LOC118939567


Basic Information

Item Value
gene id LOC118939567
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 60924339 ~ 60926565 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036571.1
GGCAGGATTGGAGGCAGCATCTCAATTCCGTTAATTTAGGAAGTGCATTGAAGTTCCTATTCAAGAACTGAAAAATAATCTGAATTTCAGACTTGTACAAAAGGCCAGCCTTCTCAATCTGATTGGCCTGCAGCCCTGTCAatcactcttcatacctctgttCACCTCTGTTCGCTTGGACACATTCCAGGGCTCCAGCCCCACATACCTTGTGTTAGATTGTGTTCACTTGCCGTCTCAAGAAGAAACAAGTATTTTGTAATGACGGACTTCAACATGCTGTTTGCCTATCTTCAAGTGTTGTGCATCCATCGAACATAACCACACAACAATATAAAGAACATTAATGGAATCAGCTGTGGTGGTGACCAAATGTTCAGTATGGGCCTCAGCATGGACAACACTGTAGTGAGAAGAACCTAAGCAATCAGCATAAGTTACTAgcgggtgagggcattcacagccgagCTCCTGTTAGCcaattttttcatttttaatttagctaccaatagtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036571.1 True 514 mRNA 0.43 2 60924339 60926565

Neighbor

gene id symbol gene type direction distance location
LOC110492482 LOC106566665 coding downstream 84311 60833073 ~ 60840028 (-)
si:ch73-233m11.2 LOC106566663 coding downstream 112092 60803485 ~ 60812247 (-)
slmapb LOC106566662 coding downstream 133495 60777078 ~ 60790844 (-)
abhd6b LOC106566659 coding downstream 165551 60753006 ~ 60758788 (-)
kctd6b kctd6 coding downstream 171587 60749758 ~ 60752752 (-)
LOC110492489 LOC106566669 coding upstream 46457 60973022 ~ 60979513 (-)
LOC110492499 LOC106566672 coding upstream 235407 61161972 ~ 61241877 (-)
LOC110491138 LOC106571845 coding upstream 402776 61329341 ~ 61456466 (-)
LOC110492491 LOC106566602 coding upstream 599147 61525712 ~ 61551754 (-)
asb14b LOC106566601 coding upstream 625765 61552330 ~ 61558422 (-)
G1397660 NA non-coding downstream 10230 60911974 ~ 60914109 (-)
G1397663 slc6a6 non-coding downstream 12419 60909388 ~ 60911920 (-)
G1397662 LOC106571856 non-coding downstream 18782 60895914 ~ 60905557 (-)
G1397641 NA non-coding downstream 131287 60792772 ~ 60793052 (-)
G1396551 NA non-coding downstream 218773 60705126 ~ 60705566 (-)
G1397784 NA non-coding upstream 157468 61084033 ~ 61085092 (-)
G1397790 NA non-coding upstream 167442 61094007 ~ 61094705 (-)
G1397822 NA non-coding upstream 216880 61143445 ~ 61144807 (-)
G1397826 NA non-coding upstream 227607 61154172 ~ 61154372 (-)
G1397828 NA non-coding upstream 229970 61156535 ~ 61156792 (-)
G1396543 NA other downstream 230303 60693609 ~ 60694036 (-)
LOC118939463 NA other downstream 260823 60661556 ~ 60672085 (-)
G1396467 NA other downstream 342304 60554756 ~ 60582035 (-)
G1394978 LOC106566621 other downstream 1567490 59354200 ~ 59356849 (-)
G1398619 NA other upstream 1808178 62734743 ~ 62735569 (-)
G1399235 NA other upstream 2272554 63199119 ~ 63292201 (-)
G1399367 NA other upstream 2458284 63384849 ~ 63385262 (-)
G1400503 zhx3 other upstream 3176805 64103370 ~ 64105039 (-)
G1400552 NA other upstream 3330361 64256926 ~ 64257433 (-)

Expression


Co-expression Network