LOC110491164 (LOC106566465)


Basic Information

Item Value
gene id LOC110491164
gene name LOC106566465
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68348773 ~ 68357169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564513.2
TTTTCAAAGGGGTCCAGTCACCCATGAATGAGCAGGCAACGGTACTTGTTAACAGACTCACAGACCTGCCTATGGGACTGCAGCCACAGGACGCAGAGAGAGACAAGTTCCCCAAGCTTCAGCATCCCACCACAGATTGGGCAACTTCTTCTTCTCTACTAAATTAACTTCTGCTGAGGGGGCCTCATTTTGACACCGTCTCCTGCAGTGATCAAAGCTGGGAAGTTCTGGAATTTAGAAGAAAAGCTACTTTTCAGGCTACTGCTCTCAAGATGAATCCCTCTATTTCACTGGTGGTACTATTGACTGTGTGGGCTTCCGATGCGAAAAAATTTCCACAGACAAACAGTGCATCTCTTGAAAAGGATATGTTAAATCTCGACATTCAAGTCATTCAAAGCCATGGTTATGACAATGAGGATGTGAAAGGACTGGAATGGGACAAGCACCACAAGAGAGCACCGCGGGGTGCAGACGACGAGGACACAGGCGCAGGTGAACCTCAGTCTACCTTCTCACGGTCTTATGAGAACGAGTTCACCTCACCCAGAGCTACCCAGTTCTCTAGCTCAACCCTGGAAACTGGGGCCAACACAGACTCAACTCTGGAAACTGGGGCCAACACAGACTCAACCCTGGAAACTGGGGCCAACACAGACTCAACCCTGGAAACTGGGGCCAACACAGACTCAACCCTGGAAACTGAGGCCAACACAGCCTCAACCCTGGAAACTGGGGCCAACACAGACTCAACCCTGGAAACTGGGGCCAACACAGACTCAACCCTGGACACTGGGGCCAACACAGACTCAACCCTGGACACTGGGGCCAACACAGACTCAACCCTGGATACTGGGGCCAACACAGACTCAAATCTGAACACTAGGGCCAACACAGACTCAAGCCTGGACACTGGGGCCAACACAGACTCAACCCTGGACACTAGGGCCACTGGGGCCAACACAGACGTGGATCAGGGCAACAGCAGCACTACAGGAAGGTGGATCACCAACATCCACAACCCTCTGTACCCAGTGACTGACAGTTCTTACACTGCCTACGCTGTCATGTTCCTGTCcctggtggtgttctctgtggGGATTATAGGGAACCTGGCTGTGATGTGCATCGTCTGGCACAACTACTACATGAGGAGTACCTGGAACTACATCCTGGCCAGCCTGGCTTTTTGGGACTTCCTGGTGCTCTGCTTCTGTTTACCTGTGGTGGTCTTCAATGAGCTCACCAATAAGAGGCTGCTGGGGGACATCTCATGCAGAGCGGTACCATATATGGAGGTGACCTCCCTAGGGGTGACATCCTTCAGCCTGTGTGCCCTGGGTATAGACCGCTTCAACTCTACCATCTGCTCCCAGCCCAAAATCCGTCGAGTGGAGAGCTGCCAGTCCATCCTGGCCAAGCTGCTGGTAATATGGCTGGGCTCCATGGTACTGGCGGCACCAGAGCTGCTCCTGTGGCAGCTCAGCCAGGCAGTGTCTCCAGGCACAGGGGCCGTGGTGGACTCCTGCACCATGAACCCCACCTCCAACCTCCCCGAGTCCATCTACGCCCTGGTCATCAACTACCACGAGTACCGCATGTGGTGGTACTTTGGTTGCTACTTCTGCCTGCCCGTGGTCTTCACCCTGCTGTGCCAGTTGGCCACCTGCCACGTGTCCCATGACGGTATCCCCCGGCGCCTGGAGGAAGGTTCCCTCTCCAAGAAGCAGAAGATGCAACACAGTCAACAGGTGGAGCGCCAGCTCAACTGCACCGTGATGGCTCTGGCCGTGGTCTACGGCGTCTGCGCCCTGCCGGAGAACGTGTGCAACATCGTCCTGGCTTACACCGCCATGCCCATCTCTGACGACACCGCCACCCTGCTGGCCCTCATCAACCAGTTCTCCCTGTTCTTCAAGTCGTCGGTGACGCCGGTGCTGCTGCTGTGCCTCTGTAAGTCTCtgagtcaggccttcatggactgctgctgctgctgctgtgagGAGTGCCAACCCAGTGGCTCCCATTCCCCTGGCACCGAGGCCAAACTCAAGAGCACCAACGAGATGTCCTCCTCCATCTTCTTTGACAAAGCCAAGGACAGCTCCACCGTCCTGTCGATCAGCGGGTCCAGCTGAACTGACCTCTCCTGCTTTCTTTCCTTTCCATCGCCTAAACTGGTTAGATGTGGTAACAAAGCAACTCACCTTTCAGCAGTGGACATTCCAACCTCAACCATAGACACACCTTTTTGTTTTCCAGTGCCAGCGTCACCTTCTCTGTAGCCTTAATGTCTGTAATGTCTCTCCTTTTGATGTTCTCTCCAAATAGATACAACACCCCATCCAGTTTTAAGGTGGTTCATTTGACAGGAAGTTCAGACATTGACTAAGTGCAGACTAGGGGGGGctggagagaagaaggagaagagctCCATTTAATATCCTTGTAGAAGTGTCACCCCAATGTGTGTATTTTAAGGATTATTAGGTCAAAAACAAACAGAGTATTATGTTAGATTACTATACTAGGGTTGACTAACAGCCCCAGAGTGTCCCGGCACTGAGATCATTATTTCTTGATGTCACAACTATTAACATATCTGTAATATGATGTGTGTTGGCTCTTTAGTCGACACAGATAAGTTTGCCTTGTCATTTTattcatgccccccccccccccccccccccaattatcGACACAGCTATTTCATCTTTAGCCGTCCCATGTCATTGTATCAATTATTGTTTTGAGTTATATTAATAATCAACAGGGATGGTTTAGACATAGTATTTTCCATCAAATCAAAGTGCTGTGAATAATGCAAAATTATTTTACCAGATAATCATGAGAAGTCACTGTACAGAGGTCAAGGTTATAAACTGGTTATAAGAAGGTTAGGAAAGAAGTCAGACATCATTTTATGAATAAGAGACACAGCTGTAGTTGTGTTTAATTTATCCAATAAAGGTTTGTAATTTATCAGCGCTAGTCATTTTTCTCACGGAGAGATTTCATAAATGTTAGTTTTAAAAAAATTGCTCAACCAGATGAAGGGATTTTGGGTGATTTGTGCTTGATGCGCATCCCATTGACCATCTGAAACTCAATAATGGGGTCCTCTCTCTGACCTGGAACATATTTCTCCTCTCACTGATTCAGGCTTTGGACAGCAGCAGAGCTCCTCTCATAAGGGTGTCATTGTTCTCCAGGGGCCAGTGGAAGCCTCCACTCTGAGGCCCTGGGAGTGGAACTACAGTTGAGTTGCCAGGTTACCGTCCCAAAATTCACGGGTATTGTAGACGGGCCAAAACCGGACAGGCCTTCCATCGTTTTCTCACCCCTGTCTGGTGCTCCAGTCCAAATGAACACGTGGCACTACTGCATGTTCTCTCATGTTGTCGTGAAGGTTTGAAAGAAAtatatgtgttttttttatacTTAAAATGGAGATGGACGTTGGCTTGGGGATGTGAGAAGTTTCCATTGTGATGGACTAGGTTCAATCAGAgaacaccaccacagcacagaCACCAGAATTATGTAATGCGTTGTTTCCAACATACAATGAAACTCAAGCCAACCTGATTGGACAGCATATCAAAAGATCACCAGTAAGCCAATAGAGGGCAAtagtaatggcgtctttttgtaggTATTAACAAGAGGCTAACTTCACCATGGCTTGTTGGCTAAAGCCTATGGGGATCAACACTGTAAATAAGGTCTGAGGAGATCTTATACTGTACGTTTTGCtctatgagataatcttcatcagctaaccAGTGTCCATTTTCAGGTTCCTATGCCTCTGCTGCAGTTAGTTATTTAACTTTAAGTTAGTAATTATTGTAACCCTTACGAAAAAAGATTGTAATTATTTTAACCCTTACGAAAAAAGATTGTAGTTATTTTAACCCTTACGAAAAAAGATTGAAATGATTTTATCCCTTACGAAAAAAAGATTGTAATTATTTCAACCCTTACGAAAAAAGATTGTAATTATTTTAACCCTTACGAAAAAAGATTGTAATTATTTCAACCCTTACGAAAAAAGATTGTAATTATTTTAACCCTTACGAAAAAAGATTGTAATTATTTTAACTCTTATGAAAAAATATTGAAATTATTTTAGCCCTTACGAAAAAAGATTGTAATTATTTTAACCCTTATGAAAAAAGATTGTAATTATTTCAACCCTTACGAAAAAAAGATTGTAATTATTTTAACCCTCACGAAAAAAGATTGTAATTATTTTAACTCTTATGAAAAAAGATTGAAATTATTTTAGCCCTTACGAAAAAAGATTGTAATTATTTTAACCCTTACGAAAAAAGATTGGAATTATTTTAACCCTTACGAAAAAAGATTGGAATTATTTTAACGAAAAAAGATTGCTGCAAATAGCGTGTCCAAAATAACACCTTTTTTTACGAcagtaattttgcagtgtaactgcagtgTAACTGCAGTGTAACTGCAGTGTAACTGCAGTGTAACAGTGCACTGTACTGTAAATGCAGTTCAACTTTTGCAAGGGCACCTTTTGTcaattttgaagcatttatgtaatcaAAACAAGAACATAGAGTGTTCATCATTGATAAAGCTGATCTATTCTGACTGGTATTATCTCATAAAACAAACTGTATAAGATCTCCTAATGCTATGTTAACttcagaccttattttcagcgtacagtggggcaaaaaagtatttagtcttgttttgtctgtcatagttgaagtgtgcctatgatgaagattatacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatatcccaaAACCCCATTCTTTCCTCatttaattttcatcataggactGGCAAACAAACCAGAGGTAGAAAATGCTAACTCATGAATGTTTTTTTACCAATACCCAATTGTGATTAGCTTAGAAGTCAGTTTGAATGTACAGAGACAGTCTGGTTTCTCCATTAAATGATGCACTGATTGAAGGGTTTAGAGACAGAGGAGGTATTTTTTCCCACCGGGGGTGGTTGACCTCtttagagtctctctctctgggtcttgGAGCGTGTTCAGAGGCTGTCAGGGCCTGGGCAGATGGTGCTGGAGCCTCATTAGCAGTGAGCGGAGCTCCTCACCAGCTCCTGTGGACACTAATGACTGAACAGTGAACAGTCGCCTCTCTGTTTCATTAACGAAGCCACCGACACAAATCGACTTCCCCATGCCACAACATCCAGTGTCAGTCCGCTAACATACAAGGACTGAGGGAGTGGGATGGTTTTACGAAGCCCTGCAACAGGTAAACAAATGGAGAGAGTCATTCCAGGATGAAAAGTTGACTACATGATGACGCAGCAAGCTGGCGTTACAAGCAGCAATAGGACAGAAGTTATCAACCGTATGGATCAGATAATGTGCACTCATTTGATTGATACTGTAAGGGCATTTCTAAATGCTTGATGAAACAATGTTTTTGATTAAACTACTTTTTCCTGCA

Function

NR:

description
PREDICTED: prosaposin receptor GPR37L1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04244 GPR37L1, ETBRLP2; prosaposin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564513.2 True 5538 mRNA 0.45 2 68348773 68357169

Neighbor

gene id symbol gene type direction distance location
LOC110492620 NA coding upstream 3760 68301028 ~ 68345013 (+)
LOC110492619 LOC106566466 coding upstream 69484 68275495 ~ 68279289 (+)
LOC110492593 LOC105017353 coding upstream 875080 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 946463 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 1073032 67260049 ~ 67275741 (+)
LOC110492622 LOC100380652 coding downstream 39593 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 64944 68422113 ~ 68431744 (+)
LOC110492628 LOC106566456 coding downstream 547641 68904810 ~ 68909231 (+)
LOC110492629 LOC106566457 coding downstream 555718 68912887 ~ 68915383 (+)
LOC118939574 NA coding downstream 574964 68932133 ~ 68934318 (+)
G1404093 NA non-coding upstream 3166 68345284 ~ 68345607 (+)
G1404096 NA non-coding upstream 22675 68325676 ~ 68326098 (+)
G1404106 NA non-coding upstream 58314 68290151 ~ 68290459 (+)
G1404105 NA non-coding upstream 58687 68289515 ~ 68290086 (+)
G1404098 LOC106566485 non-coding upstream 64177 68281769 ~ 68284596 (+)
G1404153 ptn7 non-coding downstream 14411 68371580 ~ 68373836 (+)
G1404166 NA non-coding downstream 48586 68405755 ~ 68406645 (+)
G1404169 NA non-coding downstream 74944 68432113 ~ 68433787 (+)
G1404168 NA non-coding downstream 77343 68434512 ~ 68443855 (+)
G1404179 NA non-coding downstream 87210 68444379 ~ 68446531 (+)
G1403655 LOC106566486 other upstream 571282 67773293 ~ 67777491 (+)
G1403463 NA other upstream 609071 67738962 ~ 67739702 (+)
G1403412 LOC106566473 other upstream 695326 67653068 ~ 67653447 (+)
G1404281 LOC106566460 other downstream 324277 68681446 ~ 68681977 (+)
G1404700 NA other downstream 752545 69109714 ~ 69113350 (+)
G1404785 NA other downstream 888376 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 948527 69305670 ~ 69312263 (+)
G1404827 NA other downstream 1007352 69364521 ~ 69369376 (+)

Expression


Co-expression Network