LOC110492354 (LOC106566769)


Basic Information

Item Value
gene id LOC110492354
gene name LOC106566769
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 55885383 ~ 55888359 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947334.1
TATTGAAGCCACTAACAAAATGTGATTTGACTTTCTTGTTAGTCTAAAGGGTTCTACGTTTTCTTCCAAGTGGATTGCTGTCAGACTTTGATTGATTGCCCCGGTGTCCAGATTTGTACGTCAACATAAGACATTCAGAGAAGAAATGAGGGTACTATTAATCAACTTTGCCACCTTCAGTCTGTGTCTTCTACCAACGGTGCCGTCCATATGTCTGTGGCGTGGCCCAATTGCTTTTGGTTCTTATTTGAGAAGAGGAGTGCAAAAGGAGGATGCTGTGAAGACCTTGGACTATCTGAACCTTAGCCCATTTGACTCCCTCTCACAGCCCTCTCCCTATGACATAAGAAGGTTAGGGGTAGATGGAAACATTGGCGCTGCAATGAAAGTCAAACACCTTTCCAAAGACTTCCAGATCGTATCCACCAAGACTAAGCCCCCAAACTATAGCTCTGTGGGCCCACATGGCTGGTCACAGAACCTCTCCCTACCCCTGGATCAGTCACAGTTACACTCCAAACCCAAGCCCCCCATGAAAGCACCTATCAAAGCTAAGAAGACCTTTGGCTGGGGAAACTTCTACCTCAACATCAAAACCACCAAGTTCAGCCTGCTGGTGACAACTAAGATAGTGGACCACATCAACGGCACCTTCAGTGTGTACTTCCATCACAATTCGTCCCATCTGGGGAATATCTCAATGAGCATTGTTCCTCCCTCCAAACCCGTGGAATGGGATAATGTGGGAAGCCCGGAGCTCCAGTTCCAgaatcagccacagtctaccatcaaTGAGCACCTGCAAGAGATGAAGGCCCTCAACTGCAGGGTGGAGTACCAGAGGACCAACAGGGCCAAGAAGACCAAACCCTGCCTCTATGACCCCTCCCAGACCTGCTACTCAGAACACACGCAGTCTCACGCCGCCTGGATCTGTGCCAAGCCCTTCAAGGTCTTCTGTGTATTCATCTCTTTTCTCAGCACCGACTACAAACTGGTGCAGAAGGTCTGTCCAGACTACAACTTCTAGGCAGATCTCCAGCAATTTGGTGGACGAGGATAGTCGATAAACTAGAAAGGTTGATAAGGCATGTTTTTCTACATCTCCTATCCCAGTGGAGAAAGGGGCTTGCGCTGAACGGCAAGGATGGATGGTCCCACACCAACATTCAGGCCTCACACAGACATTCAGATGGAGAGCTTTGTGTTTAGCAGAATGGAAGTCAGCAGCAtatggacaataacctaaaaaaaaaatattcaccaCTGAAGGGTAGAAGACAGAAGATCAAGTAGGATAATAGTAAGATTATTTTGTGAACTATTTGTGGTAAAATATTGACTTGGGGGAGTGATGCCCTATGTGCATGCCAATTCCAGCACATCTCTAATCCCTGCTTTTATTACTTGTGGTTATGTTTGGGGAAGTGTTCTGCTTATTTGTCACACGGTGCCCCTTTGTTAGTTTGGGGTTATCCTAACGCAACTAAGGCAAGGTACCTGGATGTTGATTATTGAGTTTGGTCATACTGTATGATTCACATACGGAAtctacatttgatttaattttacAAGCAGATATGAAATGATGTATGATGGAAAGCAAAATGTAGATTTGAAATGCATATTAAAATGAGTAGGTTTTTGCTTGATGTGTTATTGAGTTCATA

Function

NR:

description
neurexophilin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947334.1 True 1670 mRNA 0.45 3 55885383 55888359

Neighbor

gene id symbol gene type direction distance location
LOC110492353 nua4l coding downstream 37887 55844681 ~ 55847496 (-)
LOC110492352 nua4l coding downstream 58737 55824155 ~ 55826646 (-)
LOC110492348 viaat coding downstream 97644 55783808 ~ 55787739 (-)
LOC110492346 bpi coding downstream 116354 55755130 ~ 55769029 (-)
LOC110492344 NA coding downstream 139900 55742140 ~ 55745483 (-)
LOC110492355 LOC106566701 coding upstream 7827 55896186 ~ 55908040 (-)
LOC110492359 LOC106566705 coding upstream 66681 55955040 ~ 55965473 (-)
LOC110492360 LOC106566706 coding upstream 97845 55986204 ~ 55998076 (-)
LOC110491116 LOC106566709 coding upstream 120829 56009188 ~ 56036787 (-)
LOC110492365 spry4 coding upstream 187844 56076203 ~ 56078237 (-)
G1390914 NA non-coding downstream 36996 55848160 ~ 55848387 (-)
G1390893 NA non-coding downstream 72296 55811645 ~ 55813087 (-)
G1390888 NA non-coding downstream 80708 55798217 ~ 55804675 (-)
G1390876 NA non-coding downstream 103502 55781529 ~ 55781881 (-)
G1391086 LOC106566702 non-coding upstream 25278 55913637 ~ 55915767 (-)
G1391097 LOC106566704 non-coding upstream 41647 55930006 ~ 55933691 (-)
G1391102 NA non-coding upstream 54817 55943176 ~ 56001631 (-)
G1391127 NA non-coding upstream 118315 56006674 ~ 56008753 (-)
G1390030 ifrd2 other downstream 899120 54984818 ~ 54986263 (-)
G1389763 NA other downstream 1340140 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 2152468 53730164 ~ 53757019 (-)
G1388236 NA other downstream 2852462 53031932 ~ 53032921 (-)
G1391586 NA other upstream 176144 56064503 ~ 56064862 (-)
G1391624 NA other upstream 337055 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 392693 56240763 ~ 56293503 (-)
G1391796 LOC100286403 other upstream 535913 56424272 ~ 56437279 (-)
G1391869 NA other upstream 650233 56538592 ~ 56540929 (-)

Expression


Co-expression Network