LOC110492621 (LOC106566464)


Basic Information

Item Value
gene id LOC110492621
gene name LOC106566464
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68363174 ~ 68367397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567048.2
ACAGGGGGggttccactagttaccacagccacaaagtcagaatggtatttttcgaaaaaattaatgaaaacaaaaatgtgctttttggtgtTAATTTTAGTTTAGACATACGGTTAGCatgtggttaaggttatggttaaggttaggcttaaaATCACACGTTAAGAACATAAATTGTATAAATGggcagggtttatgactttgtggctgtagtaACCAGTGACGACCCTTGTCAGGCAGGAAAAGACAAACAGGGAGGAAGGAGGCGTAGTAAACAAGGCAGATAACTACAACTTACTTAAAAAATAACAGTGCCAATACTTGCGCACAACAGTTTGTTTGGTGAATATTCACGATAGGCACGTTATTCCACCGTTAGTAATACATCCTGTACCCTGTGTTGTCACTGCAAGCTAGATAGTTAGCTAGACAAACTTGTCGCTAGCAGGCTAACAGGCTCCAGTTCCAGTAGCAGTGCCATCACAACGCGCCCAGGATGATCGCATTGATCAACAAGCTCCTTGACTGGTTCAAAGCACTGTTTTGGAAGGAAGAGATGGAGTTAACATTGGTGGGACTCCAGTATTCGGGCAAGACAACTTTCGTTAACGTGATCGCGTCGGGTCAGTTCAGCGAAGACATGATTCCCACAGTGGGCTTCAACATGAGGAAGATCACCAAGGGAAATGTCACCATCAAGCTGTGGGATATCGGCGGTCAGCCTCGATTCAGGAGCATGTGGGAGCGATACTGCAGAGGAGTCAGTGCCATTGTGTACATGGTTGATGCAGCTGACCCAGAGAAGACAGAGGCGTCTAAAAATGAACTACACAACTTGTTGGACAAGCCCCAGCTCCAGGGTATTCCTGTTCTTGTCTTGGGGAATAAGAGGGATCTTCCTGGGGCGCTTGATGAGAAggagctgattgagagaatGAACCTCTCGGCCATCCAAGACAGAGAGATCTGCTGTTACTCCATCTCCTGCAAGGAAAAGGACAACATCGATATCACGCTACAGTGGCTGATCCAGCACTCCAGAACCAAGCGGAGCACTTCATGAGAACCTCATCTCAAGACACAGGCCGTCACCTGTCCCAATTCCCCTGCCCTCTGTCCTCCCCAGCCTGTCCATCCTCCTTTTCTTTGGATGACCCTCTCTTgccaataccccccccccccccccgcctgcagtgttcattttatttttgtaatataaCACTTCTTGTGACCTATGACCTCTGATGGACAAAGTGGTACTTAGCGTCCCTGATGTTCATATGTCATACTTCACCATCTCTGTTGATATCGAGGTTTATATTCAACTGATCCAGAGACAGGTcagagtactgtacagtacataacctcTGTTCCCAATAGGTAGAGAAGACTGGAGTCTGAACACTGCATCACTTAGCAGCTTCAAAGTCAACTTTACCACACTGATATCACATTTCAAACAGTATTTATGtcttagaccagtggttcccaacctttctCTGTTAATGTGCCATCAACTGAATTTTTCTCTGCCCAGAGTACCCCTGATGTACCCCGTGTATATTTTACCAGAAAGCCTATGTTTTCATGGATCTTCAATTACCCCCTGTGggtaggccaggtaccccctgtgggTAGTgtccctggttgggaaccactgtcttTGACCATAGTCCTATTACTTCCCAACGACAGTGGTACTGTGTGTAATGATACTCTATGTACCTTTTGAAGGGGGAGTGTTACAACATTTGATTGAAATACTTGGGAGTTTGCACAagtctctccatttctctttttCTTTATAAGGCTAATGGGAGGTGTTGTTAAAGATGTCCTTGATGTAATCTCTAttgtgattatatatatatatatacatttgcattATGTCATCTTCTCTGTCTGTTGCTTGTCCTGACACACGTTTGGTAGTTTAGAAACAGCAGGAAGATTTTCTTTAAAGTAAGCAACATGGACAATTTTAATTTCCATTAGCCATGTCAATGGGCAAGCATTATCTGCACATTATTTACAaacaaaatatcaatgtttagATTTATGCATCCTTCTTTTCCCATTTCCTGTCATTGATTTATATCATTATGCAATAGCTCCTTTCCACCCAGTAATGTACAGCTACTATTTGACCAGTTTTCATGTCATTACAGGATCATGAATAACCCATTTAGAAATTGAAAATCTGTGATAaagaagtccccccccccccccccagataaaTTGAGATTATACAGGTGTCAGCCAATATAATCTAGGTGTTGGAAATTTCATATTAACTAACGATGAAGGCTTCTGTCTTAATTTTGTATTTAACTTCCATGTCTATGATATATTACCTCCGACATGGCCAATGTAACCATTGACAACCGCAACAACATCTCTGCTTTTTTGTTTGCATGCTGGGGCATAAGTATTTGTGGGATCTTTGAGAATTAActataaaaccttttttttttttatggcaaaTATAGTAAATACTATATCTGCTTTAACCTGTTTGTacattattgtttcaattaagttGATGATTGTGTTTTTAATAGGATATGCTTATGTATGATAACTAAAAACATTGGTGAAAACCACTTTCTACATGGTCTGCAGAATTCATATGATTGTTGCCACACAGGGCTCACAGTGGCTTTAGATTGTTAATGATGGTTGGTGCTTTTCATGTGGTGTCATGTGTATGTTTGTCTGGCTGTTTTCATGTATATGAAAGAATCAATGTGGGAGAAGACGTAGTGTTTTGGTTGTTCTCTAATTAAAGGATCCATGCCACGGCACTCGTCACAACCT

Function

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 8A

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07955 ARL8; ADP-ribosylation factor-like protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567048.2 True 2817 mRNA 0.42 7 68363174 68367397

Neighbor

gene id symbol gene type direction distance location
LOC110492618 LOC106566485 coding downstream 26238 68279354 ~ 68336936 (-)
LOC110492615 LOC106566468 coding downstream 91027 68265437 ~ 68272147 (-)
LOC110492616 LOC106566469 coding downstream 97813 68249045 ~ 68265361 (-)
id1 id1 coding downstream 178755 68183225 ~ 68184419 (-)
LOC110492614 LOC106566471 coding downstream 186963 68170026 ~ 68176211 (-)
LOC110491166 NA coding upstream 2598 68369995 ~ 68383908 (-)
LOC110491167 LOC106566462 coding upstream 76886 68444283 ~ 68620213 (-)
LOC118939573 NA coding upstream 297736 68665133 ~ 68670586 (-)
LOC110492627 LOC106566460 coding upstream 304018 68671413 ~ 68703603 (-)
LOC110492626 LOC106566459 coding upstream 336523 68703920 ~ 68772253 (-)
G1404385 NA non-coding downstream 3522 68359373 ~ 68359652 (-)
G1404348 NA non-coding downstream 27485 68281992 ~ 68335689 (-)
G1404373 NA non-coding downstream 28221 68334541 ~ 68334953 (-)
G1404368 NA non-coding downstream 35271 68327646 ~ 68327903 (-)
G1404367 NA non-coding downstream 37162 68325731 ~ 68326012 (-)
G1404321 NA non-coding upstream 1586 68368983 ~ 68369804 (-)
G1404399 NA non-coding upstream 30722 68398119 ~ 68398401 (-)
G1404418 NA non-coding upstream 66600 68433997 ~ 68434336 (-)
G1404474 NA non-coding upstream 159479 68526876 ~ 68527517 (-)
G1403498 NA other downstream 918995 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 1868507 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 1936852 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 2608564 65715711 ~ 65754610 (-)
G1401617 NA other downstream 2726802 65635482 ~ 65636372 (-)
LOC118939478 LOC106566484 other upstream 423792 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 835889 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 910430 69277827 ~ 69280359 (-)
G1405172 NA other upstream 1150358 69517755 ~ 69518113 (-)
G1405917 NA other upstream 1711260 70078657 ~ 70095541 (-)

Expression


Co-expression Network