Item | Value |
---|---|
gene id | LOC110492434 |
gene name | rbsn |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048580.1 |
NCBI id | CM023234.2 |
chromosome length | 78541548 |
location | 59730615 ~ 59745377 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
rbsn | Predicted to enable metal ion binding activity. |
description |
---|
rabenosyn-5-like isoform X1 |
id | description |
---|---|
K12481 | RBSN, ZFYVE20; rabenosyn-5 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021566753.2 | False | 5075 | mRNA | 0.49 | 13 | 59730615 | 59745377 |
XM_036947429.1 | False | 5229 | mRNA | 0.49 | 14 | 59730617 | 59745377 |
XM_036947430.1 | False | 5172 | mRNA | 0.49 | 14 | 59730617 | 59745377 |
XM_021566751.2 | False | 5110 | mRNA | 0.49 | 13 | 59730619 | 59745377 |
XM_021566752.2 | True | 5373 | mRNA | 0.49 | 13 | 59730883 | 59745377 |
59,730,000
59,732,000
59,734,000
59,736,000
59,738,000
59,740,000
59,742,000
59,744,000
59,746,000
59,748,000
59,750,000
59,752,000
59,754,000
59,756,000
59,758,000
59,760,000
59,762,000
NC_048580.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
si:dkey-93l1.9 | LOC106566628 | coding | upstream | 1116 | 59725743 ~ 59729499 (+) |
trh | trh | coding | upstream | 6748 | 59718862 ~ 59723867 (+) |
ift122 | ift122 | coding | upstream | 320710 | 59378151 ~ 59409905 (+) |
LOC110492429 | LOC106566622 | coding | upstream | 363477 | 59359297 ~ 59367138 (+) |
wu:fl23c11 | LOC106566621 | coding | upstream | 375090 | 59332772 ~ 59355525 (+) |
b3galt4 | b3galt4 | coding | downstream | 33361 | 59778738 ~ 59784334 (+) |
LOC118936306 | st1s3 | coding | downstream | 65094 | 59810471 ~ 59819919 (+) |
LOC110492439 | LOC106566634 | coding | downstream | 77890 | 59823267 ~ 59840414 (+) |
LOC110492441 | LOC106566636 | coding | downstream | 103620 | 59848997 ~ 59856485 (+) |
LOC110492458 | st2s2 | coding | downstream | 132622 | 59877999 ~ 59881141 (+) |
G1395413 | NA | non-coding | upstream | 21860 | 59708534 ~ 59708755 (+) |
G1395398 | NA | non-coding | upstream | 33853 | 59696543 ~ 59696762 (+) |
G1395392 | NA | non-coding | upstream | 37718 | 59692616 ~ 59692897 (+) |
G1395376 | NA | non-coding | upstream | 49270 | 59680728 ~ 59681345 (+) |
G1395366 | NA | non-coding | upstream | 55758 | 59674649 ~ 59674857 (+) |
G1395470 | NA | non-coding | downstream | 7514 | 59752891 ~ 59753116 (+) |
G1395475 | nr2c2 | non-coding | downstream | 22147 | 59767524 ~ 59767884 (+) |
G1395480 | NA | non-coding | downstream | 30535 | 59775912 ~ 59776186 (+) |
G1395512 | wdr46 | non-coding | downstream | 43227 | 59788604 ~ 59792466 (+) |
G1395527 | NA | non-coding | downstream | 64701 | 59810078 ~ 59810304 (+) |
G1394888 | NA | other | upstream | 424580 | 59305574 ~ 59306035 (+) |
LOC110492427 | brpf1 | other | upstream | 449516 | 59278960 ~ 59290653 (+) |
G1393647 | LOC106613431 | other | upstream | 1163821 | 58566136 ~ 58566794 (+) |
G1393570 | LOC106566761 | other | upstream | 1307113 | 58419386 ~ 58423502 (+) |
G1392617 | NA | other | upstream | 2328085 | 57401485 ~ 57402530 (+) |
G1395932 | NA | other | downstream | 575426 | 60320803 ~ 60336069 (+) |
G1396296 | LOC106566651 | other | downstream | 901883 | 60647260 ~ 60648050 (+) |
G1396313 | NA | other | downstream | 952486 | 60697863 ~ 60698313 (+) |
G1396606 | NA | other | downstream | 1060382 | 60805759 ~ 60808292 (+) |
G1396801 | LOC106566672 | other | downstream | 1468358 | 61213735 ~ 61223022 (+) |