grm6a (LOC106566502)


Basic Information

Item Value
gene id grm6a
gene name LOC106566502
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 66524736 ~ 66565764 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947584.1
gagagagaaagagatagagagaaagaaagagcgagagaaagagagagagagaaagaaagaaagagcgaaagagagagagagagagaccatcctTTTAAATTTGATAGTGATTTGAAGCGTCACAGTTGTGGGGAATACGGCACATTTTAGTGTGATGCAATTTCAAAAGCCTCGAAAGCAACTTATAAAGACTTTAATCCAATTAATGACACATTGTTTTCAGAGCTATTCGTCACAAGCAAGTATCGTTCTTGATGTTTGATATAGTTTAATCGATGACAACCGCAAATTGCTTTCGGAGAGTGTGAAAATGTGAAATATTTTGTTGAGGCTGATCTGCGTTTTGGAATGTTTCAATGACTGCGTATTTTTAGGAGCAAGTTCAAGAAACATCAAGATGGAATTTCCAGCAGGTGCTTCAAGTAGAGGGTAAAGACACGTGCCAATAAAGTCATAGCATCATGACATCTAAATCCCCCCCATCTCTACACTACCACCACCAGTATGGCATGGTTTGGCCATTTGGATGGGGTGGCTGTCATTCCACCACGTGGCCTCGCCTCCTATGGATGTTGTGTGTGGGGATGAGCCCTGGGTCCTGGGCCTCCCATCAACACTTCCATCCCCACTCCATCAAGATCCCTGGAGACATCACCCTTGGAGGCCTGTTCCCCATCCACGCCAGGGGGCCTCATGGCCTGCCCTGTGGGGAGATCAAGAAGGAGAAAGGCATTCACCGCATGGAGGCTATGCTCTACGCCCTGGACCAGATCAACAGTGACCCGGAGCTACTCCCCAACATTACTCTGGGGGCCAGGATCCTGGACACATGCTCTAGAGACACCTACGCCCTGGAACAGTCGCTCACCTTCGTCCAGGCCCTCATCCAGAAGGACACCTCGGACATACGCTGCTCCAATGGAGAGCCGCCCATCATCCGCAAGCCTGAGCGTGTGATAGGGGTGATCGGGGCATCAGCCAGCTCTGTGTCCATCATGGTTGCCAACGTGCTGCGTCTATTTGAGATTCCCCAGATCAGCTATGCCTCCACAGCCCCAGAGTTGAGTGACAATAACCGCTACGACTTCTTCTCGCGTGTGGTCCCTCCTGACTCGTACCAGGCCCAGGCTATGGTGGACATAGTCAAGGCAATGGGCTGGAACTATGTGTCTACACTGGCATCAGAGGGAAGCTACGGGGAGAGTGGAGTTGATTCCTTCCAGCAGATCTCGAGAGAGGCAGGAGGTCTGTGCATCGCACAGTCTCTTAAGATCCCACGGGAGCCCAAGCCGGGAGAGTTTGACAAGATCATTAAAAGGCTGATGGAAACTTCCAATGCCCGGGGGGTCATCATCTTTGCAAATGAGGATGACATCAAacgggTTCTGGAGGCAGCGAAGAGGGCCAACCTCACGGGTCACTTCCTGTTTGTAGGTTCTGACAGCTGGGGTGCCAAGAGCTCCCCTATTCTAGACCAGGAGGACGTGGCTGAGGGAGCTGTCACCATTCTACCCAAGAGAGCCTCTATTGAAGGCTTCGACCAGTACTTCACCTCCAGATCGTTAGAGAACAACCGTAGAAACATTTGGTTCGCTGAGTTCTGGGAGGACGATTTCAGGTGTAAACTGACAAGGCCAGGCATCAAAATAGACAGCGAAAAGAAAAAGTGTACAGgagaggagaggataaatcGTGACACTGCCTATGAGCAGGAGGGGAAGGTGCAGTTTGTAATCGATGCGGTCTACGCCATGGCCCATGCCTTGCACAGCATGCACCTGGACCTGTGCCCCGGCGCCATGGGCGTCTGTGACAAGATGGATCCTGTGGAGGGCCGGTTGCTGCTCAACTATATTCGTTCTGTGAACTTTAACGGCAGCGCAGGGACAGGAGTTCTATTCAATGAGAATGGAGATGCACCAGGACGATATGACATCTTCCAGTACCAGATGTCAAACACTACCATTCCTGGATACAGAGTCATAGGTCAATGGACCAACAATCTGCGACTCAATatgGAGGAGATGCAGTGGTCAGGTGGAGACCGTCAGATCCCTGACTCAGTGTGCAGTTTCCCCTGTAACcctggagagaggaagaagatggTGAAGGGTGTGCCCTGCTGCTGGCACTGTGAGCTGTGTGACGGCTACCAATACCAGCAGGATGAGATGACCTGTGAGACCTGCCCCTTCAACATGCGCCCTACGCCTAACCGGACGAGCTGCCGGTCCACGCCCATCATCAAGCTGGAGTGGCACTCCCCCTGGGCCATCATCCCTGTGTTCCTGGCCATCCTGGGTATCCTGGCCACCTCCTTTGTTGTCATCACCTTCATCCGCTTCAACGACACGCCCATCGTCCGCGCCTCTGGCCGGGAGCTCAGCTACGTCCTCCTCACGGGCATCTTTCTCATCTACCTCATCACTTTCCTCATGATCGCAGAGCCAGGCGCAGTGGTGTGTGCGTTCCGCCGGCTGCTGCTAGGCCTGGGCATGGCCATCACCTACTCCGCCATGCTCACCAAGACCAACCGCATCTACCGCATCTTTGAGCAGGGCAAGAAGTCTGTGTCGCCACCTAAGTTCATCAGCCCCACCTCTCAGCTGGCCATCACGTTCATCCTCATGTCTGTACAGCTGCTAGGGGTGTTTGTCTGGTTCGCTGTGATACCACCCCATACCATCATAGACTACGAGGAGCAGAGGCCTCCCAACCCGGAGATGGCCCGGGGCGTCCTCAAGTGTGACATGTCCGACCTGTCGCTAATCTGCTGCCTGAGCTACAGCATTGTCCTCATGGTGACCTGCACTGTCTACGCAGTCAAGAGCAGAGGGGTACCGGAGACCTTTAACGAGGCCAAGCCCATCGGCTTCACCATGTACACCACATGCATTGTCTGGCTAGCTTTTGTGCCCATCTTTTTTGGCACGGCACAGTCCACAGAGAAGATGTTCATCCAGACCACCACGTTGACAGTCTCCATGAGCCTGAGTGCCTCTGTGTCTCTGGGGATGCTCTACATACCCAAGGTCTATGTCATCATCTTCCACCCAGAGCAGAACGTACAGAAAAGAAAGCGCAGCTTCAAGGCCGTTGTGCAGGCAGCCACCATGTCTACTCGGCTCTCCCAGAAGTCCAACGACAAGCAGAACGGAGAGACGCAGAACAAGATCGAGCCAGACAGAACACAGTAACTGAAGTGTGGCCAATAATTTATCCAGAGGACCTACATTTCACTAAGGAGCAGGAGATGTTATTGAAGGCCATGCAGTAGGGAGAGGAGGCCTGTCTTTAACAGTAACTAGGTACTTCACTGGTCCACTGGATGTCAATGGAATGAAACTGCAACAAGGAAGTGTTACACCACTTCAACAAGAACTAGAATGAACTTAAACTGGTGTCAAAATGTTAAAGACTTCCAAAAGCCCACATTAAAAATGGGAGGGGGTGGAGTCAAACTGTACCCATCCGTTATCAACCAGTTAGATTTACAGCATCACAACGATCATCACATTGAAACACATCTGGATACTGAGACACAGCAAACAACAAGAGGTGTGGACCAAGGCCACCACAATGTGAGACTGATAATGTACTTTTCTCAGTATTGTGCTGTTTTAATCTCTTTGCTCGCGGTTCTATTACCTTGACATTCAAACTTGCTCCAGAGGACATGTTGTCTCCATTGGATCAGTTGTATGCTTTGTTCATCAACATATCAACATGAGTTGTTTTTGTGTGAATATTTTTGTCCATAGAAATCTACagtggagcgctgcagagatgctCAGACACTGCAATAAATGACACAGATGCCCCAGTTAGAAactgacctaaatgacagtgaactATTTTGTAGTGAACCACATGCAGTGATACTATTTGGCTTTGTTTGCTTAATTTCAAACTTAACTTAGGTTATACGTTGTTTGAGATGCCCCAACAATATTTTGCCCCTGTTATTTTGTCTCCTTACTGTATGTATGTGGAAGTAATGTACAAAGCTGTAGTGTAGACTGTACCTGGATCAATATAGTTATTTATCAACTCATTCAATAAACCGTGTTGATTTTTATTCATCTTTATATCCTTATTTTCCCTGATTTACTTTCATTTAGACGCTTTTCTTCTTCACGTTTGCACTTTTTAACACCTTATCCAAAGATTTACTGATGTTTTCTCACAAAAGGCCCAAATGTTGTTCACAGGATGATCTATTATAAGGTCGTATCTACAGAGTAACCAATTTGTATTCATACTGTACAATTTAAAGTACAGAATGGATTTTCATTCTCTCCCTCATCCAGTCCATAACTACAGTGTTATTTTTTAAAGGGAAATCCTAAaattaattttttatttgtacACCTCTCATGGTTCCTTGGGCATTTTTGCATGTGCACAGAATAAAATCTGACATTTTTATATGATAAAGTATACACATTATAGACTTGATTCAGATAATGATGTCAATAGGGTGTTTATAAAGGTCATGGCAAAAACATGTCTGACTTATGTCTGaattcaatgtactgtatgtgtgatgcAGATGAGAGCATGCCTATGATCTTCATGTCTTTAAGCACAAAGACTCCCCATCACAGAAAGCTAATGAAGGGAAAGCAGCCATTCCTAATATCCGGTGGGTTCCCATGTATTGTCAAATCATATCAGCACTGATATAGAGCACAGCACAGCTTCATTTTCAGTTAAAGTTGTCATAAATTATTTGTGGTGGAACATTGTGTTTTTGCATATATGGTGATCACAGATGACAAAAGTATTGCTTGTATAGTGGCATCTAAATTTAATCTCAACATAATTGACAAGGAAGCAATGCGTATTGTTGATGACAGGACATCTATTTATCAGAAAAAGGGTTCTCTCCCATGACCAGAAGTAACAAAGTACTGTACATGTAATTTTGGCACATACACTTTAGACATGAGGCACACTGAATATCTGGGTGAATATTCACAATATTTTACCCGACAGAATAGTTCACTGTACCCATGTGGTGGTTAACAGAATCCATGACATTGATACATTATCATGGCGACTACTTCTGGGATTGGCAGAAGGTCTTACAGACATAACTTATATTAAAGCACAACAACCGATAACAAAAAATAAAAGAGGTTCATAATGTGTGGAGAAGCAGCTTCAATTACATTTTGCTTTAAGCCTTTAATAGCTCATGCAATTAGTGCATTAAAACAAACAACAAGGAAATGTTGTATACATTAAAGTTTTTCTGCTCTCTACATATAGTGTCAAGTATGGCATAAGAATAGAATACAAGTAGAAACCATCTTGATTGTGGCAAGTTTCATTGTTTATGTCATGCTTTATGCATGGTGCTATCACCTATTATTTATCAATACGTTTCAATTAGGTTATGCCACAATACCATTAGTGATTCCAAATAAAGCATTAGGAAGAACCACTTAGTTGTTTATACATGCAAAGACTACAATGTCCTCCTCTACACGAAACTCAGGTGTTTTATTTTGCATTTGGATAAAGGACAATCTCTCATTGTAAATGTCACACTCTGTATGGGTAGTTCCTATTTGTAAAGAAAGCTGTTTCCTTAGGACAGATACAAGGCATAAAGGTATTATGTTCAATATATGCctatgacttgcctagttaaataaaggtcaaataaaaaatctaataaaaaatgCCTATGATGATGCATGTTGGAATAAATGTTTTAAT

Function

NR:

description
PREDICTED: metabotropic glutamate receptor 6-like

GO:

id name namespace
GO:0007196 adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0001642 group III metabotropic glutamate receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947584.1 True 5727 mRNA 0.45 12 66524736 66565764

Neighbor

gene id symbol gene type direction distance location
comta LOC106566505 coding upstream 30051 66477277 ~ 66494685 (+)
srpk3 srpk3 coding upstream 89825 66423889 ~ 66434911 (+)
LOC110492564 LOC102303593 coding upstream 259637 65996027 ~ 66267216 (+)
capza1b capza1 coding upstream 870799 65648356 ~ 65653937 (+)
cacna2d3a LOC102307471 coding upstream 1488453 64722542 ~ 65037527 (+)
usp11 usp11 coding downstream 3712 66569476 ~ 66582944 (+)
uxt uxt coding downstream 31873 66597637 ~ 66599559 (+)
elk1 LOC106566498 coding downstream 34198 66599962 ~ 66621991 (+)
si:ch211-180f4.1 LOC106566497 coding downstream 74469 66640233 ~ 66653854 (+)
otud5a otud5 coding downstream 93245 66659009 ~ 66683358 (+)
G1402054 NA non-coding upstream 7037 66514792 ~ 66517699 (+)
G1402026 NA non-coding upstream 69814 66448747 ~ 66454922 (+)
G1401993 NA non-coding upstream 130450 66393896 ~ 66394286 (+)
G1401946 NA non-coding upstream 202148 66320424 ~ 66322588 (+)
G1401952 NA non-coding upstream 211190 66313205 ~ 66313546 (+)
G1402092 NA non-coding downstream 29803 66595567 ~ 66596205 (+)
G1402098 NA non-coding downstream 61800 66627564 ~ 66627883 (+)
G1402099 NA non-coding downstream 63371 66629135 ~ 66629342 (+)
G1402113 NA non-coding downstream 89959 66655723 ~ 66656284 (+)
G1401782 NA other upstream 500491 66019001 ~ 66024245 (+)
G1401354 NA other upstream 627673 65895891 ~ 65897063 (+)
G1401074 NA other upstream 1265892 65258515 ~ 65258844 (+)
G1401041 NA other upstream 1334461 65189990 ~ 65190275 (+)
G1400202 LOC106566541 other upstream 2050448 64473548 ~ 64476421 (+)
G1402256 NA other downstream 348601 66914365 ~ 66914716 (+)
LOC110492593 LOC105017353 other downstream 906180 67459278 ~ 67476876 (+)
G1403412 LOC106566473 other downstream 1087304 67653068 ~ 67653447 (+)
G1403463 NA other downstream 1173198 67738962 ~ 67739702 (+)
G1403655 LOC106566486 other downstream 1207792 67773293 ~ 67777491 (+)

Expression


Co-expression Network