Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492418 |
| gene name | LOC106571900 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 58743890 ~ 58792266 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036947393.1 | False | 7035 | mRNA | 0.48 | 15 | 58743890 | 58792194 |
| TU1592197 | True | 968 | lncRNA | 0.38 | 1 | 58791299 | 58792266 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939562 | NA | coding | upstream | 246524 | 58485907 ~ 58497366 (+) |
| LOC110492415 | LOC106566758 | coding | upstream | 337823 | 58399629 ~ 58406067 (+) |
| LOC110492416 | cnbp | coding | upstream | 344733 | 58395461 ~ 58399157 (+) |
| LOC110492412 | LOC106566754 | coding | upstream | 380578 | 58347453 ~ 58363312 (+) |
| LOC110492411 | LOC106566755 | coding | upstream | 408726 | 58318031 ~ 58335164 (+) |
| LOC110492421 | LOC106566609 | coding | downstream | 112757 | 58904951 ~ 58988807 (+) |
| LOC110492422 | LOC106566610 | coding | downstream | 208043 | 59000237 ~ 59112924 (+) |
| LOC110492423 | LOC106566613 | coding | downstream | 352855 | 59145049 ~ 59158966 (+) |
| LOC110492424 | LOC106566614 | coding | downstream | 381801 | 59173995 ~ 59178572 (+) |
| LOC110492426 | LOC106566616 | coding | downstream | 417873 | 59210067 ~ 59275474 (+) |
| G1394248 | NA | non-coding | upstream | 13256 | 58730433 ~ 58730634 (+) |
| G1394210 | NA | non-coding | upstream | 25774 | 58691345 ~ 58718116 (+) |
| G1394209 | NA | non-coding | upstream | 50864 | 58691914 ~ 58693026 (+) |
| G1393666 | NA | non-coding | upstream | 156583 | 58587079 ~ 58587307 (+) |
| G1393665 | NA | non-coding | upstream | 157210 | 58586452 ~ 58586680 (+) |
| G1394296 | NA | non-coding | downstream | 4932 | 58797126 ~ 58797403 (+) |
| G1394312 | NA | non-coding | downstream | 20333 | 58812527 ~ 58812812 (+) |
| G1394313 | NA | non-coding | downstream | 22183 | 58814377 ~ 58814700 (+) |
| G1394416 | NA | non-coding | downstream | 59057 | 58851251 ~ 58851494 (+) |
| G1394426 | NA | non-coding | downstream | 67126 | 58859320 ~ 58859523 (+) |
| G1393647 | LOC106613431 | other | upstream | 177096 | 58566136 ~ 58566794 (+) |
| G1393570 | LOC106566761 | other | upstream | 320388 | 58419386 ~ 58423502 (+) |
| G1392617 | NA | other | upstream | 1341360 | 57401485 ~ 57402530 (+) |
| G1392616 | NA | other | upstream | 1346713 | 57396940 ~ 57397177 (+) |
| G1392601 | NA | other | upstream | 1377373 | 57365951 ~ 57366517 (+) |
| LOC110492427 | brpf1 | other | downstream | 486925 | 59278960 ~ 59290653 (+) |
| G1394888 | NA | other | downstream | 513380 | 59305574 ~ 59306035 (+) |
| G1395932 | NA | other | downstream | 1528609 | 60320803 ~ 60336069 (+) |
| G1396296 | LOC106566651 | other | downstream | 1855066 | 60647260 ~ 60648050 (+) |
| G1396313 | NA | other | downstream | 1905669 | 60697863 ~ 60698313 (+) |
