Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492631 |
| gene name | LOC106566454 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 68957565 ~ 68961010 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: dolichol-phosphate mannosyltransferase subunit 1-like |
| id | name | namespace |
|---|---|---|
| GO:0035269 | protein O-linked mannosylation | biological_process |
| GO:0006506 | GPI anchor biosynthetic process | biological_process |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0004169 | dolichyl-phosphate-mannose-protein mannosyltransferase activity | molecular_function |
| GO:0004582 | dolichyl-phosphate beta-D-mannosyltransferase activity | molecular_function |
| id | description |
|---|---|
| K00721 | DPM1; dolichol-phosphate mannosyltransferase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021567057.2 | True | 1127 | mRNA | 0.45 | 10 | 68957565 | 68961010 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939574 | NA | coding | upstream | 23247 | 68932133 ~ 68934318 (+) |
| LOC110492629 | LOC106566457 | coding | upstream | 42182 | 68912887 ~ 68915383 (+) |
| LOC110492628 | LOC106566456 | coding | upstream | 48334 | 68904810 ~ 68909231 (+) |
| LOC110492623 | LOC106566463 | coding | upstream | 525821 | 68422113 ~ 68431744 (+) |
| LOC110492622 | LOC100380652 | coding | upstream | 552374 | 68396762 ~ 68405191 (+) |
| LOC110492632 | LOC106566452 | coding | downstream | 737 | 68961747 ~ 68970217 (+) |
| LOC110492634 | LOC106566451 | coding | downstream | 12704 | 68973714 ~ 69006032 (+) |
| LOC110491169 | arfgef2 | coding | downstream | 48491 | 69009501 ~ 69056918 (+) |
| LOC110492635 | bclx | coding | downstream | 99345 | 69060355 ~ 69104116 (+) |
| LOC118939575 | NA | coding | downstream | 163867 | 69124877 ~ 69168201 (+) |
| G1404685 | NA | non-coding | upstream | 5163 | 68952139 ~ 68952402 (+) |
| G1404674 | NA | non-coding | upstream | 10200 | 68947133 ~ 68947365 (+) |
| G1404663 | NA | non-coding | upstream | 19282 | 68938045 ~ 68938283 (+) |
| G1404662 | NA | non-coding | upstream | 19571 | 68937689 ~ 68937994 (+) |
| G1404653 | NA | non-coding | upstream | 26229 | 68930578 ~ 68931336 (+) |
| G1404694 | NA | non-coding | downstream | 11590 | 68972600 ~ 68972939 (+) |
| G1404695 | NA | non-coding | downstream | 12324 | 68973334 ~ 68973593 (+) |
| G1404736 | NA | non-coding | downstream | 109781 | 69070791 ~ 69077789 (+) |
| G1404737 | NA | non-coding | downstream | 112776 | 69073786 ~ 69076041 (+) |
| G1404739 | NA | non-coding | downstream | 115508 | 69076518 ~ 69076984 (+) |
| G1404281 | LOC106566460 | other | upstream | 275588 | 68681446 ~ 68681977 (+) |
| LOC110492620 | NA | other | upstream | 614070 | 68301028 ~ 68345013 (+) |
| G1404105 | NA | other | upstream | 667479 | 68289515 ~ 68290086 (+) |
| G1403655 | LOC106566486 | other | upstream | 1180074 | 67773293 ~ 67777491 (+) |
| G1403463 | NA | other | upstream | 1217863 | 67738962 ~ 67739702 (+) |
| G1404700 | NA | other | downstream | 148704 | 69109714 ~ 69113350 (+) |
| G1404785 | NA | other | downstream | 284535 | 69245545 ~ 69253709 (+) |
| fkbp1ab | LOC100705189 | other | downstream | 344686 | 69305670 ~ 69312263 (+) |
| G1404827 | NA | other | downstream | 403511 | 69364521 ~ 69369376 (+) |
| G1405216 | NA | other | downstream | 619719 | 69580729 ~ 69583626 (+) |
