LOC110491168 (LOC106566483)


Basic Information

Item Value
gene id LOC110491168
gene name LOC106566483
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68894981 ~ 68896120 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564517.2
ATGGCTCATAAGTTCATCATGAATTCCACTCAGGTGTTCAACCGCACGGGTCCATGCGTCGCTCATACTTTTGAGAACGGAACGGAAGATGACAACCGCAACTTCGACCTAGGAGGCTGCCTCTTTTTGTTCATAATGCCATTTGATGCAGTCGTGAACGTGCTGGTTTTTGTGTTCTTGATGCTCACAATCCTGTCTTTGGCTGTGAACGGATTCACTTTGTTGGGACTGGGACGCTCGGAGGACCTATCTTGGGAGCCACGCTACGCCCTGCTGAAGAACTTGATTCTGAGTGACATGGTGCAAACCATCAATTTGGGCCCCTTTGTGACCCACTGCTTACTGCAGAGAAGCACAATGAACTTTAACACCATGTGCCTCGTCCAGTATTTCACCGGCAGCGTCTGCATCTTCATCACCCTCATCACCATCACCTGCATGGCCATTGAGCGATACCTGTATGTGTGCCATGCCATCCACTACCTGTCCATCCTCACCCCTCTGCGCCTGCGCCTCACCGTCGGCCTCACCTGGGTCTTGTCTATCAGCGTTGGCTGCGTTAACTTCACCCTGTTACACCAGGGGGAAGGGGAGTACGGCACAGCAACGTCTGGACTCATATGTGAGCCTGACACCGTGGAACGCCACATGGGTTTCCCCAGGGCAGCGGCTATCACCCGCAAGCTGGTGGGCTTCATCTTCACCCTGCTCTGCCTCCTCAGCTACTTATTTGCCTATGTACGGATGTACCAGGACGCCCGCAATGCTGTGGTGCCCTTCAACACGGTGAACACTCGGGCGCGCAACACTGTGCTTTTCTACTGTGGGATGGTGTTCCTGCAGCTACTCCCTATGTTCCTCAAGATCACCTCGGATGCTCTGTGGGAGCTGGAGGGCACAGGGGCCATGATGACCGCCCTCTCCGGGGCTGGGACCTCGCTGTCTGCTGGAACTCTGCACATCTCCCTCCTGATCCTCATCATGGTGCCTCCCTGCATCAACCCACTTATCTTTGGCATTCGCAATTGGGAGGTACGTCAGGCGCTGTTCAGACTCTTCCGCTGGAAGGGCAAACGCCCTGAGCTGGAGCTGGAGAGGACGTGGGTGAGGTCACAGCACAGGGTAGGTGTGTTGGAATGA

Function

NR:

description
olfactory receptor 4F6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564517.2 True 1140 mRNA 0.55 1 68894981 68896120

Neighbor

gene id symbol gene type direction distance location
LOC118939478 LOC106566484 coding downstream 101653 68791189 ~ 68795025 (-)
LOC110492626 LOC106566459 coding downstream 122728 68703920 ~ 68772253 (-)
LOC110492627 LOC106566460 coding downstream 191378 68671413 ~ 68703603 (-)
LOC118939573 NA coding downstream 224395 68665133 ~ 68670586 (-)
LOC110491167 LOC106566462 coding downstream 274768 68444283 ~ 68620213 (-)
LOC110492630 LOC106566458 coding upstream 19456 68915576 ~ 68917426 (-)
LOC110492636 LOC106566437 coding upstream 216896 69113016 ~ 69123466 (-)
LOC110492644 LOC106566447 coding upstream 458382 69354502 ~ 69379181 (-)
LOC110491170 LOC106566448 coding upstream 574296 69470416 ~ 69506016 (-)
LOC118939576 NA coding upstream 675733 69571853 ~ 69575843 (-)
G1404608 NA non-coding downstream 8575 68886175 ~ 68886406 (-)
G1404588 NA non-coding downstream 105883 68788892 ~ 68789098 (-)
G1404543 NA non-coding downstream 242642 68648270 ~ 68652339 (-)
G1404530 NA non-coding downstream 262204 68632537 ~ 68632777 (-)
G1404624 NA non-coding upstream 4244 68900364 ~ 68901492 (-)
G1404634 NA non-coding upstream 8688 68904808 ~ 68907251 (-)
G1404628 LOC106566457 non-coding upstream 17509 68913629 ~ 68915352 (-)
G1404636 NA non-coding upstream 21598 68917718 ~ 68917975 (-)
G1404642 NA non-coding upstream 26739 68922859 ~ 68923213 (-)
G1403498 NA other downstream 1450802 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 2400314 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 2468659 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 3140371 65715711 ~ 65754610 (-)
G1404974 LOC106566438 other upstream 307166 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 381707 69277827 ~ 69280359 (-)
G1405172 NA other upstream 621635 69517755 ~ 69518113 (-)
G1405917 NA other upstream 1182537 70078657 ~ 70095541 (-)
LOC110492660 LOC106566428 other upstream 1323757 70216538 ~ 70221552 (-)

Expression


Co-expression Network