LOC110491121 (ogfr)


Basic Information

Item Value
gene id LOC110491121
gene name ogfr
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56857071 ~ 56875920 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564477.2
atgatcacaaACATTTTAATCGAGTCATTTCATAAAGAATGGAGGACTGACTATAAGAGGCTGGAGAGAGTTCACTCCTACATTCAGTGGTTGTTTCCACTGCGGGAGCCTGGAGTGAACTACATGGCCTCTGAGCTCACCAAGAAGGAGATCCTGGCCTTCCGGGAGAGTGAGGGGGCCAAGAAGAGGCTGGTAGAGTCCTACGAGCTCATGTTGCGGTTCTATGGCATCCAGCTGGTCAATAAAGACACAGGCGAGGTCAAACGTGCCGACAACTGGAAGGAACGCTTCGCCAACCTTGAAAGGAACATGCACAATAACCCCTGCATCACGCGCATCCTGAAGGGCCTGGGGGAGCTAGGTTTTGAGCATTACCAGAGCCCACTGGTGCACTTTTTCCTGGAGGAGATGCTGGTCAAAAAGAACCTGAGTAGCATCAAGCGCAACGTGTTTGACTACTTCCTGTTTGCAGTGCGTGACAAGCAGAAGCGCAAAGAGTTGCTGCGCTACGCCTTCCAGCACTTCGAGCCCAAGGACAAGTTTGTGTGGTGCCCCCGAAAGATCCAGAAACAGCTGAAGAAGGCAGAGAAGGGAAacggagagggagtagaggagggctTCCCACGAGCCAAggctagaggaggagaggcagggggagccCAGAAGGAAGCGAAGGATGTCACAGAGGAGGTGACAGAGACGGCCAAATTGACTGATGAAGCAGTGAGTAGTGACCGAGATAAGCAGGCCGAGGGGTCTTCTGTTGATCCTCCTGGGCTAGCGGTCTCCTCAGAGGACTCTGAACCGCTGGGAAACAGGAACTGTAATGATACTGACAATGTTGACATGGACCATTCAGGCAGCCCTGAGTCTGTTAAAGGAGACCACAGTATGGAGGAAGGACTCAAAGAGAACAGTCAAGCCAAGGACAGCGTCCAGAACTCAGTCAATGTCAAGCCAGCTGCATCTGAAATGGAGTCTGAGAAGTTGGAGCAACCGACCAAGAAGAAAAGGGAAGGTCACAAGGCGTGCCTAGCAACAGGCGGGAGGAAGGCATGGTTGTCcccaacaacaaccaccaccactccAATCAGGTGAGCCTGTCCGTGACATCATCCCACAAAGTCAAGACTGATGATCCCAAAAAGGATTCGCCCAAGAAGAATTTGACCATAAAGGATTCCCCCAAAAAGCACTTGCCATCGGACTCCTCAGAACGAGGTGAAAAACACCCAAGGACTGACTTTAGTGATGTGACTGATAACAAAGCAGTGCCAGTGGATGGGGACAACACAGAGAAAGCTTTAAAGGGACAGACAAATGTAAAAGAAGTGAAAAATGGAGTGGAGGTGATGGATGTGGAATCCACCTACCAGCCAAGACATGGGATCTtcctgaaggaaggaaggaaggaa

Function

symbol description
ogfr Predicted to enable G protein-coupled opioid receptor activity. Predicted to be located in membrane. Orthologous to human OGFR (opioid growth factor receptor).

NR:

description
opioid growth factor receptor-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564477.2 True 1415 mRNA 0.51 5 56857071 56875920

Neighbor

gene id symbol gene type direction distance location
col9a3 LOC106566732 coding downstream 2552 56830760 ~ 56854519 (-)
LOC110492380 LOC106566729 coding downstream 127897 56713782 ~ 56729174 (-)
LOC110492379 LOC106566728 coding downstream 177171 56570125 ~ 56679900 (-)
LOC110492378 LOC106566727 coding downstream 293173 56543642 ~ 56563898 (-)
LOC110491119 LOC106566720 coding downstream 497103 56352467 ~ 56359968 (-)
LOC118939559 NA coding upstream 378 56876298 ~ 56877789 (-)
LOC110492388 LOC106566734 coding upstream 39739 56915659 ~ 56937661 (-)
LOC110492390 taf4 coding upstream 957529 57833449 ~ 57845200 (-)
LOC110492394 psma7 coding upstream 974484 57849674 ~ 57853907 (-)
LOC110492397 NA coding upstream 1011789 57887491 ~ 57893319 (-)
G1392017 NA non-coding downstream 31493 56825302 ~ 56825578 (-)
G1391985 NA non-coding downstream 82271 56774484 ~ 56774800 (-)
G1391983 NA non-coding downstream 83195 56773669 ~ 56773876 (-)
G1391980 NA non-coding downstream 87921 56768907 ~ 56769150 (-)
G1391930 NA non-coding downstream 144909 56709432 ~ 56712162 (-)
G1392059 NA non-coding upstream 3149 56879069 ~ 56879276 (-)
G1392062 NA non-coding upstream 3759 56879679 ~ 56879886 (-)
G1392064 NA non-coding upstream 5165 56881085 ~ 56881533 (-)
G1392065 NA non-coding upstream 6135 56882055 ~ 56882267 (-)
G1392068 NA non-coding upstream 6390 56882310 ~ 56882638 (-)
G1391869 NA other downstream 316142 56538592 ~ 56540929 (-)
G1391796 LOC100286403 other downstream 419792 56424272 ~ 56437279 (-)
LOC110492371 adcy6 other downstream 563599 56240763 ~ 56293503 (-)
G1391624 NA other downstream 631010 56225414 ~ 56226061 (-)
G1391586 NA other downstream 792209 56064503 ~ 56064862 (-)
G1393949 LOC105029132 other upstream 1328839 58204759 ~ 58207165 (-)
G1393997 LOC106566752 other upstream 1398108 58274028 ~ 58278427 (-)
LOC110492410 LOC106566756 other upstream 1426591 58302511 ~ 58315644 (-)

Expression


Co-expression Network