LOC110492353 (nua4l)


Basic Information

Item Value
gene id LOC110492353
gene name nua4l
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 55844681 ~ 55847496 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566593.2
GTCCCAAGAGGCCAGATGTAATTGTGAGGAACAGATAGCATcttcaccttcctcctctcctctcctcaatccTGCGAGCAGCCGCCCGGACAGAGAACGCAACAGGTCTAATCTTGGATAGTCTCAAACAAGCTTTTTTGACATAGAATTCAAATTACTGTCGCTGAAATTAATTTATTCatctttaaattattattttgacAAAAAGAAGAGCAACTGTAAGAAAAGATGATTAGAACAGCAATGGAACACGTAAAGAAGCATCCAGGGCTCATCCCCCAGTTCTTCTTCATCTTGTTGGGAATGGGAGGAGCCTCCTTGTATTTGGTCCGTCTTGCAAAGGGGCCCCATGTCACCTGGAACAAGAAGAACAACCCTGAGCCCTGGAATCAGCTTGACCCTACCTACCAGTACAAGTTTGTGGCCATCGATACTGACTACAAGAACCTGAAGAAGGAGGGACCTCAATTCTGAGTATCTTCCCTCTATCCTAACGGCACCAAGTCCAGCCCGAAGAACGTCACTGAAGAATTCAAATCTGAGAAGAATTTGTCTCTCAACACTTCTAATGTATACAAATATTGGGAGATTGATCCATAATGTTGATGATCAAATCTATAAATGTGTCTGTTTGTTTTATCATAAACATTTTATTGTTAGTTTGACAGCCACTAAATTTAACAATGAATGTGCGCATTATGAAAAGAGGCAAGAGTGTGCATAGATTTGTTCACCAAAttacagtgaacaaaaatataaaaatgcaacatgcaacaatttcaaaaatgttactgagttacagatcatataaggaaatcagcaaTTTGAAACAAACTAACCTGGCCTTTTGGATTCTAgcttgaaatatacttattcatgttaCCATACCAGAACTTAGTGATTACTTTACATGatgggttgggaaggttactttctaaatgtaatccgttacagttactagttacctgtccaaaattgtactcagtaacataacttttggattactattagattactttccccttaagaggcattagaagaagacaaacgtatgttaccaattgaactacatctattgcaggataaatccatgttgaagtttacatagctggccatatatggatgttaaattttactttatgggttggttatgtaggcttcttctaacccatcgcctTCTACTACATATGATAATacaattaaattatatctttacatttaaaaccaaagtctatcagaattccagtcattctaataaatgttataccccttgaacTTCAGGagtaggacttggaaatatggaagaaTAGATTAGCTAAATAGTTTTACCTGAGTGTAACCCCAAAAccaaggacttattagccagccctacactgttgtttatgattttgttgtcatggaggactgattgggctcattaaTAAATGCTGCTCTCATAGAATGACATGCTTTGAG
>TU1588498
ctcctcaatccTGCGAGCAGCCGCCCGGACAGAGAACGCAACAGGTCTAATCTTGGATAGTCTCAAACAAGCTTTTTTGACATAGAATTCAAATTACTGTCGCTGAAATTAATTTATTCatctttaaattattattttgacAAAAAGAAGAGCAACTGTAAGAAAAGATGATTAGAACAGCAATGGAACACGTAAAGAAGCATCCAGGGCTCATCCCCCAGTTCTTCTTCATCTTGTTGGGAATGGGAGGAGCCTCCTTGTATTTGGTCCGTCTTGCAAAGGGGCCCCATGTCACCTGGAACAAGAAGAACAACCCTGAGCCCTGGAATCAGCTTGACCCTACCTACCAGTACAAGTTTGTGGCCATCGATACTGACTACAAGAACCTGAAGAAGGAGGGACCTCAATTCTGAGTATCTTCCCTCTATCCTAACGGCACCAAGTCCAGCCCGAAGAACGTCACTGAAGAATTCAAATCTGAGAAGAATTTGTCTCTCAACACTTCTAATGTATACAAATATTGGGAGATTGATCCATAATGTTGATGATCAAATCTATAAATGTGTCTGTTTGTTTTATCATAAACATTTTATTGTTAGTTTGACAGCCACTAAATTTAACAATGAATGTGCGCATTATGAAAAGAGGCAAGAGTGTGCATAGATTTGTTCACCAAAttacagtgaacaaaaatataaaaatgcaacatgcaacaatttcaaaaatgttactgagttacagatcatataaggaaatcagcaaTTTGAAACAAACTAACCTGGCCTTTTGGATTCTAgcttgaaatatacttattcatgttaCCATACCAGAACTTAGTGATTACTTTACATGatgggttgggaaggttactttctaaatgtaatccgttacagttactagttacctgtccaaaattgtactcagtaacataacttttggattactattagattactttccccttaagaggcattagaagaagacaaacgtatgttaccaattgaactacatctattgcaggataaatccatgttgaagtttacatagctggccatatatggatgttaaattttactttatgggttggttatgtaggcttcttctaacccatcgcctTCTACTACATATGATAATacaattaaattatatctttacatttaaaaccaaagtctatcagaattccagtcattctaataaatgttataccccttgaacTTCAGGagtaggacttggaaatatggaagaaTAGATTAGCTAAATAGTTTTACCTGAGTGTAACCCCAAAAccaaggacttattagccagccctacactgttgtttatgattttgttgtcatggaggactgattgggctcattaaTAAATGCTGCTCTCATAGAATGACATGCTTTGAGCACC

Function

NR:

description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566593.2 False 1455 mRNA 0.37 4 55844685 55847496
TU1588498 True 1398 lncRNA 0.37 4 55844681 55847435

Neighbor

gene id symbol gene type direction distance location
LOC110492352 nua4l coding downstream 18039 55824155 ~ 55826646 (-)
LOC110492348 viaat coding downstream 56946 55783808 ~ 55787739 (-)
LOC110492346 bpi coding downstream 75656 55755130 ~ 55769029 (-)
LOC110492344 NA coding downstream 99202 55742140 ~ 55745483 (-)
LOC100170209 LOC100170209 coding downstream 151873 55671464 ~ 55692812 (-)
LOC110492354 LOC106566769 coding upstream 37887 55885383 ~ 55888359 (-)
LOC110492355 LOC106566701 coding upstream 48690 55896186 ~ 55908040 (-)
LOC110492359 LOC106566705 coding upstream 107544 55955040 ~ 55965473 (-)
LOC110492360 LOC106566706 coding upstream 138708 55986204 ~ 55998076 (-)
LOC110491116 LOC106566709 coding upstream 161692 56009188 ~ 56036787 (-)
G1390893 NA non-coding downstream 31598 55811645 ~ 55813087 (-)
G1390888 NA non-coding downstream 40010 55798217 ~ 55804675 (-)
G1390876 NA non-coding downstream 62804 55781529 ~ 55781881 (-)
G1390877 NA non-coding downstream 63285 55781246 ~ 55781400 (-)
G1390873 NA non-coding downstream 67603 55776153 ~ 55777082 (-)
G1390914 NA non-coding upstream 664 55848160 ~ 55848387 (-)
G1391086 LOC106566702 non-coding upstream 66141 55913637 ~ 55915767 (-)
G1391097 LOC106566704 non-coding upstream 82510 55930006 ~ 55933691 (-)
G1391102 NA non-coding upstream 95680 55943176 ~ 56001631 (-)
G1390030 ifrd2 other downstream 858422 54984818 ~ 54986263 (-)
G1389763 NA other downstream 1299442 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 2111770 53730164 ~ 53757019 (-)
G1388236 NA other downstream 2811764 53031932 ~ 53032921 (-)
G1391586 NA other upstream 217007 56064503 ~ 56064862 (-)
G1391624 NA other upstream 377918 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 433556 56240763 ~ 56293503 (-)
G1391796 LOC100286403 other upstream 576776 56424272 ~ 56437279 (-)
G1391869 NA other upstream 691096 56538592 ~ 56540929 (-)

Expression


Co-expression Network