LOC110491122 (LOC106566746)


Basic Information

Item Value
gene id LOC110491122
gene name LOC106566746
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 58105100 ~ 58162080 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947379.1
CAAAGCACCTCCTCAAAGTCGGATCGCTGAGCTCGGCTCGTCGCACTCGCTGCAACACGTCTTGTCAACCTTGCAGTTTACGCGTGGCCCAGGGAGACAGTGACAGGCTAGTGAAAGAGGTCGGAGTATCTGGATGTAAAGGCAAAATAATCGAAATTCAAAATTGTACAGATCAGTGGATTTTAAGGCAATCCAATAACAGTGGACGTTGAAGTGAAATGTATGTTCCAATCGGGAACTCTTCCCTCAACATGAGGGGCCGTGAATGATTCAGGCATTGAACAAAACATGTTGCGAAGTTCAATATCCTTATTTTAAGAATTGGGTTAGAGCACTCAGCGCAATTACGCACGGCATCAAAATGGTTTCATTTTTGGATAGACGTGCCCCTGCTTTGTTCCTCGTATGGGGCTACTGCGTCCTGGCGGACACAGTATTTTCTAACTTTACCCTGGACAATGAGGTCCACTCGAGTTTCATCCACCGGCGGCTGAAAAGCCAGGAGCGCAGGGAGATGCAGCGGGAAATCCTTTCGATACTCGGGCTCCCACATCGGCCGCGACCGCATCTCCACGGGAAGCACAACGCGGCCCCAATGTTCATGATGGACCTGTACAATGCCATGTCCACGGAGGGGGAAGAGGACGCGTACTCCTATCCATACAAACCCGTCTTCACCACCCAGGGGCCGCCGATAGCAACTCTACAGGACAACAACTTGCTAAACGACGCAGACATGGTTATGAGCTTTGTGAATTTAGTGGAGCACGATAAGGAGTTTCTCTCGGTCCGGCGGCACCACAGAGAGTTTCGTTTCGACCTATCACGTATCCCCGATGGGGAAGCGGTCACCGCTGCAGAGTTACGCATCTATAAGGACTTCATCCACGAGCGCTTTGAGAATGAGACCTTCCGCATCAGTGTCTACCAGGTGCTGAAGGAACACAACGACAGGAAGTCGGACCTGTTTCTGTTGGACTCGCGGGTCATCTGGGCGGCTGAGGAGGGGTGGCTGGTGATTGATGTGACATTGACCAGTAACCACTGGGTTCTGAATCCTGGACACAACCTGGGACTGCAGCTGGCTCTGGAGAGCACTGCCGGTGAGAGTGTGAACCCGCGGATGGCAGGGCTGATCGGCCTCAGTGGTCCCCAGAATAAACAGCCCTTCATGGTGGCCTTCTTCAAAGCCACAGAGGTGCACCTGCGCAGCATCCGCTCAGCACCAGGGGGCACCAAACAACGCAACCCCAACCGCTCCAAAGGGGCCAACAAGGGCCAGGAGGCACTCCGAGTGACCAATATCGCAGaGAACAGCAGTGCTGATCAGAAGCAGGCATGCAAGAAACACGAGCTCTATGTCAGTTTCAGAGacctggggtggcaggactggATCATAGCTCCAGAGGGCTATGCAGCTTATTACTGTGAGGGAGAGTGTGCCTTCCCTCTCAACTCCTACATGAATGCCACTAACCACGCCATCGTGCAGACACTAGTCCACCTAATAAACCCAGACACCATTCCTAAGCCCTGCTGTGCTCCCACCCAGCTCCATGCCATCTCAGTGCTCTACTTTGACGACAGTTCCAATGTCATCCTCAAGAAGTACCGCAACATGGTGGTCAGAGCCTGTGGCTGCCATTAGACTACAGCCAACCTCGAaccctcacaacacacacacacacacattcctgccTCTAAATATCCCTCAACGCACGTGACTTTCATCTAGAGACTTGAATGGACACATGAATAAACTACATGTCTTAGAGTGCCTTGCCGTGCTGCTGGATAGGAGCTACATGAGGACTGGCAGACAATCATGATTATTGAGTCCAacttggaacacacacactctctgtgctTTCTACTGTGTATGAGACATTTTAAGCAGTGATTGTATAGTAATACACAGTCAACAATATTTTGTTAATGTCAATATGTTTTCTGTGTAGTTAAATGTGTTTTTCTAGATATTTTTGATCTATATTGTTTTTGTATGCTTTTTATGACTGAAAGACCAGGCTTTAGGAAGTGTGGATGCTCTATGGACTCTTCATGTACATTACTGTGTAAATAGTTTTTCAAACAAAGAGAAGCGTATTTATTTCCTGGTCTTGGGAATGTTAAGGGTAGGTTCAATGTTTATCCTCTGTACTCCAGTgtctacatgtactgtatgttatgcaACTCTTTACATTGCGTCCCACTCATCATACAGTATAGTACAAACacacctctctctttgtctctttctttctctctctctcttttttttctatctctcttgttctctccctctctgtttctcaccaTGCTTGCTCAGTTGTTTGTCCTGCACAGTACAGTGTTAAATCTATCATCAGTACGGACCTATCATTACACTCTTGTCATGGGAAACAACTCTGCCCTTTCCTCTCCATATCCCAAACATTGTCTTAATGTTACTCTGATGTCATACGCACACTAGTGTATTGACTCAGATATAGAAAGAAAATGGATAGTTCTCTTCAGAAAAAAGGACAACATTTGCATTAATATAGCTCTGTTTATAAGCTAGGGTTAAAAAAGTGTCACACAAGTCATTGAGAAACAATAATACAGAGGGTTTCAGGAAAACAGACGTAAGAGAAAGAAGGGGGATTGAGAGAAATAGATATGTGTATCTGTGTGCCAGGTCATTTTAGGATGAACTGTTTTTCTATCCTCTGCCGTAAAGTCTACCTTATTTAAGAGGACAATTTATTGAGAGCCGAGAAGGCTGGTATTCTCTGCCAACGCAGCATCTTATTAACTCACAAAAGTCTTTGTTTTACTGCAAAACTGGTTCAATAAAATGGGAGGAAGCATCA
>TU1591756
CAACACGTCTTGTCAACCTTGCAGTTTACGCGTGGCCCAGGGAGACAGTGACAGGCTAGTGAAAGAGGTCGGAGTATCTGGATGTAAAGGCAAAATAATCGAAATTCAAAATTGTACAGATCAGTGGATTTTAAGGCAATCCAATAACAGTGGACGTTGAAGTGAAATGTATGTTCCAATCGGGAACTCTTCCCTCAACATGAGGGGCCGTGAATGATTCAGGCATTGAACAAAACATGTTGCGAAGTTCAATATCCTTATTTTAAGAATTGGGTTAGAGCACTCAGCGCAATTACGCACGGCATCAAAATGGTTTCATTTTTGGATAGACGT

Function

NR:

description
bone morphogenetic protein 7-like

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947379.1 False 2855 mRNA 0.47 7 58105100 58162080
TU1591756 True 333 lncRNA 0.42 1 58161696 58162028

Neighbor

gene id symbol gene type direction distance location
LOC110492403 LOC106566745 coding downstream 7364 58093542 ~ 58097736 (-)
LOC118939560 NA coding downstream 26667 58073907 ~ 58078433 (-)
LOC118939561 NA coding downstream 34349 58070188 ~ 58070751 (-)
LOC110492401 LOC106566743 coding downstream 104849 57965807 ~ 58000251 (-)
LOC110492399 cdh26 coding downstream 183412 57898471 ~ 57921688 (-)
LOC100136178 LOC100136178 coding upstream 66981 58229061 ~ 58235899 (-)
LOC110492410 LOC106566756 coding upstream 140431 58302511 ~ 58315644 (-)
LOC110492413 LOC106566757 coding upstream 204639 58366719 ~ 58394501 (-)
LOC110492417 LOC106566761 coding upstream 260824 58422904 ~ 58667831 (-)
LOC110491123 LOC106566759 coding upstream 513658 58675738 ~ 58730339 (-)
G1393818 NA non-coding downstream 118637 57984325 ~ 57986463 (-)
G1393804 NA non-coding downstream 140909 57953903 ~ 57964191 (-)
G1393777 NA non-coding downstream 207620 57897266 ~ 57897480 (-)
G1393241 NA non-coding downstream 292559 57812119 ~ 57812541 (-)
G1393236 NA non-coding downstream 301970 57798893 ~ 57803130 (-)
G1393929 NA non-coding upstream 6763 58168843 ~ 58169626 (-)
G1393945 LOC106566749 non-coding upstream 29664 58191744 ~ 58195357 (-)
G1393947 NA non-coding upstream 36439 58198519 ~ 58198778 (-)
G1393955 NA non-coding upstream 50445 58212525 ~ 58212737 (-)
G1393979 NA non-coding upstream 88062 58250142 ~ 58250445 (-)
LOC110492397 NA other downstream 211818 57887491 ~ 57893319 (-)
LOC110492394 psma7 other downstream 251314 57849674 ~ 57853907 (-)
G1391869 NA other downstream 1564171 56538592 ~ 56540929 (-)
G1391796 LOC100286403 other downstream 1667821 56424272 ~ 56437279 (-)
LOC110492371 adcy6 other downstream 1811628 56240763 ~ 56293503 (-)
G1393949 LOC105029132 other upstream 42679 58204759 ~ 58207165 (-)
G1393997 LOC106566752 other upstream 111948 58274028 ~ 58278427 (-)
G1394067 NA other upstream 262378 58424458 ~ 58428113 (-)
G1394341 NA other upstream 584790 58746870 ~ 58747299 (-)
G1393920 NA non-coding downstream 11802 58149598 ~ 58149894 (-)
G1393918 NA non-coding downstream 15636 58145701 ~ 58146060 (-)
G1393917 NA non-coding downstream 18718 58142770 ~ 58142978 (-)
G1393916 NA non-coding downstream 19341 58142135 ~ 58142355 (-)
G1393914 NA non-coding downstream 20613 58140724 ~ 58141083 (-)

Expression


Co-expression Network