ogg1 (ogg1)


Basic Information

Item Value
gene id ogg1
gene name ogg1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 59916200 ~ 59925485 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566789.2
aggagggtttCACAAATGTGTTGGTTGATTGCATCAGACAGTAGACGAATGAAATGATACGTTTGAGGAATTCCTGAAAAATCATTAATACGCAGAATAATGTTTAAATATTAACTAGGAAGTCAAATTGGCTGTTAATGTAAGAACGTAGTGACAAATATAGTATGTTAGTCAAAGCGGAAAGGGCACTCCGCGTAATCTTTATTTTCCATTCGCAAGAGTCAAACACCGGGAAAGTCATTATAGGCCCACACACATCCAGGGAGTGAAGATACGTGTAAACATCTGCTCTCAAAATATACTCCACTGTTCATCTCATCAGATATCTCTGATACTACAGTATGTGGTGAGTGATCCAGCACTATGTCCCAGCATGCATTGCTGTCGGCGGGGACCAAGTCATGGCGCTCCCTGGCCTGCTCACGATCAGAGCTCCGTTTGGACCTCACACTAGGCTGCGGACAGAGCTTCCGCTGGCGAGAGACAGGAGATGGCCACTGGACCGGAGTGATGGGGGGACGAGTGTGGACTCTCACCCAGACAGACGACACACTATGGTACCACACATACAATAGCCCCAACACCatgggaggggatgggaggaagCGGAGGGCAGGTTCCTTGCTCCAGGGGTCAAAAGGGTCAGGGAAAAGATCCAAGGGAGTGATAGaggtgaaggaggaagaagagggggagccAGTGGCTGTGACCCCAGACAGGAAGGAGGAAGAGCTGCTGAATGATTATTTCCAGCTGAAGGTGAAGCTGGGGGATCTGTACAGAGATTGGGGAGCAGCCGACCCACACTTTAACAGCATTGCCAAGATCTTCACAGGTGTGCGTATGCTGCGTCAGGACCCCACAGAGTGCCTGTTCTCCTTCATCTGCACCTCTAACAACCACATATCTCGTATCCAGGGCATGGTGGAGAGGCTGTGCCAGTCCTTGGGCACCCCTCTGTGTCAGCTGGACCAGACCAGCTACCACGACTTCCCCTCCCTGCATGCACTCGCAGACAACAGTGTGGAGGCTTGTCTGAGGGACCTGGGGTTTGGATACAGGGCCAGGTTCCTGCAGCAGAGTGCAAGACAGATCCTGGACTCTCACGGTGGGCCCCATTGGCTCCAGGGGCTCCGCAGTGCCCCCTACCTGCAGGCACGTGACGCACTGCGCACCCTGCCCGGGGTAGGCCCCAAGGTggcagactgtgtgtgtctgatgtcTCTGGAAAAGGCCTGTGTTGTGCCTGTGGATACACACGTGTGGCAAATCGCAAAACGAGACTACAGTTGTGCGGCAGGCAACGGGCAGAAGAGCCTCACAGACAAGGTCCACCGTCAAATAGGGGACTTCTTCAGGCAGCTGTGGGGTCCTTATGCTGGTTGGGCACACTCGGTGTTGTTCTGTTCCGACCTGAAGAAGTTCCAGAAGCTGAAAGAAACACACTCTctgaaacaggaggaggaggagaaggtcaAGATAAAGGCGGAGGGAGAGGGAATAAACAAGACAATTCAAAAAATGTGTAATAGAAAGGTGAACATGTCtgtgaaggaggaggtggagtGAGGTCAGTAGAAGTTATGTGTTGGTGATTTATGTTATTTCAGGAAGCTAACCTGAATGTATGTCATTCTTTGCACACCTCTCTGGAGCAACTAGGCTATGAGTCTGACTGTTTTACCTGTTCTCTTCAGGTTCATGACATGATTAACTGCAAACCAAGGTCGCTGTCAGTGGAGATTGTTCCTGATCACTTTGTAGAATGATGTAAAACAGAGCTAAATGTGATACACGCTTTAATAGAGAGTTCACTCTGAACCAGACTTCTCACATTATCTGTCATACATTTATGTTCAGCTCTAAACTGAAGGCTGGTGTTTAATTTTACTGCAATTTCTGTCTGTGAATGAAGCTCTATAGGTATGTGTCATTTTCCACTGCCGTCTCTACATATGAACTACAAACATAGAAACCGTGTGTTTATCATATCTTTTCTAGATGAATGGACCACTACACAGACTCTGTAACAGTTCATTTTTATACTGAAATTAACAGGTTTTGGACTACTTTCCTTTGTCAGTGTTGTTTGGAGATTATGCACACATTTTGAATAAGTCTATTTGTGGATAATCCCACTCCTTTGATCCCCTATATTTGTCTTTCCATCAGTGTAGTATGCTTAGACCATAGAGTTAGAGGACTCTAGTTGGATAAATGGGACATATATTATATCCCTATTATTCTCTATGACCCAGACAGAAAAGGTGCAGAGCGTCAGAGGTGGCCTCTAGATGGCAATAAGATATGGGAAGATTCTGCATCATAGTATCATGTGATTTTTCCAGGTCAGTCACTGTTAAAAGATTATTCTACTTTATTCTTCATTGTTTGCTGAGCTTATATTAAGTATTCAATGGCCCTCAGGGTAGCCTATGTGCCAATGCATTTAGCGGTGTTGACGTGTGCAGGTTCGTATGTCCAAAAATGTTGTCCATTACTGGTGCAATACACACTCAATCTCTCTTGACGATTCTATATGTTTACTGTGCATATCTGTGAGTCTGTCCAAAATAAGCAGTATATCCGGCCAGCTGTGAAATGCCATGGTGTCTGTACATGTATCTATAGGCATTAGTCAGGTGCGTCAGCATGTCTGTTTATAGTTGGGATTGCAGTTATCTGCCCTCAGTGCTATGAGCTATAAGTGTGTGTATGTCACTCTGGGCTGTCACTGGTGTCTAGGATAGTGTGGGCTATATGGGAGTCACTGGGAGAGTTTGACTGTAATATAACCTGTATGTAACGTAGATCTTTTTTTAG
>XM_021566790.2
aggagggtttCACAAATGTGTTGGTTGATTGCATCAGACAGTAGACGAATGAAATGATACGTTTGAGGAATTCCTGAAAAATCATTAATACGCAGAATAATGTTTAAATATTAACTAGGAAGTCAAATTGGCTGTTAATGTAAGAACGTAGTGACAAATATAGTATGTTAGTCAAAGCGGAAAGGGCACTCCGCGTAATCTTTATTTTCCATTCGCAAGAGTCAAACACCGGGAAAGTCATTATAGGCCCACACACATCCAGGGAGTGAAGATACGTGTAAACATCTGCTCTCAAATATGTGGTGAGTGATCCAGCACTATGTCCCAGCATGCATTGCTGTCGGCGGGGACCAAGTCATGGCGCTCCCTGGCCTGCTCACGATCAGAGCTCCGTTTGGACCTCACACTAGGCTGCGGACAGAGCTTCCGCTGGCGAGAGACAGGAGATGGCCACTGGACCGGAGTGATGGGGGGACGAGTGTGGACTCTCACCCAGACAGACGACACACTATGGTACCACACATACAATAGCCCCAACACCatgggaggggatgggaggaagCGGAGGGCAGGTTCCTTGCTCCAGGGGTCAAAAGGGTCAGGGAAAAGATCCAAGGGAGTGATAGaggtgaaggaggaagaagagggggagccAGTGGCTGTGACCCCAGACAGGAAGGAGGAAGAGCTGCTGAATGATTATTTCCAGCTGAAGGTGAAGCTGGGGGATCTGTACAGAGATTGGGGAGCAGCCGACCCACACTTTAACAGCATTGCCAAGATCTTCACAGGTGTGCGTATGCTGCGTCAGGACCCCACAGAGTGCCTGTTCTCCTTCATCTGCACCTCTAACAACCACATATCTCGTATCCAGGGCATGGTGGAGAGGCTGTGCCAGTCCTTGGGCACCCCTCTGTGTCAGCTGGACCAGACCAGCTACCACGACTTCCCCTCCCTGCATGCACTCGCAGACAACAGTGTGGAGGCTTGTCTGAGGGACCTGGGGTTTGGATACAGGGCCAGGTTCCTGCAGCAGAGTGCAAGACAGATCCTGGACTCTCACGGTGGGCCCCATTGGCTCCAGGGGCTCCGCAGTGCCCCCTACCTGCAGGCACGTGACGCACTGCGCACCCTGCCCGGGGTAGGCCCCAAGGTggcagactgtgtgtgtctgatgtcTCTGGAAAAGGCCTGTGTTGTGCCTGTGGATACACACGTGTGGCAAATCGCAAAACGAGACTACAGTTGTGCGGCAGGCAACGGGCAGAAGAGCCTCACAGACAAGGTCCACCGTCAAATAGGGGACTTCTTCAGGCAGCTGTGGGGTCCTTATGCTGGTTGGGCACACTCGGTGTTGTTCTGTTCCGACCTGAAGAAGTTCCAGAAGCTGAAAGAAACACACTCTctgaaacaggaggaggaggagaaggtcaAGATAAAGGCGGAGGGAGAGGGAATAAACAAGACAATTCAAAAAATGTGTAATAGAAAGGTGAACATGTCtgtgaaggaggaggtggagtGAGGTCAGTAGAAGTTATGTGTTGGTGATTTATGTTATTTCAGGAAGCTAACCTGAATGTATGTCATTCTTTGCACACCTCTCTGGAGCAACTAGGCTATGAGTCTGACTGTTTTACCTGTTCTCTTCAGGTTCATGACATGATTAACTGCAAACCAAGGTCGCTGTCAGTGGAGATTGTTCCTGATCACTTTGTAGAATGATGTAAAACAGAGCTAAATGTGATACACGCTTTAATAGAGAGTTCACTCTGAACCAGACTTCTCACATTATCTGTCATACATTTATGTTCAGCTCTAAACTGAAGGCTGGTGTTTAATTTTACTGCAATTTCTGTCTGTGAATGAAGCTCTATAGGTATGTGTCATTTTCCACTGCCGTCTCTACATATGAACTACAAACATAGAAACCGTGTGTTTATCATATCTTTTCTAGATGAATGGACCACTACACAGACTCTGTAACAGTTCATTTTTATACTGAAATTAACAGGTTTTGGACTACTTTCCTTTGTCAGTGTTGTTTGGAGATTATGCACACATTTTGAATAAGTCTATTTGTGGATAATCCCACTCCTTTGATCCCCTATATTTGTCTTTCCATCAGTGTAGTATGCTTAGACCATAGAGTTAGAGGACTCTAGTTGGATAAATGGGACATATATTATATCCCTATTATTCTCTATGACCCAGACAGAAAAGGTGCAGAGCGTCAGAGGTGGCCTCTAGATGGCAATAAGATATGGGAAGATTCTGCATCATAGTATCATGTGATTTTTCCAGGTCAGTCACTGTTAAAAGATTATTCTACTTTATTCTTCATTGTTTGCTGAGCTTATATTAAGTATTCAATGGCCCTCAGGGTAGCCTATGTGCCAATGCATTTAGCGGTGTTGACGTGTGCAGGTTCGTATGTCCAAAAATGTTGTCCATTACTGGTGCAATACACACTCAATCTCTCTTGACGATTCTATATGTTTACTGTGCATATCTGTGAGTCTGTCCAAAATAAGCAGTATATCCGGCCAGCTGTGAAATGCCATGGTGTCTGTACATGTATCTATAGGCATTAGTCAGGTGCGTCAGCATGTCTGTTTATAGTTGGGATTGCAGTTATCTGCCCTCAGTGCTATGAGCTATAAGTGTGTGTATGTCACTCTGGGCTGTCACTGGTGTCTAGGATAGTGTGGGCTATATGGGAGTCACTGGGAGAGTTTGACTGTAATATAACCTGTATGTAACGTAGATCTTTTTTTAG
>XM_021566788.2
GAGGCtcctgaggaggggaggagggtttCACAAATGTGTTGGTTGATTGCATCAGACAGTAGACGAATGAAATGATACGTTTGAGGAATTCCTGAAAAATCATTAATACGCAGAATAATGTTTAAATATTAACTAGGAAGTCAAATTGGCTGTTAATGTAAGAACGTAGTGACAAATATAGTATGTTAGTCAAAGCGGAAAGGGCACTCCGCGTAATCTTTATTTTCCATTCGCAAGAGTCAAACACCGGGAAAGTCATTATAGGCCCACACACATCCAGGGAGTGAAGATACGTGTAAACATCTGCTCTCAAAATATCTCTGATACTACAGTATGTGGTGAGTGATCCAGCACTATGTCCCAGCATGCATTGCTGTCGGCGGGGACCAAGTCATGGCGCTCCCTGGCCTGCTCACGATCAGAGCTCCGTTTGGACCTCACACTAGGCTGCGGACAGAGCTTCCGCTGGCGAGAGACAGGAGATGGCCACTGGACCGGAGTGATGGGGGGACGAGTGTGGACTCTCACCCAGACAGACGACACACTATGGTACCACACATACAATAGCCCCAACACCatgggaggggatgggaggaagCGGAGGGCAGGTTCCTTGCTCCAGGGGTCAAAAGGGTCAGGGAAAAGATCCAAGGGAGTGATAGaggtgaaggaggaagaagagggggagccAGTGGCTGTGACCCCAGACAGGAAGGAGGAAGAGCTGCTGAATGATTATTTCCAGCTGAAGGTGAAGCTGGGGGATCTGTACAGAGATTGGGGAGCAGCCGACCCACACTTTAACAGCATTGCCAAGATCTTCACAGGTGTGCGTATGCTGCGTCAGGACCCCACAGAGTGCCTGTTCTCCTTCATCTGCACCTCTAACAACCACATATCTCGTATCCAGGGCATGGTGGAGAGGCTGTGCCAGTCCTTGGGCACCCCTCTGTGTCAGCTGGACCAGACCAGCTACCACGACTTCCCCTCCCTGCATGCACTCGCAGACAACAGTGTGGAGGCTTGTCTGAGGGACCTGGGGTTTGGATACAGGGCCAGGTTCCTGCAGCAGAGTGCAAGACAGATCCTGGACTCTCACGGTGGGCCCCATTGGCTCCAGGGGCTCCGCAGTGCCCCCTACCTGCAGGCACGTGACGCACTGCGCACCCTGCCCGGGGTAGGCCCCAAGGTggcagactgtgtgtgtctgatgtcTCTGGAAAAGGCCTGTGTTGTGCCTGTGGATACACACGTGTGGCAAATCGCAAAACGAGACTACAGTTGTGCGGCAGGCAACGGGCAGAAGAGCCTCACAGACAAGGTCCACCGTCAAATAGGGGACTTCTTCAGGCAGCTGTGGGGTCCTTATGCTGGTTGGGCACACTCGGTGTTGTTCTGTTCCGACCTGAAGAAGTTCCAGAAGCTGAAAGAAACACACTCTctgaaacaggaggaggaggagaaggtcaAGATAAAGGCGGAGGGAGAGGGAATAAACAAGACAATTCAAAAAATGTGTAATAGAAAGGTGAACATGTCtgtgaaggaggaggtggagtGAGGTCAGTAGAAGTTATGTGTTGGTGATTTATGTTATTTCAGGAAGCTAACCTGAATGTATGTCATTCTTTGCACACCTCTCTGGAGCAACTAGGCTATGAGTCTGACTGTTTTACCTGTTCTCTTCAGGTTCATGACATGATTAACTGCAAACCAAGGTCGCTGTCAGTGGAGATTGTTCCTGATCACTTTGTAGAATGATGTAAAACAGAGCTAAATGTGATACACGCTTTAATAGAGAGTTCACTCTGAACCAGACTTCTCACATTATCTGTCATACATTTATGTTCAGCTCTAAACTGAAGGCTGGTGTTTAATTTTACTGCAATTTCTGTCTGTGAATGAAGCTCTATAGGTATGTGTCATTTTCCACTGCCGTCTCTACATATGAACTACAAACATAGAAACCGTGTGTTTATCATATCTTTTCTAGATGAATGGACCACTACACAGACTCTGTAACAGTTCATTTTTATACTGAAATTAACAGGTTTTGGACTACTTTCCTTTGTCAGTGTTGTTTGGAGATTATGCACACATTTTGAATAAGTCTATTTGTGGATAATCCCACTCCTTTGATCCCCTATATTTGTCTTTCCATCAGTGTAGTATGCTTAGACCATAGAGTTAGAGGACTCTAGTTGGATAAATGGGACATATATTATATCCCTATTATTCTCTATGACCCAGACAGAAAAGGTGCAGAGCGTCAGAGGTGGCCTCTAGATGGCAATAAGATATGGGAAGATTCTGCATCATAGTATCATGTGATTTTTCCAGGTCAGTCACTGTTAAAAGATTATTCTACTTTATTCTTCATTGTTTGCTGAGCTTATATTAAGTATTCAATGGCCCTCAGGGTAGCCTATGTGCCAATGCATTTAGCGGTGTTGACGTGTGCAGGTTCGTATGTCCAAAAATGTTGTCCATTACTGGTGCAATACACACTCAATCTCTCTTGACGATTCTATATGTTTACTGTGCATATCTGTGAGTCTGTCCAAAATAAGCAGTATATCCGGCCAGCTGTGAAATGCCATGGTGTCTGTACATGTATCTATAGGCATTAGTCAGGTGCGTCAGCATGTCTGTTTATAGTTGGGATTGCAGTTATCTGCCCTCAGTGCTATGAGCTATAAGTGTGTGTATGTCACTCTGGGCTGTCACTGGTGTCTAGGATAGTGTGGGCTATATGGGAGTCACTGGGAGAGTTTGACTGTAATATAACCTGTATGTAACGTAGATCTTTTTTTAG

Function

symbol description
ogg1 Predicted to enable 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity. Acts upstream of or within animal organ development; negative regulation of neuron apoptotic process; and regulation of neuron projection development. Predicted to be active in nucleus. Is expressed in several structures, including anterior lateral plate mesoderm; anterior presumptive neural plate; nervous system; pericardial region; and pronephric duct. Human ortholog(s) of this gene implicated in several diseases, including Graves' disease; angiomyolipoma; carcinoma (multiple); eye disease (multiple); and reproductive organ cancer (multiple). Orthologous to human OGG1 (8-oxoguanine DNA glycosylase).

NR:

description
N-glycosylase/DNA lyase

GO:

id name namespace
GO:0006284 base-excision repair biological_process
GO:0006289 nucleotide-excision repair biological_process
GO:0003684 damaged DNA binding molecular_function
GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity molecular_function

KEGG:

id description
K03660 OGG1; N-glycosylase/DNA lyase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566789.2 False 2823 mRNA 0.47 8 59916200 59925467
XM_021566790.2 False 2779 mRNA 0.47 8 59916200 59925467
XM_021566788.2 True 2815 mRNA 0.47 8 59916200 59925485

Neighbor

gene id symbol gene type direction distance location
LOC110492455 LOC106566637 coding downstream 4428 59881132 ~ 59911772 (-)
LOC110492442 LOC106566634 coding downstream 48664 59862466 ~ 59867536 (-)
wdr46 wdr46 coding downstream 120456 59788564 ~ 59795744 (-)
nr2c2 nr2c2 coding downstream 140837 59761804 ~ 59775363 (-)
mrps25 mrps25 coding downstream 163619 59745376 ~ 59752581 (-)
LOC110492460 LOC106566640 coding upstream 16220 59941705 ~ 59946884 (-)
LOC110492462 NA coding upstream 33676 59959161 ~ 59961425 (-)
LOC110491132 LOC106566643 coding upstream 57795 59983280 ~ 60049509 (-)
LOC110492464 NA coding upstream 208767 60134252 ~ 60137371 (-)
LOC110491133 LOC106566645 coding upstream 213644 60139129 ~ 60343362 (-)
G1395667 NA non-coding downstream 37474 59854928 ~ 59878726 (-)
G1395659 NA non-coding downstream 71422 59844302 ~ 59844778 (-)
G1395657 NA non-coding downstream 91174 59823630 ~ 59825026 (-)
G1395656 NA non-coding downstream 94037 59821863 ~ 59822163 (-)
G1395635 NA non-coding downstream 95742 59818833 ~ 59820458 (-)
G1395691 NA non-coding upstream 7387 59932872 ~ 59933137 (-)
G1395693 LOC106566639 non-coding upstream 11057 59936542 ~ 59936892 (-)
G1395699 NA non-coding upstream 36138 59961623 ~ 59961886 (-)
G1395751 NA non-coding upstream 130699 60056184 ~ 60056538 (-)
G1394978 LOC106566621 other downstream 559351 59354200 ~ 59356849 (-)
G1394768 LOC106566610 other downstream 803303 59111372 ~ 59112897 (-)
LOC110491124 LOC106566606 other downstream 1069184 58836641 ~ 58847057 (-)
G1394341 NA other downstream 1168901 58746870 ~ 58747299 (-)
G1394067 NA other downstream 1488087 58424458 ~ 58428113 (-)
G1396467 NA other upstream 629271 60554756 ~ 60582035 (-)
LOC118939463 NA other upstream 736071 60661556 ~ 60672085 (-)
G1396543 NA other upstream 768124 60693609 ~ 60694036 (-)
abhd6b LOC106566659 other upstream 827620 60753006 ~ 60758788 (-)
G1398619 NA other upstream 2809258 62734743 ~ 62735569 (-)

Expression


Co-expression Network