Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492632 |
| gene name | LOC106566452 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 68961747 ~ 68970217 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| activity-dependent neuroprotector homeobox protein-like |
| id | name | namespace |
|---|---|---|
| GO:0065007 | biological regulation | biological_process |
| GO:0009987 | cellular process | biological_process |
| GO:0003677 | DNA binding | molecular_function |
| id | description |
|---|---|
| K22591 | ADNP; activity-dependent neuroprotector homeobox protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036947652.1 | False | 4413 | mRNA | 0.51 | 4 | 68961747 | 68970217 |
| XM_036947651.1 | True | 4705 | mRNA | 0.51 | 4 | 68962030 | 68970217 |
68,952,000
68,954,000
68,956,000
68,958,000
68,960,000
68,962,000
68,964,000
68,966,000
68,968,000
68,970,000
68,972,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492631 | LOC106566454 | coding | upstream | 737 | 68957565 ~ 68961010 (+) |
| LOC118939574 | NA | coding | upstream | 27429 | 68932133 ~ 68934318 (+) |
| LOC110492629 | LOC106566457 | coding | upstream | 46364 | 68912887 ~ 68915383 (+) |
| LOC110492628 | LOC106566456 | coding | upstream | 52516 | 68904810 ~ 68909231 (+) |
| LOC110492623 | LOC106566463 | coding | upstream | 530003 | 68422113 ~ 68431744 (+) |
| LOC110492634 | LOC106566451 | coding | downstream | 3497 | 68973714 ~ 69006032 (+) |
| LOC110491169 | arfgef2 | coding | downstream | 39284 | 69009501 ~ 69056918 (+) |
| LOC110492635 | bclx | coding | downstream | 90138 | 69060355 ~ 69104116 (+) |
| LOC118939575 | NA | coding | downstream | 154660 | 69124877 ~ 69168201 (+) |
| LOC118939479 | NA | coding | downstream | 199506 | 69169723 ~ 69173281 (+) |
| G1404685 | NA | non-coding | upstream | 9345 | 68952139 ~ 68952402 (+) |
| G1404674 | NA | non-coding | upstream | 14382 | 68947133 ~ 68947365 (+) |
| G1404663 | NA | non-coding | upstream | 23464 | 68938045 ~ 68938283 (+) |
| G1404662 | NA | non-coding | upstream | 23753 | 68937689 ~ 68937994 (+) |
| G1404653 | NA | non-coding | upstream | 30411 | 68930578 ~ 68931336 (+) |
| G1404694 | NA | non-coding | downstream | 2383 | 68972600 ~ 68972939 (+) |
| G1404695 | NA | non-coding | downstream | 3117 | 68973334 ~ 68973593 (+) |
| G1404736 | NA | non-coding | downstream | 100574 | 69070791 ~ 69077789 (+) |
| G1404737 | NA | non-coding | downstream | 103569 | 69073786 ~ 69076041 (+) |
| G1404739 | NA | non-coding | downstream | 106301 | 69076518 ~ 69076984 (+) |
| G1404281 | LOC106566460 | other | upstream | 279770 | 68681446 ~ 68681977 (+) |
| LOC110492620 | NA | other | upstream | 618252 | 68301028 ~ 68345013 (+) |
| G1404105 | NA | other | upstream | 671661 | 68289515 ~ 68290086 (+) |
| G1403655 | LOC106566486 | other | upstream | 1184256 | 67773293 ~ 67777491 (+) |
| G1403463 | NA | other | upstream | 1222045 | 67738962 ~ 67739702 (+) |
| G1404700 | NA | other | downstream | 139497 | 69109714 ~ 69113350 (+) |
| G1404785 | NA | other | downstream | 275328 | 69245545 ~ 69253709 (+) |
| fkbp1ab | LOC100705189 | other | downstream | 335479 | 69305670 ~ 69312263 (+) |
| G1404827 | NA | other | downstream | 394304 | 69364521 ~ 69369376 (+) |
| G1405216 | NA | other | downstream | 610512 | 69580729 ~ 69583626 (+) |
