cttnbp2nlb (cttnbp2nl)


Basic Information

Item Value
gene id cttnbp2nlb
gene name cttnbp2nl
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 65660280 ~ 65704778 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947562.1
TGTCTTGTCAAAGACTGTTGTCTTATTCGCCACTGGGATAAGCGCTCGGATACTCGGGTTCTactattcatttttattttaacgTTTACGTTTGTATGTTGTTGTAAAATTGATGAAGTCAGGACTTAACGCATGAAGggggtGATGATGAATATGGAGACTCTGAGCAGGCCGGAGCTCCTGAAGCTCCTCAGCATCCTGGAGGGAGAACTGGAGGCACAAGACACAGTTATACACACCCTCAGAgcccAGCACAGGGACTCGTTCGTCCAGGAGCGCTATGGCCAGTATGACCTCAGTGACCCCTTCCTGGCCCTGCAGCGGGATAGCCATACCATGGATGACTGGTCCCCTTCAGACCCCCAGGGCAGCGTGGTGGGGCCCAACCCTCTGGCTGTGCTGAAGCTGGTCATGGCCCACTGCAAAAGGATGCAGGAGAGGATGATGGGACAGCTGGCAGCCGCAGAGAGCAGACACAGGAGGGTGATTGCAGATCTGGAGGAGGAGAAGCACCGACACGCACTAGAGTCGGCGCAGGATGAGGATGTCACCGTCAtgctggagaaggagagggagaaactactgcagcagTTGGAGGTGGAGCGTGCAGCAGTGCGTAGGCTgcagagggagcaggagagggcAGTAGGCCTGGCAGAGGAAACTCTGTCCCAGCAGCAGCAGTTGTCCTCAGACCTAACCCTGGAGCTCCAGAAAACCACCAGCCAGGCCCTGGAGGAGGCCCAGAGAGTCAGCCAGCTCCGCCTGCAACTCCAGGAGGAGAGCTGTACTTCAGAGAGCCTGAGGGGGGCCCTGGAAGCGGAGAAGGGCAGAGCAGCGCAGCTTGAGGCCAGAGCAGAGAGCCAGCTGGCTGAGTTTGACACAGAGAGGGAACAATTAAGAGCCAGGATCAgacgagaagaggagaggagcaaggggctggagagagaagtggaggagcTGAGGAGGAGGTTGGAGGcagcaggagaggaaggaatGGTTAGGAAGGTGCAGGAGACTGCGGTGAAGGAGGTGAAGGAGGTGAAACAGTCTCCTTCAAAGATAGCGTCAGCGGCGGCATTAGCAGCGGTGTCAGCGGCGGCGTCCACCTCGAGCCAGACAGAGCCTGATGGGAAGGCAAGCGTCGACCCTAAAGAGATCCCTGTCTCAAAGGTCAACGGGCATCATCCTAACCCTCCACGGGACACTGACCCCCCTCAGGAGGGCGGGGCTGTGGAGAACGGTGGGGTAGAGAGCGAGTCCGGAGCAagtcttccctcccctctccaccctcaCCCTCCTCACCCCCACTGCCACCCTCACCCCAACCTCTCCCCCTCCAGCACggcctcttcctccctctcctcctcccccatctcctcccccacGCTGGCTAAGCGTCTGGTCAGCCCCGGTGGCTTCCACACATCCTCCTACCAGGCTGGAGTCAACCAGCGCTTCCACGCCGCCAGGCATAAGTTCCAGGTGCAGGCTGAGCAGGAGCAGCTCCAGCAGGGTAGCACGGCTCCCCTCTCCCCCCGGGACCTGTCCCCTACCACcacccccatccctccaccctcagAGAACAGCACGGCCAAGCAGCTAGCCCGAAACACCGTCACCCAGGTCCTGTCCCGTTTCACCAGCCAGCAGGCAGGGGCCAAGCTCCCCCCACTAAACAGCTCTCCGTTTGGGACTGACTATCGAAGCCTGGCAGCCTCCCCTCCTGGGGGGAAGACCTCACCTGGAGGACCCCTGTCCCCAGGTATAcgctcacccctcacccctcggTCCGAGAGGTGCTACCCACCCCCCGTTCCTAAGAAACCGGGTATGAGCCCCTCTCCAGGCTCCCCCGACCCCCAAGCCGGGGCCAGCCTCTTCCCAGAGCTGACGGGGGGCTGTGGGCTAAGCAGCAGTGGACAGGAGGGGGCTAAGGAGCCAGACCTGGTACTCTCCTCCGGTAGCTAACAGCTAAGGGCCACGGCAGCTAGAaagtgatctaggatcagcataGCCTTCCCAAATCCTTCCCATCTTTAACCATTAGGGAGAAAACACAAAACGGACCTAGGATCAGTATCTGTGATCAGCTTTGTCTTATTCCTGCTGGAGGAGCCAGTGCTCTCCTCCAGCAGCTAGCAGCGTATGGCCTCCCTCATTCCAGATAGGCTAGTTTCTCTCTTCCATTTGCACTTGTTCACTCACTTTTAGGCCTGAGATTCAATCCGAGTGCTCTAGTCAACAATGCAGCTTTTAAAAGCAATGTTGCTGGGTTCAAATAGATCGCATTCAAGGTAAACGCTGCTGatgtcggctcaatcagaaatGACCTCAGAGACGGTAAAGAAAGCAAGACATCTCACAGGATCATGTTTTCTGGTCGGGCGGGTGGAGCGAGCGAGGGGATAAGTAGACCAGAGCCAGCTGTTGGTTAGTTGGTTAGTTTTGCATTGAAAACAAATTGTCACGGTTTCTGTCTGTGTAAGTGGGTGTTTCCTCTCTCACGTGACCATCTTTGAGCATGCTTTCCCGCGTGAGCTTATGTGGGAAAGCATGCTCACACAAGACaggaactttttttttaaatgtcaaatgGTAAACGGCCTTTTTAAGACATTTTcattatccaccatctttgattACCTTTAAATGTCTATCGGTTTAATGTGGGTCCACCGCGGTCTGGATTGGATCCTGGCCTTAATCTCCTGGATGTCCTGCAGCAGGCAGAACATGCCACTACTTATACCTCTGTAGGCCCTATTTTGACCACATAAATTAGCTGCTTAGTAGCAAATGAAAGCTCAAACACTACCTAGCAAACGGTCTGAAACACTGTCTAGTTCACATTAAATTACATTAAATCTATAATATACTGGGTTTTATTGGATTCATAAGATTTATTTTATTTGGAATTTATGGATAGTTTTTTTAATATCTTGATTTGTAATATATCTTTATACCTAGTTTATTGTATTCCATAGCCATGTTTAAAAGTGATCTTATTAATTATGCATTTAGTTATTCTAGGACATTAATTCATGAATCTCTCCGCCCAAGTCCACTCTGCAGTCTCGTCCAATACAAAGGCTGCATGGAGAGGGGAGTCTTTCCGTGGCAAGAGGATTCAAATGTAATCTGTTGATtgcacatgtacagttgaagaggtttacatacaccttagccaaatacatttaaactcagtttttcacaattcctgacgtttaatcctagtaaaaattccctgtcttaggtcagttaggatcaccacttta

Function

symbol description
cttnbp2nl Enables protein phosphatase 2A binding activity. Acts upstream of or within negative regulation of transmembrane transport; negative regulation of transporter activity; and protein dephosphorylation. Located in actin cytoskeleton.

NR:

description
CTTNBP2 N-terminal-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947562.1 True 3278 mRNA 0.53 5 65660280 65704778

Neighbor

gene id symbol gene type direction distance location
apeh apeh coding downstream 16139 65633130 ~ 65644141 (-)
tlr9 tlr9 coding downstream 31787 65623175 ~ 65628493 (-)
LOC110518541 LOC106566519 coding downstream 39988 65131650 ~ 65620292 (-)
wnt5a LOC106566524 coding downstream 530513 65094789 ~ 65129767 (-)
LOC110492545 lrtm1 coding downstream 668809 64984262 ~ 64991471 (-)
LOC110492562 LOC106568106 coding upstream 10933 65715711 ~ 65754610 (-)
ddx20 ddx20 coding upstream 564859 66269637 ~ 66276483 (-)
LOC110492566 LOC106566511 coding upstream 576178 66280956 ~ 66296439 (-)
b4galt3 b4galt3 coding upstream 598811 66303589 ~ 66308067 (-)
bgnb bgn coding upstream 615644 66320422 ~ 66345643 (-)
G1401378 NA non-coding downstream 5425 65654617 ~ 65654855 (-)
G1401376 capza1 non-coding downstream 6346 65648396 ~ 65653934 (-)
G1401611 NA non-coding downstream 43035 65616811 ~ 65617245 (-)
G1401606 NA non-coding downstream 55388 65604227 ~ 65604892 (-)
G1401596 NA non-coding downstream 83381 65576408 ~ 65576899 (-)
G1401632 NA non-coding upstream 969 65705747 ~ 65705961 (-)
G1401383 NA non-coding upstream 3847 65708625 ~ 65709149 (-)
G1401667 NA non-coding upstream 140559 65845337 ~ 65847509 (-)
G1401692 NA non-coding upstream 178448 65883226 ~ 65883433 (-)
G1401617 NA other downstream 23908 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 1211808 64445355 ~ 64485638 (-)
G1400578 NA other downstream 1349824 64309883 ~ 64310456 (-)
G1400565 LOC106575828 other downstream 1374287 64285628 ~ 64285993 (-)
G1400564 LOC106597321 other downstream 1375733 64284207 ~ 64284547 (-)
G1402686 srpk3 other upstream 720773 66425551 ~ 66426322 (-)
G1402707 LOC106566505 other upstream 780123 66484901 ~ 66494667 (-)
G1403498 NA other upstream 1738643 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 3086411 68791189 ~ 68795025 (-)

Expression


Co-expression Network