAGTATCTTCCCTCTATCCTAACGGCACCAAGTCCAGCCCGAAGAACGTCACTGAAGAATTCAAATCTGTGAAGTATTCTTCTCTCAATGCTTCTATGCGAATATTTGGAGATTGATCCATAATGTTGATGATCAAATCTAAATGTCTGTTTGTTTTATCATAAACACTTCATTGTTAGTTTGGCAGTCACTAAATCTAACAACGAAAGTGCTCGTTATGATaacaggcaagagtgtgcatagATTTCTTCACAAAATGAAATAAATTATTAAGCTCAATTTCTGAATGGAAATGTTGTCCAAATAAAATGTCTCTAGAA

Function

NR:

description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566592.2 False 823 mRNA 0.39 4 55824155 55826646
TU1588497 True 804 TUCP 0.39 4 55824159 55826631

Neighbor

gene id symbol gene type direction distance location
LOC110492348 viaat coding downstream 36416 55783808 ~ 55787739 (-)
LOC110492346 bpi coding downstream 55126 55755130 ~ 55769029 (-)
LOC110492344 NA coding downstream 78672 55742140 ~ 55745483 (-)
LOC100170209 LOC100170209 coding downstream 131343 55671464 ~ 55692812 (-)
LOC110492342 LOC106566692 coding downstream 174740 55646145 ~ 55649415 (-)
LOC110492353 nua4l coding upstream 18039 55844681 ~ 55847496 (-)
LOC110492354 LOC106566769 coding upstream 58737 55885383 ~ 55888359 (-)
LOC110492355 LOC106566701 coding upstream 69540 55896186 ~ 55908040 (-)
LOC110492359 LOC106566705 coding upstream 128394 55955040 ~ 55965473 (-)
LOC110492360 LOC106566706 coding upstream 159558 55986204 ~ 55998076 (-)
G1390893 NA non-coding downstream 11068 55811645 ~ 55813087 (-)
G1390888 NA non-coding downstream 19480 55798217 ~ 55804675 (-)
G1390876 NA non-coding downstream 42274 55781529 ~ 55781881 (-)
G1390877 NA non-coding downstream 42755 55781246 ~ 55781400 (-)
G1390873 NA non-coding downstream 47073 55776153 ~ 55777082 (-)
G1390914 NA non-coding upstream 21514 55848160 ~ 55848387 (-)
G1391086 LOC106566702 non-coding upstream 86991 55913637 ~ 55915767 (-)
G1391097 LOC106566704 non-coding upstream 103360 55930006 ~ 55933691 (-)
G1391102 NA non-coding upstream 116530 55943176 ~ 56001631 (-)
G1390030 ifrd2 other downstream 837892 54984818 ~ 54986263 (-)
G1389763 NA other downstream 1278912 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 2091240 53730164 ~ 53757019 (-)
G1388236 NA other downstream 2791234 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 3251848 52566433 ~ 52577143 (-)
G1391586 NA other upstream 237857 56064503 ~ 56064862 (-)
G1391624 NA other upstream 398768 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 454406 56240763 ~ 56293503 (-)
G1391796 LOC100286403 other upstream 597626 56424272 ~ 56437279 (-)
G1391869 NA other upstream 711946 56538592 ~ 56540929 (-)

Expression


Co-expression Network