LOC118939573


Basic Information

Item Value
gene id LOC118939573
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68665133 ~ 68670586 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036610.1
ggtgaAGATGCCGTTTTAGCTAGCCCTAACCCCATATCATAATTACCCTAATATACTACATCAATTTTCCTAACCTGGTACGAAACAGTATCTCCTGGTCGTAGCTGTATACCGCCGAGTCAAAATCTAAATAGCCATTTTCTACATGTAGGCAGTTTTATTTTGGAGGTAGAACAGTCTGTTCTACAAGCTATAATGAATGAGAGTGATCCAAAATATTTTTCAAGGAGCAGATGCCCCAAAACTCTAACCTTTTTCTGTAAATGACATGACAATTCAATAAGTGGAATCATTTGCCACTGTGTGCCAACCTGCCACGATGGTGCCATTGCTGAGTGTAATTGCCAAACATCGGTCTCTTTCTGTTGTCTGTAGGTAAATGGGATTGGATGAGTGACTCACCTCAACTCCCACCATGTGCGTGTGCTGTCTGCCATCACTCCTAGTTTGGCCCGGGTGGCAGGCTTCACCTGCTCCGCTGTAGGTCGGCAGTTCAGGGGGGTGCTGGACGAGCACCTAGCCATGCTGTACTTTCCGGAGGGGAACAAGGAGCTGGCTGTGAAGGGGGAGGAAGGGCAGCTCTACCACTGGAGCCTACCCTCCTCCTTCCAGCTACTGAAGGATCTGGTGGCAGATGGGAAGGGACTTTTCCATCTTATTCCTTACCTTTGGCTGAGACCTTCCTCGCGTGCTGTCTTCTGTGTCCCGTGCCCTCACCAGAGTGCTcccacccactgttcccccgaccTCCCAGCCCTTAAGgttgGCCAGGAACACCTACACTCCTTCCGGGGAGGAAAGCTTCGGTGCCGGGACCCCTTCGACCAGGAAGTCACAGTACATATTCATAGATGACAACATCCGGCAGAATCATGAGGACATCGTTGCCCATCCaaaaGTGTTCCTGGACTGCGACGGCTCAGAgacctgcatatagcctccacctcACAGCTGTATGACCTACGTCTGGTCCAGAACGACCGTTCGGAGCCATCTCAGACCTAGCGTATTTCAGCCAGCTATGACAGGAACCTCCAGCATGGGGCAGGCTAGAGTGGTGTGTCTGCAGCCTATAGCTCCAGGGTGAGGGCTTGGGTTGGGGGAACTCATTGGGTCTGCAGGTTGAAGGTAACTGCTGTAGTTGCTCAAACTCCTCCTCTAAGTTCAGTGTACTCAGGGTGTGTGATACTGACAACCATTATATTACAAATGTAGAAGACGGctgtttttaaaataaaaacatgtcagAACTAGG

Function

NR:

description
uncharacterized protein LOC109907991

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036610.1 True 1255 mRNA 0.50 3 68665133 68670586

Neighbor

gene id symbol gene type direction distance location
LOC110491167 LOC106566462 coding downstream 44920 68444283 ~ 68620213 (-)
LOC110491166 NA coding downstream 281225 68369995 ~ 68383908 (-)
LOC110492621 LOC106566464 coding downstream 297736 68363174 ~ 68367397 (-)
LOC110492618 LOC106566485 coding downstream 328197 68279354 ~ 68336936 (-)
LOC110492615 LOC106566468 coding downstream 392986 68265437 ~ 68272147 (-)
LOC110492627 LOC106566460 coding upstream 829 68671413 ~ 68703603 (-)
LOC110492626 LOC106566459 coding upstream 33334 68703920 ~ 68772253 (-)
LOC118939478 LOC106566484 coding upstream 120727 68791189 ~ 68795025 (-)
LOC110491168 LOC106566483 coding upstream 224395 68894981 ~ 68896120 (-)
LOC110492630 LOC106566458 coding upstream 244990 68915576 ~ 68917426 (-)
G1404543 NA non-coding downstream 12794 68648270 ~ 68652339 (-)
G1404530 NA non-coding downstream 32356 68632537 ~ 68632777 (-)
G1404529 NA non-coding downstream 32624 68632307 ~ 68632509 (-)
G1404527 NA non-coding downstream 35345 68629579 ~ 68629788 (-)
G1404526 NA non-coding downstream 35801 68629092 ~ 68629332 (-)
G1404588 NA non-coding upstream 118306 68788892 ~ 68789098 (-)
G1404608 NA non-coding upstream 215589 68886175 ~ 68886406 (-)
G1404624 NA non-coding upstream 229778 68900364 ~ 68901492 (-)
G1404634 NA non-coding upstream 234222 68904808 ~ 68907251 (-)
G1403498 NA other downstream 1220954 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 2170466 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 2238811 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 2910523 65715711 ~ 65754610 (-)
G1401617 NA other downstream 3028761 65635482 ~ 65636372 (-)
G1404974 LOC106566438 other upstream 532700 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 607241 69277827 ~ 69280359 (-)
G1405172 NA other upstream 847169 69517755 ~ 69518113 (-)
G1405917 NA other upstream 1408071 70078657 ~ 70095541 (-)

Expression


Co-expression Network