LOC118939608


Basic Information

Item Value
gene id LOC118939608
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56436596 ~ 56436669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036641.1
TCTTCAATGATGATTGATACAGTGACTTTCGTTCTTCTGAGTCTACTGAAGCCAACCTTTCTGTCCTGAGAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036641.1 True 74 mRNA 0.41 1 56436596 56436669

Neighbor

gene id symbol gene type direction distance location
LOC118939611 NA coding upstream 943 56435583 ~ 56435653 (+)
prim1 prim1 coding upstream 24203 56400050 ~ 56412393 (+)
LOC110491117 NA coding upstream 114098 56310609 ~ 56322498 (+)
LOC118939557 NA coding upstream 196823 56237795 ~ 56239773 (+)
LOC110492370 LOC106566713 coding upstream 230295 56189995 ~ 56206301 (+)
LOC118939609 NA coding downstream 358 56437027 ~ 56437100 (+)
LOC110492374 ptges3 coding downstream 14246 56450915 ~ 56457720 (+)
LOC110492376 baz2a coding downstream 25836 56462505 ~ 56471950 (+)
LOC110492375 baz2a coding downstream 37741 56474410 ~ 56507995 (+)
LOC118939476 NA coding downstream 88250 56524919 ~ 56526061 (+)
G1391370 NA non-coding upstream 12863 56423421 ~ 56423733 (+)
G1391327 NA non-coding upstream 74535 56360627 ~ 56362061 (+)
G1391318 NA non-coding upstream 84164 56350996 ~ 56352432 (+)
G1391307 NA non-coding upstream 106520 56329859 ~ 56330076 (+)
G1391303 NA non-coding upstream 112936 56323445 ~ 56323660 (+)
G1391363 NA non-coding downstream 21234 56457903 ~ 56459321 (+)
G1391364 NA non-coding downstream 28428 56465097 ~ 56465424 (+)
G1391358 NA non-coding downstream 35626 56472295 ~ 56473635 (+)
G1391382 NA non-coding downstream 54838 56491507 ~ 56491947 (+)
G1391383 NA non-coding downstream 57661 56494330 ~ 56495617 (+)
G1391254 NA other upstream 189723 56246515 ~ 56247620 (+)
G1390616 LOC106566696 other upstream 613404 55793024 ~ 55823192 (+)
G1390527 NA other upstream 796297 55640022 ~ 55640299 (+)
G1390508 NA other upstream 803758 55628694 ~ 55632838 (+)
G1390473 NA other upstream 906948 55528593 ~ 55529648 (+)
LOC118939462 LOC106566730 other downstream 343392 56779988 ~ 56790929 (+)
G1392601 NA other downstream 929282 57365951 ~ 57366517 (+)
G1392616 NA other downstream 960271 57396940 ~ 57397177 (+)
G1392617 NA other downstream 964816 57401485 ~ 57402530 (+)
G1393570 LOC106566761 other downstream 1982717 58419386 ~ 58423502 (+)

Expression


Co-expression Network