b4galt3 (b4galt3)


Basic Information

Item Value
gene id b4galt3
gene name b4galt3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 66303589 ~ 66308067 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566970.2
GAAgaccattgcaaaacagtgtttcAGTTATTTCGTGATGTGAAAATATTTAATATATTATCAAAAAAATCAAACTTTATCATGTTTGACTATTTTAATTAAGTCCTTCCCTTCCTCCACTGCTATATAATCACTTGTGTGTTTCACAATACAATCtcaacaagtgtgtgtgttttgtgcgtgcgtgtgtgagagataACACGGAGAGGGTTTCTGCACTCGAACATGTTCAATTTGCCCGGCAAAATACGTCATGTTCGCTTTGCCCCTCAACATGCCTGCCTGTCGTAGCGGCAGCGCTGTAGCCTACTGAGAACGGGGATGATAGATGAACCGCAGTTTATATGTTGATATCTGTTGGATGCTGCTGCAGCGACGGCCTTCCGTGTTTAGTCCATGCGGAAGAGTGCTTTCTAAACGGCTAATAGAGGATTTCGACCTGGATAAAATAGATTAGGAAGCGGACTCACCCAGAAACAGCTCCATCCACCCATACCATCGAATGTGTTGATCACAGGGCGGCCCAGTTGTCCTAAATCGAAGCCGGGGGCTAGATTTGGAACGTCGCAGGAACATGGAGGAActatgaggggaggaggagaaggagagagggagaacagactcTCTGCTGGAGGCCAGGTTCTGATATCATCCAGTTGGGACCACAGCAGAACACagTGACTCATCAGATGTTGAAGCGATGGCCGTGTGGACTGAGCTATAGCGCTGCAACATTCATACACATAGATGCCCCCCTCCTAACCCCCCGAGACCCCTACAGcctccccaccctccctctgtctctcctccatctctccttcctctgtcatccctctaccccctctgatCCCAGCCTCTTTCAGATCTAATTGTCTCTCactgtcttcttctctccttttctctgcatctctctttttctctccatcaccccccctctctctctccctccctccatcatggcGTGTTGTGGTCGCTCTCTTGACTCCCCCTGTACCCTGGCCCTATTGGTGGGCTTCCAGTTTGCCTTTGTGGTCTACTTCTCCCTGGGGGGCTTCAGGGGGCTGGTGTCCGTACTGGTCCACTCTGAGCAGCCTGAGTTTGACTACTCCCGCCCCCACGACGTGTACACCAACCTCAGCCACCTGGGGGTGCCACCAGCCCCCCACATAGGCACGGGGCCACCAGGGACAGGGGCTCAGCTGAAGGACTGCAAGATGCCCTCACCACTACTGGTCGGTCCTGTGTCTGTGCGTCTgtcctcgcctctctctctggaGGAGATCAGGGAGAGGAACCCGTTGGTGTTACCGGGAGGCCGGTACAGCCCCCCAGACTGCCAGCCGCGCCACCACACGGCCATCGTGGTGCCGTACCGTAACCGCCAGACTCACCTCCGAGCCCTACTCTACCACCTCCACCCCTTCCTACAGAGACAACAGATtcactacagtatctacatagtccaacagTGGGGTAACTCTACATTTAACCGGGCTAAGCTGTTGAATGTTGGGGTCCGTGAGGCGCTGAGAGACGAGGACTGGGGGTGTATCTTCCTACACGATGTAGATCTGCTGCCTGAAAATGACCATAACACCTACACCTGTCACAATCAGTTCCCCACACACCTCTCTGTTGCCATGGACAAGTTCAGatacagGTTGCCGTACCCCCAGTATTTTGGAGGGGTATCTGCGGTCACACCTGAGCAGTACATGAAGATGAACGGATTCCCCAACAGCTATTGGGGCTGGGGTGGGGAGGACGATGACATCGCTGCCAGAGTGCGTCTGTCTGGGATGAAGATAGTGCGCCCTCCAGTGGCCATCGGACATTACAAGATGATCAAGCATAAAGGAGACAGGGGCAATGAGCAGAATCCACGCagGTTTGACCTTCTGAAACGGACCAGGCTCAACTGGCATTCTGATGGTCTGAACTCTCTGACCTACGAACTGTTATCCAAAGAGCTGCAGCCTCTCTACACCAACCTGACGGTCGACATCGGGGACGACCCTCGTCTGCCCCAGAGAAAGGCCACGCCTCCTATGCCCAAACGTGAGGTGAAGGGGGATGAATTACCTCCCCTTGTACCATGGAGCAAACATGGATCAAAGAGGAGGGGAGACACACCCCTTGCAGCCAAACATGACATAAAGGGGGAGGGGCAAGCCGTTAAAGTGGGTGTGGTTACAGCTGTGACTACGGCTAAACCTAAAGCTGACAAGGTAGACCACGCCCAGTCAAAGACAGTGCATCAGACTGTAGATGAGAGGGCGAGTGTGGTAAAGTAGGAAGAAGGGCTGGAGATATGGGGTGCATCTCATTGGTCTAAAgctgccccctctcctcttctctcctgcatCTGAAAACACAGGATGGGTGTTAGCAATGTGGAGGATGTTACTGTCCTGTCCAGTTCTACCACATCAatgcagatgaaggaaaggacATGATGAGAGGAAGCCAGAGATGCACTGAGATGTACACTAAAATGACACACCTTATGTTCCTGGATTATCATAGGGTCCCCTATGAGGGGACCAGTAAAGCTAGCTATGTCCGTGAAACTGTAGATATTGTGAAGCATAGGGCTTAGGCTACAGCCAACTCAAAACCCTTCTGAATGTGACTCACCTGCGACAGTCAAGGTATTCAAACAACCtctccacccttcctctctcAGAAGACTACACCACCGTTATTACCAGTTGGTTTCattggttctcaaacctctcttTGGGGATCCCCAGACGTT

Function

symbol description
b4galt3 Predicted to enable galactosyltransferase activity. Predicted to be involved in galactosylceramide biosynthetic process and glycosylation. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in Golgi cisterna membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human B4GALT3 (beta-1,4-galactosyltransferase 3).

NR:

description
beta-1,4-galactosyltransferase 3

GO: NA

KEGG:

id description
K07968 B4GALT3; beta-1,4-galactosyltransferase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566970.2 True 2758 mRNA 0.52 8 66303589 66308067

Neighbor

gene id symbol gene type direction distance location
LOC110492566 LOC106566511 coding downstream 7150 66280956 ~ 66296439 (-)
ddx20 ddx20 coding downstream 27106 66269637 ~ 66276483 (-)
LOC110492562 LOC106568106 coding downstream 562813 65715711 ~ 65754610 (-)
cttnbp2nlb cttnbp2nl coding downstream 598811 65660280 ~ 65704778 (-)
apeh apeh coding downstream 659448 65633130 ~ 65644141 (-)
bgnb bgn coding upstream 12355 66320422 ~ 66345643 (-)
si:dkey-32e6.6 LOC106566508 coding upstream 73936 66382003 ~ 66421064 (-)
tsr2 tsr2 coding upstream 125881 66433948 ~ 66436902 (-)
cdk16 cdk16 coding upstream 143025 66442214 ~ 66479142 (-)
abt1 abt1 coding upstream 193965 66502032 ~ 66503955 (-)
G1402620 NA non-coding downstream 2072 66299646 ~ 66301517 (-)
G1402588 NA non-coding downstream 97349 66205628 ~ 66206240 (-)
G1402585 NA non-coding downstream 102086 66201159 ~ 66201503 (-)
G1402550 NA non-coding downstream 154615 66148637 ~ 66148974 (-)
G1402492 NA non-coding downstream 258189 66045024 ~ 66045400 (-)
G1402659 NA non-coding upstream 51374 66359441 ~ 66376840 (-)
G1402707 LOC106566505 non-coding upstream 182590 66484901 ~ 66494667 (-)
G1402728 NA non-coding upstream 216659 66524726 ~ 66525092 (-)
G1402731 LOC106566502 non-coding upstream 223289 66531356 ~ 66531965 (-)
G1401617 NA other downstream 667217 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 1855117 64445355 ~ 64485638 (-)
G1400578 NA other downstream 1993133 64309883 ~ 64310456 (-)
G1400565 LOC106575828 other downstream 2017596 64285628 ~ 64285993 (-)
G1402686 srpk3 other upstream 117484 66425551 ~ 66426322 (-)
G1403498 NA other upstream 1135354 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 2483122 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 2895219 69203286 ~ 69207158 (-)

Expression


Co-expression Network