LOC110491119 (LOC106566720)


Basic Information

Item Value
gene id LOC110491119
gene name LOC106566720
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56352467 ~ 56359968 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947350.1
CAATACCGCTGGCAGCAAGCTTCATCGCAGGAGGAGAGAATCACGGCACAAAGCACTGATAACTGACAGAGGatttacaaaggagttgttttgTTTCACATATACATTTATTGTATTCATCAACCAAATCTTTTTCACAATGAAGGAAAGGAGACTTACCCAGCCTATGGTGGCGAGATGTAAACTGGTGTTGGTTGGGGATGTTCAATGCGGGAAAACCGCAATGTTGCAAGTCCTGGCCAAGGATTCCTATCCTGAGACATATGTTCCAACAGTATTTGAGAACTACACAGCCTGTCTGGAGCTGGAGGACCAGCGCGTAGAGCTCAGTCTCTGGGACACGTCAGGCTCCCCGTACTATGATAACGTCCGACCCCTGTGCTACAGCGACTCAGACGCTGTGCTCCTCTGTTACGACATCAGCCGACCAGACTCAATTGATGGTGCACTGAAAAAGTGGAAGACAGAGATCCTGGATTTCTGCCCCAGCACACGCATCCTCCTGATAGGCTGTAAAACAGACCTGCGCACAGACGTGTGTACGCTCATGGAGCTGTCCAATCAGAAGCAGACACCCATCTCACATGAGCAGGGTTcctccatggccaagcagctagGTGCGGAGGCCTACTTGGAGTGTTCGGCCTTCACCTCAGAGAAGAGCATCCACAGTGTGTTCCGTACTTCAGCCCTGGCCTGCATCAGCAAGCTACAGCCCTCCACCAAGACCAGCCCTGCCCGACGCCTCTCCAAGAGACTCCTTTTCCTGCCCAGAAAGtctgacctcctctcctccaccttcgGCAAGGACAAGGCTAAGGGCTGCTCCATCATGTGAGGGAGGGGGAAGAACCCAGACTGGGGTGGCCAGCGATTCACTCCATTGAACAGTCCAgcgggcaaaagggggtgcaaggTGGTAGAGGGGCAAGGGAATCGGAAGTAAGGGGGAAGGAAGGTTTTTTTTTAGAACCCCTCTGGCCTCCCCCAACATCCTCCCCAGTCCCCACCCCCACTGACGCCCCACTTAAAAAAAACATGGTTTACTCTGTATAGGATATACTGGTCCTCTTCATGATCACCCccccacaaacaaacaaacaaacaaacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

NR:

description
rho-related GTP-binding protein Rho6-like

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0016020 membrane cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07531 RND1; Rho family GTPase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947350.1 True 1187 mRNA 0.52 5 56352467 56359968

Neighbor

gene id symbol gene type direction distance location
LOC110491118 LOC106571944 coding downstream 13927 56322691 ~ 56338540 (-)
LOC110492371 adcy6 coding downstream 58964 56240763 ~ 56293503 (-)
LOC110492367 LOC106566716 coding downstream 115562 56231265 ~ 56236905 (-)
LOC110492369 g6pd coding downstream 130889 56206812 ~ 56221578 (-)
LOC110492365 spry4 coding downstream 274230 56076203 ~ 56078237 (-)
LOC110492378 LOC106566727 coding upstream 183674 56543642 ~ 56563898 (-)
LOC110492379 LOC106566728 coding upstream 210157 56570125 ~ 56679900 (-)
LOC110492380 LOC106566729 coding upstream 353814 56713782 ~ 56729174 (-)
col9a3 LOC106566732 coding upstream 470792 56830760 ~ 56854519 (-)
LOC110491121 ogfr coding upstream 497103 56857071 ~ 56875920 (-)
G1391721 NA non-coding downstream 480 56350987 ~ 56351987 (-)
G1391755 NA non-coding downstream 2703 56349540 ~ 56349764 (-)
G1391746 NA non-coding downstream 18993 56333155 ~ 56333474 (-)
G1391693 NA non-coding downstream 111797 56240316 ~ 56240670 (-)
G1391796 LOC100286403 non-coding upstream 73163 56424272 ~ 56437279 (-)
G1391799 NA non-coding upstream 96176 56456144 ~ 56456559 (-)
G1391826 NA non-coding upstream 99173 56459141 ~ 56459352 (-)
G1391802 NA non-coding upstream 111763 56471731 ~ 56473616 (-)
G1391839 baz2a non-coding upstream 128704 56488672 ~ 56489237 (-)
G1391624 NA other downstream 126406 56225414 ~ 56226061 (-)
G1391586 NA other downstream 287605 56064503 ~ 56064862 (-)
LOC110492352 nua4l other downstream 525836 55824155 ~ 55826646 (-)
G1390030 ifrd2 other downstream 1366204 54984818 ~ 54986263 (-)
G1391869 NA other upstream 178624 56538592 ~ 56540929 (-)
LOC110492394 psma7 other upstream 1489706 57849674 ~ 57853907 (-)
LOC110492397 NA other upstream 1527523 57887491 ~ 57893319 (-)
G1393949 LOC105029132 other upstream 1844791 58204759 ~ 58207165 (-)

Expression


Co-expression Network