Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492509 |
| gene name | LOC106566095 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 61595093 ~ 61601423 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 40S ribosomal protein S23 isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0015935 | small ribosomal subunit | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02973 | RP-S23e, RPS23; small subunit ribosomal protein S23e |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021566896.2 | False | 593 | mRNA | 0.48 | 4 | 61595093 | 61596712 |
| XM_021566895.2 | True | 634 | mRNA | 0.51 | 4 | 61595093 | 61601423 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dnah12 | dnah12 | coding | downstream | 272 | 61558700 ~ 61594821 (-) |
| asb14b | LOC106566601 | coding | downstream | 36671 | 61552330 ~ 61558422 (-) |
| LOC110492491 | LOC106566602 | coding | downstream | 43339 | 61525712 ~ 61551754 (-) |
| LOC110491138 | LOC106571845 | coding | downstream | 138627 | 61329341 ~ 61456466 (-) |
| LOC110492499 | LOC106566672 | coding | downstream | 353216 | 61161972 ~ 61241877 (-) |
| LOC110492507 | LOC106566595 | coding | upstream | 85824 | 61687247 ~ 61689079 (-) |
| LOC110492496 | LOC106566592 | coding | upstream | 177695 | 61779118 ~ 61796715 (-) |
| LOC110492510 | LOC106566591 | coding | upstream | 213121 | 61814544 ~ 61943821 (-) |
| LOC110529871 | zbtb46 | coding | upstream | 579806 | 62181229 ~ 62311208 (-) |
| uckl1b | uckl1 | coding | upstream | 727365 | 62328788 ~ 62386980 (-) |
| G1397992 | NA | non-coding | downstream | 87230 | 61492168 ~ 61507863 (-) |
| G1397951 | NA | non-coding | downstream | 174493 | 61420186 ~ 61420600 (-) |
| G1397819 | NA | non-coding | downstream | 435432 | 61158624 ~ 61159661 (-) |
| G1397828 | NA | non-coding | downstream | 438301 | 61156535 ~ 61156792 (-) |
| G1397826 | NA | non-coding | downstream | 440721 | 61154172 ~ 61154372 (-) |
| G1398030 | NA | non-coding | upstream | 2523 | 61603946 ~ 61604162 (-) |
| G1398033 | NA | non-coding | upstream | 4586 | 61606009 ~ 61606353 (-) |
| G1398035 | NA | non-coding | upstream | 10748 | 61612171 ~ 61612404 (-) |
| G1398036 | NA | non-coding | upstream | 12815 | 61614238 ~ 61614440 (-) |
| G1398041 | NA | non-coding | upstream | 18410 | 61619833 ~ 61620260 (-) |
| abhd6b | LOC106566659 | other | downstream | 840222 | 60753006 ~ 60758788 (-) |
| G1396543 | NA | other | downstream | 901057 | 60693609 ~ 60694036 (-) |
| LOC118939463 | NA | other | downstream | 931577 | 60661556 ~ 60672085 (-) |
| G1396467 | NA | other | downstream | 1013058 | 60554756 ~ 60582035 (-) |
| G1394978 | LOC106566621 | other | downstream | 2238244 | 59354200 ~ 59356849 (-) |
| G1398619 | NA | other | upstream | 1133320 | 62734743 ~ 62735569 (-) |
| G1399235 | NA | other | upstream | 1597696 | 63199119 ~ 63292201 (-) |
| G1399367 | NA | other | upstream | 1783426 | 63384849 ~ 63385262 (-) |
| G1400503 | zhx3 | other | upstream | 2501947 | 64103370 ~ 64105039 (-) |
| G1400552 | NA | other | upstream | 2655503 | 64256926 ~ 64257433 (-) |
