LOC110491124 (LOC106566606)


Basic Information

Item Value
gene id LOC110491124
gene name LOC106566606
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 58836641 ~ 58847057 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564479.2
CATGCGGGTAGCAAAGGAACTGTGAGAAGGAGATAATCACACTACAATACTTTCTCATCCTTAGTTTTACCTGTGATACCCTCGCAATGACAAGCCGGCGCAGCAAAGGGGACACTTAAGGGGAATTTACGGAAATCATTACAGCTAGGAAACTATATAAAATAATTGAGAGTAACTATTGGGGATATTCGTTGGTATCGACTTGGAGTAACTTTGGATACTTGGACAGTGACTATCGGAGAATATCTATCTATTTATCATTTTCGCTTACACATTGCATGAAACTGAGAGTGGAAGCACCATGAGTCGGAAAACTAGACGCTGGATTTTTCGGGTTTTGCTTTGCCTTGGGATTGTCTATTTGAAAATCGGTGGTTTTTCATCCGTGGTCGCGCTAGGTGCGAGTATAATCTGTAACAAGATTCCCGGGTTGGCTCCCCGACAGCGGATAATCTGCCAGAGTCGCCCGGATGCCATTATTGTCATCGGAGAGGGAGCCCAAATGGGGATCAACGAGTGTCAGTTTCAATTCAAAAATGGGCGCTGGAACTGCTCTGCGCTTGGAGAGAGAACGGTCTTCGGAAAAGAGTTGAAAGTGGGCAGTAAAGAGGCTGCGTTCACCTATGCCATCATTGCGGCCGGAGTTGCCCACGCCATCACTGCAGCCTGTACGCAGGGAAACCTGAGTGACTGCAGCTGTGATACGGAGAAGCAGGGTTTCTACAGTAAAGGCCAGGGCTGGAAGTGGGGCGGCTGTTCAGCAGACATCAGCTACGGCCTGGGCTTCTCAAAGGTGTTCGTTGATGCCAGGGAGGTCAAACAGAACGCCAGGTCTCTCATGAACCTGCATAACAACGAGGTGGGACGCAAGATCCTGGAGAAGAACATGCATCTGGAATGCAAGTGTCACGGTGTTTCTGGCTCCTGCACCACTAAAACCTGCTGGACTAAACTTCCCAAGTTTCGCGAGCTCGGCTACATTCTCAAAGAGAAGTATGCCCATGCTGTGCACGTGGAACCGGTCAAAGCCAGCCGCAACAAGCGGCCCAAATTCCTCAAGATCAAGAAGCCCTACTCCTACCGGAAGCCCATGGACACAGACCTGGTGTTCATTGAGAAGTCCCCTAACTACTGCGAGGCGGACCCGGTGACGGGCAGTATGGGGACACAGGGCCGGATGTGTAATAAGACTGTTACGCAGCAGATCAGCGGCTGTGACCTGATGTGCTGTGGACGGGGGTACAACACACACCAGTACTCCCGCGTGTGGCAGTGCAACTGCAAGTTCCTGTGGTGCTGCTACGTCAAATGCAACACCTGCAGCGAGAGGACAGAGGTGTACACCTGCAAATGACAGTATTTATTGGACCgtcggatgtgtgtgtgtgtgtggggggggggggggggggggggggggggggggtggatgtgtgtgtgtgtgtgcataatggAAACTTTTTTTAGGTAATGGATCATTGCTGTTTTTGCAGCAGTAGACATTGAGGAACTATAAGCAGAAGATGGAACAACAGCGATTTTGTCTGCACACAAtgctccttctcccctctcattGGACATATACTGGGATGCCTGCAACAGATCACCATAAAGGGAAACACActgtgtcctggatggcaggatggGACAGCCTCAGAACATGAACTATAACATACTGCGCtatctgccagccagccagcctagGTTTTTGGACTATGTGTCAATGCTGAGACTGTTAAAAAGCTATGGATGGATGTGTACTATTTGTTGACTGTAGAGTGAATGGATTCCCCCAACGCTCACCATAAATCAATGCTGGATATAATGCTGGACTCTGCTACTACTGTAGTTCTCTGTACCTGTACCCTCTTAGAAAAGGGGTTCTGAAAGGgctcttcagctgtccccatagtataacccttccaggtagaacccttttgggttccatatagaaccctctgtggaaaggattTTACATGGAACCCATAAGGGTTGGTACCAATAAtgattcttcaaagggttctcctatggggacagccaaagaacccttttaggttgtagatagcaccttttttctaagattgtAGCTCAATAAGACACGATATGCACAAATGAAATTAAACAGCCATCGGGAATATTTAACACACTGTATTTAGAGACAAATAAATAATATTAATTTATTTCAAAAAGAAACTACTGATTTTACCCATTATGGAGCAAGTCTTAATTGTGTAGATGGTGGGTTCTTCCCCAATGAGagtttttgttattgttttgtttgttaatGCAATCCAAAATAGAATTTAGAGTCATACACTGGAATTAGGACCACCTGGAATATTCTGTTGCTCCGATTGTTCCAGGTTAGGCTGGTAATAGGCTACTGACATTGACTTTCTCATGAGTTTGTGCTTAATCTGAAAtcctaccctattccctttgtagtggctctggccaaaagtagtgcactatatggggaatagggtgccattttggacatggACTTAGTCTTCCTTCTGTTTGCTGCTAGTCTGGAGAATCCCTCACTGTGGTCTAAGGGCATCAACACTACTGTCTGTGTTGAGTGACAACGCTCACCTCAAGCTGACTAAATTTAACAAGACATATTCAACCAGACACTCTTTTTGGTAAATATTGGTAAAGAGAGTATATTTTGAAAAAGCCTATTTTTATATACATGTCTTATTTATACTATTTCTTCTGGCATATTTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAACATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAACATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAACATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATTCAATATCACACTCTTCCCTCTTTATCCCTCTGGAAAACCCATGTGGGAAAATGTGCCACTGCTGTCACTTCATtgttgtactgtatactgtattgttgtactgtatactgtattgttgtactgtatactgtatgttatttGGAGCCATGTGTTTGTCCCTGTGAATATATGGCTGTGTTCAAACTGCTTTGTTTACTGCATTTCATGACTGCTATGGTTGGAATACAGGAACAGGATAAGACTAACAA
>TU1592300
CTACAATACTTTCTCATCCTTAGTTTTACCTGTGATACCCTCGCAATGACAAGCCGGCGCAGCAAAGGGGACACTTAAGGGGAATTTACGGAAATCATTACAGCTAGGAAACTATATAAAATAATTGAGAGTAACTATTGGGGATATTCGTTGGTATCGACTTGGAGTAACTTTGGATACTTGGACAGTGACTATCGGAGAATATCTATCTATTTATCATTTTCGCTTACACATTGCATGAAACTGAGAGTGGAAGCACCATGAGTCGGAAAACTAGACGCTGGATTTTTCGGGTTTTGCTTTGCCTTGGGATTGTCTATTTGAAAATCGGTGGTTTTTCATCCGTGGTCGCGCTAGGTGCGAGTATAATCTGTAACAAGATTCCCGGGTTGGCTCCCCGACAGCGGATAATCTGCCAGAGTCGCCCGGATGCCATTATTGTCATCGGAGAGGGAGCCCAAATGGGGATCAACGAGTGTCAGTTTCAATTCAAAAATGGGCGCTGGAACTGCTCTGCGCTTGGAGAGAGAACGGTCTTCGGAAAAGAGTTGAAAGTGGGCAGTAAAGAGGCTGCGTTCACCTATGCCATCATTGCGGCCGGAGTTGCCCACGCCATCACTGCAGCCTGTACGCAGGGAAACCTGAGTGACTGCAGCTGTGATACGGAGAAGCAGGGTTTCTACAGTAAAGGCCAGGGCTGGAAGTGGGGCGGCTGTTCAGCAGACATCAGCTACGGCCTGGGCTTCTCAAAGGTGTTCGTTGATGCCAGGGAGGTCAAACAGAACGCCAGGTCTCTCATGAACCTGCATAACAACGAGGTGGGACGCAAGATCCTGGAGAAGAACATGCATCTGGAATGCAAGTGTCACGGTGTTTCTGGCTCCTGCACCACTAAAACCTGCTGGACTAAACTTCCCAAGTTTCGCGAGCTCGGCTACATTCTCAAAGAGAAGTATGCCCATGCTGTGCACGTGGAACCGGTCAAAGCCAGCCGCAACAAGCGGCCCAAATTCCTCAAGATCAAGAAGCCCTACTCCTACCGGAAGCCCATGGACACAGACCTGGTGTTCATTGAGAAGTCCCCTAACTACTGCGAGGCGGACCCGGTGACGGGCAGTATGGGGACACAGGGCCGGATGTGTAATAAGACTGTTACGCAGCAGATCAGCGGCTGTGACCTGATGTGCTGTGGACGGGGGTACAACACACACCAGTACTCCCGCGTGTGGCAGTGCAACTGCAAGTTCCTGTGGTGCTGCTACGTCAAATGCAACACCTGCAGCGAGAGGACAGA

Function

NR:

description
PREDICTED: protein Wnt-7a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564479.2 False 3450 mRNA 0.45 4 58836641 58847057
TU1592300 True 1294 TUCP 0.51 4 58838756 58847016

Neighbor

gene id symbol gene type direction distance location
LOC110491123 LOC106566759 coding downstream 106302 58675738 ~ 58730339 (-)
LOC110492417 LOC106566761 coding downstream 168810 58422904 ~ 58667831 (-)
LOC110492413 LOC106566757 coding downstream 442140 58366719 ~ 58394501 (-)
LOC110492410 LOC106566756 coding downstream 520997 58302511 ~ 58315644 (-)
LOC100136178 LOC100136178 coding downstream 600742 58229061 ~ 58235899 (-)
LOC110492419 LOC106566607 coding upstream 18492 58865549 ~ 58870791 (-)
LOC118939563 cf105 coding upstream 24692 58871749 ~ 58877502 (-)
LOC110492420 NA coding upstream 39619 58886676 ~ 58896965 (-)
LOC118939564 NA coding upstream 172847 59019837 ~ 59051938 (-)
LOC110492425 LOC106566615 coding upstream 328877 59175934 ~ 59206144 (-)
G1394399 NA non-coding downstream 9481 58826797 ~ 58827160 (-)
G1394390 NA non-coding downstream 23640 58812747 ~ 58813001 (-)
G1394384 NA non-coding downstream 30117 58806312 ~ 58806524 (-)
G1394376 LOC106566675 non-coding downstream 46231 58788659 ~ 58790410 (-)
G1394250 NA non-coding downstream 104710 58731701 ~ 58731931 (-)
G1394447 NA non-coding upstream 30995 58878052 ~ 58878279 (-)
G1394450 NA non-coding upstream 32330 58879387 ~ 58879857 (-)
G1394656 NA non-coding upstream 57268 58904325 ~ 58904573 (-)
G1394670 NA non-coding upstream 85984 58933041 ~ 58935197 (-)
G1394341 NA other downstream 89342 58746870 ~ 58747299 (-)
G1394067 NA other downstream 408528 58424458 ~ 58428113 (-)
G1393997 LOC106566752 other downstream 558214 58274028 ~ 58278427 (-)
G1393949 LOC105029132 other downstream 629476 58204759 ~ 58207165 (-)
G1394768 LOC106566610 other upstream 264315 59111372 ~ 59112897 (-)
G1394978 LOC106566621 other upstream 507143 59354200 ~ 59356849 (-)
G1396467 NA other upstream 1707699 60554756 ~ 60582035 (-)
LOC118939463 NA other upstream 1814499 60661556 ~ 60672085 (-)
G1396543 NA other upstream 1846552 60693609 ~ 60694036 (-)

Expression


Co-expression Network