LOC118939574


Basic Information

Item Value
gene id LOC118939574
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68932133 ~ 68934318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947649.1
tccccaAGTCTCCCTGTTTCTCCAGAACCCATACCTGATCGTGGTGGTCTTTCTGATAACCAGCGGTCTGTTCATGTTCACCTTCAAGTCGACACAGTTTAACATGAAGGGCTTCATCATGGTACTGCTGGCATCGTTCATCGGCGGGATCCGGTGGACCCTCACGCAGGTCCTGATACAGAAAGCAGAACTGGGTAAAGTTCCCTCGTTGAGACTGCTGCCCACCGAAAACAGCCCAGACCTGGAACTACCTTCTTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCGTTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCATTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCTTCTTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCACCGAAAACAGCCCAGACCTGGAACTACCGTTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCACCGAAAACAGCCCAGACCTGGAACTACCTTCTTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCATTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCTTCTTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCACCGAAAACAGCCCAGACCTGGAACTACCTTCTTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCATTATTACGTCAGAAGGAAGACGAGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCATTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCATTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACCACCGTTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCACCGAAAACAGCCCAGACCTGGAACTACCATTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCATCGAAAACAGCCCAGACCTGGAACTACCGTTATTACGTCAGAAGGAAGACGAGGGGGAGGAGACTGCTGCCCACCGAAAACAGCCCAGACCTGGAACTACCGTTATTACGTCAGAAGGAAGACGAGGGGGAGCAGACAGCTTCTGAGGACAATGACGAAGAGCAGGAGATTCTACTCTGTCTCAAACAAAATGGTGGACTGACTGTCATGTTCCAGGGAGGCCAGAGGAACAGAAGGGAAGGATTCTTACGCTCTTCTACAGCCAACATTCTCTTCAGGTTTTGTTCAAAACCTATCGTAGAGTTTAACCAGCGGTAAAACGGACAAACACCCTAAACTGTATCAAATGCATATACCGTTGCTGTCAGTGACGTGAAACAGGAGTTTTAACCTTATAGTACGTGAAGTGACCAAACTTCAGGTAACCTTAATAATGATGGAAATGTTTACTAGGAATTAAGGATTACTGatgttcaataaaaaaaaaatttaaatgcacatttttgatttatttaaattACTGAGTTAAAACAAATTGGTTGTAATTTGCACTGTAGGAAAGGGTGTGACTTGAGATTGAATAAACTGTG

Function

NR:

description
PREDICTED: solute carrier family 35 member C2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947649.1 True 1810 mRNA 0.50 2 68932133 68934318

Neighbor

gene id symbol gene type direction distance location
LOC110492629 LOC106566457 coding upstream 16750 68912887 ~ 68915383 (+)
LOC110492628 LOC106566456 coding upstream 22902 68904810 ~ 68909231 (+)
LOC110492623 LOC106566463 coding upstream 500389 68422113 ~ 68431744 (+)
LOC110492622 LOC100380652 coding upstream 526942 68396762 ~ 68405191 (+)
LOC110491164 LOC106566465 coding upstream 574964 68348773 ~ 68357169 (+)
LOC110492631 LOC106566454 coding downstream 23247 68957565 ~ 68961010 (+)
LOC110492632 LOC106566452 coding downstream 27429 68961747 ~ 68970217 (+)
LOC110492634 LOC106566451 coding downstream 39396 68973714 ~ 69006032 (+)
LOC110491169 arfgef2 coding downstream 75183 69009501 ~ 69056918 (+)
LOC110492635 bclx coding downstream 126037 69060355 ~ 69104116 (+)
G1404653 NA non-coding upstream 797 68930578 ~ 68931336 (+)
G1404644 NA non-coding upstream 6890 68925004 ~ 68925243 (+)
G1404640 NA non-coding upstream 8220 68923463 ~ 68923913 (+)
G1404637 NA non-coding upstream 12844 68919050 ~ 68919289 (+)
G1404615 NA non-coding upstream 38306 68893058 ~ 68893827 (+)
G1404662 NA non-coding downstream 3371 68937689 ~ 68937994 (+)
G1404663 NA non-coding downstream 3727 68938045 ~ 68938283 (+)
G1404674 NA non-coding downstream 12815 68947133 ~ 68947365 (+)
G1404685 NA non-coding downstream 17821 68952139 ~ 68952402 (+)
G1404694 NA non-coding downstream 38282 68972600 ~ 68972939 (+)
G1404281 LOC106566460 other upstream 250156 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 588638 68301028 ~ 68345013 (+)
G1404105 NA other upstream 642047 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1154642 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1192431 67738962 ~ 67739702 (+)
G1404700 NA other downstream 175396 69109714 ~ 69113350 (+)
G1404785 NA other downstream 311227 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 371378 69305670 ~ 69312263 (+)
G1404827 NA other downstream 430203 69364521 ~ 69369376 (+)
G1405216 NA other downstream 646411 69580729 ~ 69583626 (+)

Expression


Co-expression Network