LOC118939559


Basic Information

Item Value
gene id LOC118939559
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56876298 ~ 56877789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036560.1
ttgagattatCCCCCAGTCTCTCAGTGGTGACCACCAACCACGGCGCCATGCAGAAATTTAACAGGTAGACAGTGGAATGTGTAGAATGCACAAACTCTGCTGCTGTTTGGAGCTGGTTCAGGTTGCCCCTACACTGTCATCCTTCTCTGCAACTGGCCAAACAGGGAAACTATGGGATGATTATTGTCTCCTCTTCGGTTCCATTGACTTGACACCCAGTGGTCAAACACGTCCTCCAGAAACATGAGGGCTGCGAAGGACATGCAGAACTACAGACGAGGGTATCCTAATCTAACAGATGAATGCTCAGGAGAAAGAATGTTTAATTTAAAATTCTATCTCAATGAATATCCCGCCTCCCCTGATGGTAGGTCACTTGCTATTTAATCAGTTTTCAATGGCTATAAAATGTGCGTAATGAGTAAAAGCATAtacaatgccttgcaaaagtattcataccccttggattttgtaagcatttcacattttaagtaagcatttcactgtcatgtctacatctgttgtattcagctcatgggactaataacatttgattttcttTGGAGACGAGGGTATAACCAGCCATATGGAAGCAAACTGAAACTCATATTATATATTGAGGCCCCTTTTTCCACAATGAAATGTGCCGCTATTCTGAATTTAATTGTGTGCCCTCATAATTTGCGTGGATGATATTCAGAGACTCAAGTTATAGGCTTCTGAAGGGCTGAACATGCTGGGTTGATGTATGACCTTTTAGAATGTTTTGATaatatgtttgtgcttttctgtttttattttacaatttgtatCATGTTAAATGTTAGCCACTATTGGGAGCCACAGTCAGTAATaccacatacattttatttttgcatCATTCCATTCTGTTTACgtttctttcctctgtcacatCCTTGTAAATTGTTCCTGATGGTCACTAGCATTAGTGGATCATATTAGGCTAACAGTGTACAATCAtttgggacatgtagcctatttgaatcattatAGAACTCTTACCACACATAGCAGGTTTAACCAGTAGCCTGGCGCACGGTTCAGGATGCCTGGACCGTTGTCATCCTGTTCCATGATTgatccctatattctgaacctgtaCTCTTGATGTATTccattgagtctgttgacaaaattcAAATTAAAGTTACACCATATTTTAAA

Function

NR:

description
opioid growth factor receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036560.1 True 1186 mRNA 0.40 3 56876298 56877789

Neighbor

gene id symbol gene type direction distance location
LOC110491121 ogfr coding downstream 378 56857071 ~ 56875920 (-)
col9a3 LOC106566732 coding downstream 21779 56830760 ~ 56854519 (-)
LOC110492380 LOC106566729 coding downstream 147124 56713782 ~ 56729174 (-)
LOC110492379 LOC106566728 coding downstream 196398 56570125 ~ 56679900 (-)
LOC110492378 LOC106566727 coding downstream 312400 56543642 ~ 56563898 (-)
LOC110492388 LOC106566734 coding upstream 37870 56915659 ~ 56937661 (-)
LOC110492390 taf4 coding upstream 955660 57833449 ~ 57845200 (-)
LOC110492394 psma7 coding upstream 972615 57849674 ~ 57853907 (-)
LOC110492397 NA coding upstream 1009920 57887491 ~ 57893319 (-)
LOC110492399 cdh26 coding upstream 1020682 57898471 ~ 57921688 (-)
G1392052 NA non-coding downstream 2065 56874004 ~ 56874233 (-)
G1392050 NA non-coding downstream 4638 56871457 ~ 56871660 (-)
G1392049 NA non-coding downstream 4997 56871098 ~ 56871301 (-)
G1392043 NA non-coding downstream 6956 56868998 ~ 56869342 (-)
G1392017 NA non-coding downstream 50720 56825302 ~ 56825578 (-)
G1392059 NA non-coding upstream 1280 56879069 ~ 56879276 (-)
G1392062 NA non-coding upstream 1890 56879679 ~ 56879886 (-)
G1392064 NA non-coding upstream 3296 56881085 ~ 56881533 (-)
G1392065 NA non-coding upstream 4266 56882055 ~ 56882267 (-)
G1392068 NA non-coding upstream 4521 56882310 ~ 56882638 (-)
G1391869 NA other downstream 335369 56538592 ~ 56540929 (-)
G1391796 LOC100286403 other downstream 439019 56424272 ~ 56437279 (-)
LOC110492371 adcy6 other downstream 582826 56240763 ~ 56293503 (-)
G1391624 NA other downstream 650237 56225414 ~ 56226061 (-)
G1391586 NA other downstream 811436 56064503 ~ 56064862 (-)
G1393949 LOC105029132 other upstream 1326970 58204759 ~ 58207165 (-)
G1393997 LOC106566752 other upstream 1396239 58274028 ~ 58278427 (-)
LOC110492410 LOC106566756 other upstream 1424722 58302511 ~ 58315644 (-)

Expression


Co-expression Network