slc6a8 (slc6a8)


Basic Information

Item Value
gene id slc6a8
gene name slc6a8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 66738326 ~ 66767036 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566996.2
CAGGCTCAGTTAATTGTCATACAGTGCACCAAGAGAGAGCAGCTAAGGATAACCGCGATAGACCTATCATATTGTCAGTATTTTTCCGAAGCGAAGGAAGCCAAGGAGCAGGATGATCTAGCCTCGGAATCTAAAGACAAAACCACGAATGTAATTCCGTTACATTCGTCATCGAGCGCGCGCAAAGCCCGCTGAGTTTTTCGCCTCGACACCCGTCTCCTCTTTGAGAGATAAGTTCCCATGCGATTCTTCAGACTCACATTCAAGTGTTTCGTAGATTGTTTTTGAAGGTGCTCTCAAATTCGGTGATTTTCTTTGGGGGCAAGTGTCCTTTATTTTTATACACCTCAAATGTAATAAACATTTAATTCTGATCTCCGTCTCATCGTTGCGCGTTTGACATTGCTATACGATAATAGAGATACAAATTATACCTATTCAAGTGACTTATCATACCCTTAAATTAAAAAGGGGAAATAAATCAGATCCTATTCCCATAGGATTGCCAGAAGAAGAACAAAGGACCATCTTCGGGTCCAGGGAAATCGACCCGAACGAATAAAAGCTTAAGAAAGCTGTATCTATTGTCCTGAATCTTCACCGATCTTTTCACTGGTTTCCTCCTCAGTGTTAGTGGGAAATTGAGGGTGCATTGTTTACAAGTGCGTAATTGGCATGGAGAAACCTGCATTCGAAACTGACTGCTGTGCTGTGAACGTGGTCCTCGGGGAGGAGAAAAAGGGTCACCTCATTCCGAACGGAAACGGGCACCAAGCTGGCGTGAACGGAAGCCTCATTGGTGGAACTGACGGGGCAGGATGCGGAGCCACACCTGGCACGATGTCGTCAGTGGAGAAACCAGTGCCAGGGTATCCCGAACGAGAGCAATGGACCAGACAGATGGATTTTATCATGTCCTGCGTCGGCTTCGCTGTAGGGCTGGGAAACGTCTGGCGCTTCCCTTACCTATGCTACAAAAATGGTGGAGGAGTGTTTCTGATTCCCTACCTCATTATTGGGGTTGTTGGGGGAATTCCTATATTCTTCCTGGAGATTGCATTGGGACAGTTTATGAAGGCTGGCAGCATCAACGTGTGGAACATCGCACCTCTATTTAAAGGACTGGGGTATGCCTCCATGGTCATAGTGTTCTTCTGTAACACCTACTACATCATGGTCCTAGCCTGGGCCTTCTACTATTTCATCAAGTCCTTCAATGCTACCCTGCCCTGGTCCACCTGTGACAACCCCTGGAACACGCCCAGCTGCATCGAGATCTTTCATCATGAAGACTGCCTGAATGGCACCATTGGCAACACTACCTATGGCAACATGACATGTGAGGAGCTGGCAGATGGGCGTTCTCCCATTATTGAATTCTGGGAGAACAAGGTGCTGAACATCTCACAAGGGCTGGACTACCCAGGATCCATCAACTGGGAGCTGTTGCTGTGCCTGGCGGCCGTCTGGGTGAtggtgtatttctgtgtgtggaagGGAGTGAAGTCCACAGGCAAGATTGTGTATTTTACTGCCACGTTCCCCTACGTCGTCCTGATCATCCTTCTGGTGAGAGGGGTGACTCTTCCTGGTGCCTACGATGGAATCATGTTCTACATCAAGCCTGACTGGTCCAAGCTTGGCGAGGCGCAGGTGTGGATTGATGCTGGCACACAAATCTTCTTCTCTTATGCTATTGGGCTTGGAGCTCTCACTGCCCTAGGCAGCTACAACAGATTCAACAATGACTGCTACAAGGATGCCTTCATGCTAGCTCTAATCAACAGTGGCACCAGTTTCTTTGCTGGCTTTGTGGTGTTCGCCATTCTAGGCTTCATGGCAAACGAGCAGGGAGTGGACATCTCCCAAGTGGCTGAAACAGGTCCTGGCTTGGCCTTTATTGCGTATCCTAAAGCTGTGACTCTGATGCCAATGCCCCCGGTCTGGGCTGCTCTCTTCTTCTTTATGCTGCTCGTACTGGGTCTTGACAGTCAGTTTGTTGGAGTGGAAGGTTTTGTAACTGGGATTCTAGATCTCTTTCCTGGAAAGTATTACATGCGCTATAAGCGTGAAATCTCTGTGGCAATCTGCTGTTTAATGTGCTTTATTATAGATCTCTCCATGGTTACACAGGGAGGGATGTATGTCTTCCAGCTTTTTGATTATTACTCCGCCAGCGGTATGACCCTGTTATGGCAAGCATTCTGGGAATGCATAGTTGTCAGCTGGGTCTACGGTGCTGACAGGTTCATGGATGACATTGCTCGTATGATTGGTTACCGGCCTTTTCCTTGGATGAAGTGGTGCTGGTCGTTTATTACTCCATGTGTTTGCATGGGTATCTTCCTATTTCACCTGTTCAACTACAAGCCTCTTACCTACAACAATACGTATGTGTACCCATGGTGGGGTGAGGTGATTGGTTGGTGCATGGCTCTGATGTCCATGCTCTGTATCCCTGTCAGCGTGTTGTACAAGCTCTGCAGGGCCACGGGAACCTTCAAGGAGCGTTGGGAGAAGCTGACCAAACCACAATGGGGTCCCCATCACCTTGAATACATGGCGCCTGATACTGACATAAAGAGCTTGGCCTCCCTCTCTGCCAGCACAGAAGACAACAAGGTTATCATCTTTGAAAGTGGtatgtaggctatagcctacaggAAAGCCTTTGACAACACTCTAAAGACCAGATGATAATTTATGTAATAATTGATGTATTCATTTGGGTTAATGACACAATCAAAAAGGAATCGCCTGGTAATTATGTGCAATTAATTAGAGGATGCAGATAATGTACACAGACGGTTCTCTACACCTATACAAAATCAATTCACAACGGTCTATTGGACAGTCGATAATCTTCACCTGGGATGTTGATAATCAATGTCCTGATTGGTCCATTCTATAAACAGGTGCCGTATAGTCTTTGGGGGGGGGTGATCTGATACCCAaactgtccctccctgtctgtgaCTCCATCAGGCCAGAGCCATAGTCTACCAATGTGTAGCCCACCACCTCACCCAGTATGGCAGAATTTTTACAGGCTATCTTTAAGACTGATATGGAATTCCTTGAAATTACACATTACTGCAAGACCAATCATGTGGTACGGAGGGTTTGTGTATCAACCGGTGTAGTTAAAGATATCTTGCATAAAAATCTATTTGGCTAATTTGATACATGAAAATATATGTATTACACATTGAGAGTAAGCATTTCagggtaaggtctactacacctgttgtattcggcgcatgtgacaaataaagtttgatttgatatatgaATATATAATTAAAAGCATTTGTTCAATTGATATtatatcatatactgtataatacactACAGTTTGTCGGTTTGGCTGAGTTGATACATAAAATACAGAATTCTTTCCAATTGACTTCAATATTCTGGCTTCTTTAGGCCCCTGAAGTTATGTAGTTGCCAAACTGTAAAAATGACCATCTTTGATCATTGAGCTTGTGTAATGTGTCTTTCATGGTGACAATAGTCCTCAGAACTTTAGACATAaactaaagattgattcagtgcCAAAATGGAGCATACTTGTCATTCTCTTGTTATTGATAGAGAATGGTTTTGGTTGCCATATACACTATCTATGTTTATTTGCCTAGATCAGTCTGATATATATTGTGTCTTCCGATTTAACTGTCTGATGTTTGGGAACATCTTGAAAGCAAACAATGCAGCTCTTACTCATGAAGCAGTTTAGATGCCTTGAAACATTTTCATTGATAAGTGTGTCTacagatatatatttttgaatCAACAATAATCACTAAATTGAACTGTTCTGTAAGATCTAAGATCACTCTTCTCTAATTCAAAAAGGTGACTGGCTGATATATTGTTCGTAATGGCCATTAAAAACAAATGATCCGATACTTCCTCTGGCATTAACTTGCAAAATGATCACTTGGCCAAGTGGTAAGGATTTACCTCATATTTCAACCAACCTATTGTTACGAAGACAAGTACATCTCTGCAGCATGTAGGAGGACAGTATTTGGATCTAACTACAACATTGCCACAACAAGTAGCTGCTGTGCCAtttgccagtgactggaacaggGTGATGAGTAACTAACTGTAAGGTGTTATATCGTGAGTTTACCTCTTgagtattacacacacacacagtattaatGTTGCAGCCGTACAGGAGCTGGACACGTAGATCATTGCCTTATGTTGTTTGTCTTAAATCTAGAGCCCATATGTCAACTCTGACTAGCCATATTCTTACCTGGTCCACTGAGGAACAGTCTTGAAGATAACCAAATGGAAATTCTGCCATTTACCATGATATGGATAACATATGATTTATTTCGATATTGAAAAGATCATtagaatgtaaaatatattaaataatgCAATGCTAAAAACTACATTTGCACATTGTAAAATATCTCGCtagcactttaaaaaaaaatcgtgTTAGAATAacaatttttgttttgttttacatattGTAAAATAAATCAGAGATTTTATTTTGTGAAGGCTTTTATTTTgcttatacatacagtataaaaaaatatattgaatatCTTGTGTGTTATATTTTAAAGAGTTTGATGCAGTATGTAATTTTGATGAAGATTTCTAAGGGGAAGAGCATGCGCCATTGAGATGCTGCGATGCAGTACTCCTCAAAAGGCTTGTGTGATTCATAACACACAGAAGGGATTTTTGGTTTCAAATATCAAGTGCTCCAGTGTTAAGTAGCCTAATagattatttgtgtgtgtttaattaCAGTATTTCCCTCAGACCACCCAGAGCTCAGTTAAACGTTAATATTTCTCAGAAAGACCTTCTAATTTGGTCCACACAACACAGGAGGATTCATTTGATTAAGAATTAAAagattttggaatatttttttactTGGGATTTCATCATTTTCAACATATTTCACGTCTGGCTTCAAGTGTAATTTATGTTCTCTACTTAGAAGCAGTGTGCTCTCAtttgtaaaaaattaaataaaaataataatcattAAGATTAAAAGGTCCTTTTTGTGGCAGATATTACAGAATTTGACAAGAAAACTAAACTCTCTTTCTGTATATGCCTATTGACTATCTGCCACGGTCCTCCTACACTAAACCTGGCATATAGAAAATACTCTAATGCTCTCCCACCTTTCAAAATTGAAAACCGCATGGTAAAAGTGGTGAGTTTGGTTGTTGGTTATGAAACCTTGAGACAGAACAAACATTCCCTCCTAAATGTAGTGCTAGAACTAAATGCGCCTTTCATACTGTTGGTTTATGGACATATGTAAGGATGAGGACACAAGGAAGTTTTATAGCAAGGCTATGGTCAAATAAATGTTAAAGTTAAGAATCTATTTTAACAACATTTTTTTACATTGGCCTTCCTTATAATACTCATAGATTATAGCCTGGGTTGGTCGAAAGGTGAAACATTTAAACGTAGTCATTAAATGTAGAAAATCTAAATGAAATATACATAAGCAAAATCATATGTATGGTGTCATCTTTTGCGCTCTGCCAAATTATTCTTGACAGTATCTTTAATCCAAAGTATGACTCACAAAGGGGAAGTGTTGAATTGATAATGAAAGCTTTGTGGATCTATtccatatcatacgaaatggtcAAAAATGTAATAGATATGAAAAAATACTCATTCCCCGTTGCTGAATATGATTTGTTTATTTTAAAATCTACATGAAGTCTTTTAAAATGTTCTGTTTATTTTCATAAACTATACAGACCAATTACCATAGTTACCATGGAATATGTTGTACTGTAATGATTGTATACAGTACATTAAACTGGAATATCCATCATTAGCTGATAAAGACTAACGCTAACCAACTATGCAAAGCTGTAAAGAAACACTTGTTGCGACAGTTGACAGTTGAATAGTTCTTATGGCATCTGCTGTATGATTGACAGTGAACAGATAGTAGTGCGAATGGGGCCACAACTCTCCCCTACACAGctatctctcttcctcatcccctctcctttTCCACAATGTCATTTTGAGTTTTGTTTTCACAAATCCTACACAAAGGCCTGGAAAGAAGGGTACAATCAAGCCTGAGAAAATGGTATTTCATCATCCACTGAGTACTTTGGCAAAGGATACTGTCTTGAAAAAAGATATAGTAACACTGTTGACTTCATCTAACTGTTATTGTACTCTGTATCATGTAAGATTTAACATCAGTCTTCCATTCATAACATAGAATAGTGATAAAGAGATGACTGTAAACCTATGTTGACATCCCAAGTGTTCCATCAACCTTGTCCCTCACAATTTATGAAGGGATTCATGCTTAATACCACTGTGATTCTGTGCTAAAAATCCACTCGCCCTATTCAAAATAACAAAATGGCAATAAAACTTACTTCAATAAAAA

Function

symbol description
slc6a8 Predicted to enable symporter activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including digestive system; eye; heart; optic vesicle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in creatine transporter deficiency and intellectual disability. Orthologous to human SLC6A8 (solute carrier family 6 member 8).

NR:

description
sodium- and chloride-dependent creatine transporter 1-like

GO:

id name namespace
GO:0006836 neurotransmitter transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005328 neurotransmitter molecular_function

KEGG:

id description
K05041 SLC6A8, CT1; solute carrier family 6 (neurotransmitter transporter, creatine) member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566996.2 True 6433 mRNA 0.40 13 66738326 66767036

Neighbor

gene id symbol gene type direction distance location
LOC118939570 NA coding downstream 32070 66698638 ~ 66706256 (-)
zgc:86609 LOC106566500 coding downstream 151271 66583103 ~ 66587055 (-)
abt1 abt1 coding downstream 234371 66502032 ~ 66503955 (-)
cdk16 cdk16 coding downstream 259184 66442214 ~ 66479142 (-)
tsr2 tsr2 coding downstream 301424 66433948 ~ 66436902 (-)
LOC110492586 LOC106566493 coding upstream 55298 66822334 ~ 67012161 (-)
LOC110492588 LOC106566492 coding upstream 254899 67021935 ~ 67033045 (-)
LOC110492592 LOC106566478 coding upstream 704908 67471944 ~ 67492651 (-)
LOC110492594 LOC106566480 coding upstream 732629 67499665 ~ 67510144 (-)
LOC110492595 LOC106566479 coding upstream 745462 67512498 ~ 67571087 (-)
G1402855 NA non-coding downstream 1645 66736370 ~ 66736681 (-)
G1402751 NA non-coding downstream 10674 66726763 ~ 66727652 (-)
G1402750 pim1 non-coding downstream 50251 66684891 ~ 66688075 (-)
G1402821 NA non-coding downstream 83581 66654107 ~ 66654745 (-)
G1402888 NA non-coding upstream 30109 66797145 ~ 66797353 (-)
G1402906 NA non-coding upstream 51985 66819021 ~ 66819255 (-)
G1402914 NA non-coding upstream 63665 66830701 ~ 66830945 (-)
G1402916 NA non-coding upstream 68758 66835794 ~ 66836024 (-)
G1402707 LOC106566505 other downstream 243659 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 312004 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 983716 65715711 ~ 65754610 (-)
G1401617 NA other downstream 1101954 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 2289854 64445355 ~ 64485638 (-)
G1403498 NA other upstream 676385 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 2024153 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 2436250 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 2510791 69277827 ~ 69280359 (-)
G1405172 NA other upstream 2750719 69517755 ~ 69518113 (-)

Expression


Co-expression Network