LOC110492632 (LOC106566452)


Basic Information

Item Value
gene id LOC110492632
gene name LOC106566452
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68961747 ~ 68970217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947652.1
ATGCGTTCATGCCATGCTAAACTAGAGTGCGCCAGCTGTTGGTTAAATCTAGCAAATGCAGCTCGAGCTTGTTTACCCCAGTCCCTCAGGCATAGAAACTACCGACCCCTGACAGACGTTGAAGAACGACCTAGGACAGCATCTGAGGCCTGTCTTGAAAGGTGGGCAGAATGTTCCAGCTCCCGGTCAACAACCTGGGCAGCTTACGGAAAGCCAGGAGAAATGTCAAGCGGGTTCTGGGAGACATTGGCCTGGAGTTTTGTAAAGACCACATTGAGGACTACAAAGACTATGTCCCTGATAATAACGAGTTCTACATCAAGCACACCACCTGGGATGATGTATGTGTGTGGGATCCTTCACTGACCAAATCCCAGGACTACAGATCAAAGCCTTTCTGCTGTTCCGGctgccctttttcctccaaatttTTCTCAGCGTACAAGAGTCACTTCCGCAATGTCCACAGTGAGGACTTCGAGAGCCGCATCCTGCTTAACTGCCCCTACTGCACCTACAATGGGAACAAGAAGACTCTGGAGACGCACATCAAGCTGTTCCACATGCCCAACAACGTGGTTCGCCAGGGCCCCGGGGGCATGCAGGGGGCAGTGGGTGGGCTGAAGGACGCCATGCAGCTGGGCAAGAGGCCCGGCGAGAGCATCGAGCAGGCGGTGTACTACTGCAAGAAGTGCACCTACAGGGACCCGCTTTACAACGTGGTGCGCAAACACATCTACCGAGAACACTTTCAGCATGTGGCCAAGCCCTACCTGGTTAAGCTTGAGGAAAAGGCCACGCCCAACGGTTCCGCAGCAGGTACCACCACGGGCACAGGGAACACAGACCGCAGCAGTAATGCAAACGCCAACAGCAACACCATCCACTGCAAGCGCTGCCTCTTTTTGCCACGCACCTATGAGGCACTGGTGCAGCATGTTATTGAGGACCACGAGCGAATCGGTTACCAGGTGACCGCCATGATTGGTCACACAAACGTGGTGGTACCTCGCGCCAAACCTGTCATCGTGGTATCCCCGAAGACGGGGGAGAAGACTGTCATCGGGGTAGGACCTAAAGGTCAGCTAGTGACCACCACAGTGGGCGGGGTCCGCTCCGTTTCTACCCAGAACCTCAGCAGAATCGTCATCCCAAAGTCAGGCCTGAGCTCAACGGGACTCCTGTCTGGGGTTCACCTGAAGCAAGGGGCATTTGGGTTAAAGAGTGGGACTACCCAATCCTTCTCTATAGGCGGGCAGCAGGTGAGAATCACTTTGCCTGGCAACGCAAAGGTGTCTGTGCCCCAGCATTCTCAAGCAGCCAAACAGAACCTCACTGGTGGTTTGCGGAGCCCCATAGTGGTGAGTTCCTCCTCGTCTACGCTCAACTCCCGGGTCCAGGCGGCTGCCGCCACGGTGGCCTCAGTCACGGCCAAAGGGAAGGGGGGTAACTCTGTCCTGGGCACGTCGTACACACAGAAGTGGAAAATCTGCACCATCTGCAACGAGCTCTTCCCTGAGAATGTGTACAGCTCGCACTTTGAGAAGGAGCACAAGGCGGAGAAAGTACCTGCCGTGGCCAACTACATCATGAAGATCCACAACTTCACCAGCAAGTGTCTGTACTGCAACCGCTACCTGCCCAGCGACACACTCCTCAACCACATGCTGATCCACGGCCTGTCGTGCCCGCACTGCCGCGCCACCTTCAACGACGTGGAGAAGATGGTTTCGCACATGCGACAGTCCCACCCGGACGAGACGGTGGGGCCACGCACCGATTCCCCTCTGACTTTCGACCTCACTCTGCAGCAGGGCAACCCCAAGAACGTCCAGCTGATTGTCACCACCTACAACATGAGAGACGCACCGCAGGAGTCCGTGGCCCTCCATGCCCAGAGTGCCTCGTCGTCCACTCAGACGGGCAAGAGGACCGTGCCCAGCCAACCCCCAAAGATGCCCTCTGATTCAGAAGATGGCTCGCCTGCCAAGAGTGCACCTCAGGCGGCCGTACCGTACAAGAAAGACGTGGGCAAGACTCTGTGCCCGCTGTGCTTCTCCATCCTCAAGGGCCCCATCTCTGATGCACTGGCACACCATCTGAGAGAGAGGCATCAGGTTATCCAAACCGTGCACCCGGTGGAGAAAAAACTCACCTACAAATGTATCCACTGTTTGGGTGTGTACACAAGCAACATGACAGCCTCCACCATCACTCTGCACCTCGTCCACTGCCGCGGTGTGGGGAAGACCCAGAACGGGCAGGAAAGCAGGCCTGCGCCCTCCCCCAGGGTCTCCCAGGCCCAGGGCATTAGCCTCAAACGGGCCGGCTTCGAAAACTGTGACCCAAACGACCCAAAGCGGCGTAAGCTGCCGCCTGGAGAGCTAGAGAGCCCTGCAGCTTTCGTAGAGAATCCAGATGACCCTGTCAACCTGATCCTTGACCCCAAAGGTCACGAGGATGAGTCGTACGAGGCGCGGAAAGCCTTCCTTTCGCAGTACTTCAACCGCGAGCCCTACCCAACGCGTAGGGAGGTGGAAAAACTAGCCTCAAGTCTGTGGTTGTGGAAGTCTGATATCTCCAGCCACTTCACCAACCGCAGGAGGAAATGCACGCGGGACTGTGAGACCCAGAAGGCTGAAGTGTTGCTGGGCTTCAACATGCAGGACATCAGCCAGCTCAGCCACGAACTGACCTTCGACTCTGAGTGCTTGTTTGAGGGCAAAGGAGACCgtggagagacagtggagagGCGGACGTCCAGGATGTGCATCGGACGGTCTGAGCAGGCCATTCAGCGCATGGAGGAGAGGGCTGTGGCTAACGGTGGTGCTACTCCCCAGCTGGGTATTTCAACAGGGTCTGGCAGTGAGGCCAGGGTCACAACCCAGCCCAACTGTGGGGCCAAGAGCGACCAAAACAAGACGATCGGAAGCACCTTAAAACAGAGGGGGCCTAAGTATCTTTCAGAACCCATAGCTATTGACTCAGATAGCAATGAGGATGAAatagatgatgaggaggaggagaaggatgaaACGGGAGCAGTAGAAGTGAATTCCATGGGTAATGACAGGCTGGctgctgggagagagggagaggtggtagGGACAGGGGACCACTCCAGCCCAGACCTAGAGGACATGGAGGaggacatggaggaggaggaggaggaagaagaagagggtcATGTAGAGAATGGATATGGCTCAACGCTGCTGGAAAGGCAGGCTAAAGGGAAGGAAGCTGTTGCCAAACTGGGTCAATCGGGAAGTGGAAAAACTAGGGCCCAACTCGGCAAGCATCAGGTCTGACCAATTGACACAAACAGATGACACGACGCGCACAGAGACGTTACATTTGATCCAACAGCTCTGCCTCACCAGAACTTTAGAGCTAGAAATGGTCAATGGTGTCATGAAGGAGACGAGGTGAGAAGGAGAGCCACTTTCCTTTTCACTTCCACAAGCCATCCAATGATATTTAAACATGTCAAATGTCAAAAGGCCAATTTAAAGCTGCTCTGCAGTCCTAAAGTAGCTGTGAGTGATGTAAGATTTGTGAACAGTTTATATCTTACCTCCAGGGAGGTAAGAGAACCCTGAAATTATTTGCCTTCTATTTACTTTACGAGAAAATTCAGATGAGTACTTATTCTTGTCCATTTGGCGACGAGTTTCACTGTGGCATATAACTTGAGTTATTACCATTTTACTAGCTTTTAAGAGAAACTAGAGAATCCCCCATTTTTTTTTTCGTTGCAGGTATGCAGGAATAGCTTAGTGTATATTTGTACAGTCTTTTAGATCTGTTTGGAGAGAAGTTGCTATAGATGTACTCATTAAATATTTTCTTGTCTTTCTGTGTACCAGCTAGCTGTGTATGTTCTACATTGGTTTGCTAGATGTTGCTTTGGTGACTGGTATTTTCTctgttttgttatttttatttttttaacaaaacCATAGCGTTTTtgctaaataaaatatatatatatatatatatatatatatataaatgcacATTTTAAATGAACATAATTGATTGCTTTTGTTTTTTTTTCGCTGTTTGTTTACTATGATTGATTATACTTTTTTATTTGCAGTAATAACTTTGGTTCTATTGAAGGAGTTCCTCGTATCCTTCTCCCCGTTAGTGGAAGGGCCATTTGGACTGATCTCTGTAGCCCTGTGCTTTGTAGTCTAGACTGTACTTCTCTTCACTCACCTATTCCTTATTTTACCACCGAGAATAGACGTTTGCTGTCGCCTTTGAAACAGAGAGCATTCGCTATTAATATGACGTTTCTGTGTGTATGTTTTAATTTGTGATCttcaatttgatttgttttttgttttttaacttGAGCATCTATGAACAATAAAGTGTTGCGTTGTGCTTCTCCTGGTCCAA
>XM_036947651.1
GCCCTTTCAATTGCGCCATTTTGGATAGGGCAGTTTCCAGGCTGCTAGGGGTGTATTGTCTCTGTAGGAAGAGACGGGAGTGCGTTATCAGTGAACAGTCACAGAGTTAACACATTCTTGGACGAGGGGTTCCTCGTAATATTTACTACAACGCCAGCCACACTATATGTCCCTACAATGGGCGTTCTATGTGTTTTATCTAGCTAACTAAATGAGTTTCAATGGCACTCCATACCCGGTAGCCGAGAAGGATAGTGTGTGTCGGACAGTAGTGAGAGGAGTCGAGCTCCCTCTCTCGGTGTGGTGTGACCGCTTGGAGAGAAGACGGCAAGGCGGTTAACCCCGGCTGCGTATTTGGAGCAATAGGAGTGAACGTGCCTAACGCAttgtctccctgtttctcttgATGTGATATAATTTACTACAACAAGAGAGCACCGGATTTGAGACCAGGTGGGCAGAATGTTCCAGCTCCCGGTCAACAACCTGGGCAGCTTACGGAAAGCCAGGAGAAATGTCAAGCGGGTTCTGGGAGACATTGGCCTGGAGTTTTGTAAAGACCACATTGAGGACTACAAAGACTATGTCCCTGATAATAACGAGTTCTACATCAAGCACACCACCTGGGATGATGTATGTGTGTGGGATCCTTCACTGACCAAATCCCAGGACTACAGATCAAAGCCTTTCTGCTGTTCCGGctgccctttttcctccaaatttTTCTCAGCGTACAAGAGTCACTTCCGCAATGTCCACAGTGAGGACTTCGAGAGCCGCATCCTGCTTAACTGCCCCTACTGCACCTACAATGGGAACAAGAAGACTCTGGAGACGCACATCAAGCTGTTCCACATGCCCAACAACGTGGTTCGCCAGGGCCCCGGGGGCATGCAGGGGGCAGTGGGTGGGCTGAAGGACGCCATGCAGCTGGGCAAGAGGCCCGGCGAGAGCATCGAGCAGGCGGTGTACTACTGCAAGAAGTGCACCTACAGGGACCCGCTTTACAACGTGGTGCGCAAACACATCTACCGAGAACACTTTCAGCATGTGGCCAAGCCCTACCTGGTTAAGCTTGAGGAAAAGGCCACGCCCAACGGTTCCGCAGCAGGTACCACCACGGGCACAGGGAACACAGACCGCAGCAGTAATGCAAACGCCAACAGCAACACCATCCACTGCAAGCGCTGCCTCTTTTTGCCACGCACCTATGAGGCACTGGTGCAGCATGTTATTGAGGACCACGAGCGAATCGGTTACCAGGTGACCGCCATGATTGGTCACACAAACGTGGTGGTACCTCGCGCCAAACCTGTCATCGTGGTATCCCCGAAGACGGGGGAGAAGACTGTCATCGGGGTAGGACCTAAAGGTCAGCTAGTGACCACCACAGTGGGCGGGGTCCGCTCCGTTTCTACCCAGAACCTCAGCAGAATCGTCATCCCAAAGTCAGGCCTGAGCTCAACGGGACTCCTGTCTGGGGTTCACCTGAAGCAAGGGGCATTTGGGTTAAAGAGTGGGACTACCCAATCCTTCTCTATAGGCGGGCAGCAGGTGAGAATCACTTTGCCTGGCAACGCAAAGGTGTCTGTGCCCCAGCATTCTCAAGCAGCCAAACAGAACCTCACTGGTGGTTTGCGGAGCCCCATAGTGGTGAGTTCCTCCTCGTCTACGCTCAACTCCCGGGTCCAGGCGGCTGCCGCCACGGTGGCCTCAGTCACGGCCAAAGGGAAGGGGGGTAACTCTGTCCTGGGCACGTCGTACACACAGAAGTGGAAAATCTGCACCATCTGCAACGAGCTCTTCCCTGAGAATGTGTACAGCTCGCACTTTGAGAAGGAGCACAAGGCGGAGAAAGTACCTGCCGTGGCCAACTACATCATGAAGATCCACAACTTCACCAGCAAGTGTCTGTACTGCAACCGCTACCTGCCCAGCGACACACTCCTCAACCACATGCTGATCCACGGCCTGTCGTGCCCGCACTGCCGCGCCACCTTCAACGACGTGGAGAAGATGGTTTCGCACATGCGACAGTCCCACCCGGACGAGACGGTGGGGCCACGCACCGATTCCCCTCTGACTTTCGACCTCACTCTGCAGCAGGGCAACCCCAAGAACGTCCAGCTGATTGTCACCACCTACAACATGAGAGACGCACCGCAGGAGTCCGTGGCCCTCCATGCCCAGAGTGCCTCGTCGTCCACTCAGACGGGCAAGAGGACCGTGCCCAGCCAACCCCCAAAGATGCCCTCTGATTCAGAAGATGGCTCGCCTGCCAAGAGTGCACCTCAGGCGGCCGTACCGTACAAGAAAGACGTGGGCAAGACTCTGTGCCCGCTGTGCTTCTCCATCCTCAAGGGCCCCATCTCTGATGCACTGGCACACCATCTGAGAGAGAGGCATCAGGTTATCCAAACCGTGCACCCGGTGGAGAAAAAACTCACCTACAAATGTATCCACTGTTTGGGTGTGTACACAAGCAACATGACAGCCTCCACCATCACTCTGCACCTCGTCCACTGCCGCGGTGTGGGGAAGACCCAGAACGGGCAGGAAAGCAGGCCTGCGCCCTCCCCCAGGGTCTCCCAGGCCCAGGGCATTAGCCTCAAACGGGCCGGCTTCGAAAACTGTGACCCAAACGACCCAAAGCGGCGTAAGCTGCCGCCTGGAGAGCTAGAGAGCCCTGCAGCTTTCGTAGAGAATCCAGATGACCCTGTCAACCTGATCCTTGACCCCAAAGGTCACGAGGATGAGTCGTACGAGGCGCGGAAAGCCTTCCTTTCGCAGTACTTCAACCGCGAGCCCTACCCAACGCGTAGGGAGGTGGAAAAACTAGCCTCAAGTCTGTGGTTGTGGAAGTCTGATATCTCCAGCCACTTCACCAACCGCAGGAGGAAATGCACGCGGGACTGTGAGACCCAGAAGGCTGAAGTGTTGCTGGGCTTCAACATGCAGGACATCAGCCAGCTCAGCCACGAACTGACCTTCGACTCTGAGTGCTTGTTTGAGGGCAAAGGAGACCgtggagagacagtggagagGCGGACGTCCAGGATGTGCATCGGACGGTCTGAGCAGGCCATTCAGCGCATGGAGGAGAGGGCTGTGGCTAACGGTGGTGCTACTCCCCAGCTGGGTATTTCAACAGGGTCTGGCAGTGAGGCCAGGGTCACAACCCAGCCCAACTGTGGGGCCAAGAGCGACCAAAACAAGACGATCGGAAGCACCTTAAAACAGAGGGGGCCTAAGTATCTTTCAGAACCCATAGCTATTGACTCAGATAGCAATGAGGATGAAatagatgatgaggaggaggagaaggatgaaACGGGAGCAGTAGAAGTGAATTCCATGGGTAATGACAGGCTGGctgctgggagagagggagaggtggtagGGACAGGGGACCACTCCAGCCCAGACCTAGAGGACATGGAGGaggacatggaggaggaggaggaggaagaagaagagggtcATGTAGAGAATGGATATGGCTCAACGCTGCTGGAAAGGCAGGCTAAAGGGAAGGAAGCTGTTGCCAAACTGGGTCAATCGGGAAGTGGAAAAACTAGGGCCCAACTCGGCAAGCATCAGGTCTGACCAATTGACACAAACAGATGACACGACGCGCACAGAGACGTTACATTTGATCCAACAGCTCTGCCTCACCAGAACTTTAGAGCTAGAAATGGTCAATGGTGTCATGAAGGAGACGAGGTGAGAAGGAGAGCCACTTTCCTTTTCACTTCCACAAGCCATCCAATGATATTTAAACATGTCAAATGTCAAAAGGCCAATTTAAAGCTGCTCTGCAGTCCTAAAGTAGCTGTGAGTGATGTAAGATTTGTGAACAGTTTATATCTTACCTCCAGGGAGGTAAGAGAACCCTGAAATTATTTGCCTTCTATTTACTTTACGAGAAAATTCAGATGAGTACTTATTCTTGTCCATTTGGCGACGAGTTTCACTGTGGCATATAACTTGAGTTATTACCATTTTACTAGCTTTTAAGAGAAACTAGAGAATCCCCCATTTTTTTTTTCGTTGCAGGTATGCAGGAATAGCTTAGTGTATATTTGTACAGTCTTTTAGATCTGTTTGGAGAGAAGTTGCTATAGATGTACTCATTAAATATTTTCTTGTCTTTCTGTGTACCAGCTAGCTGTGTATGTTCTACATTGGTTTGCTAGATGTTGCTTTGGTGACTGGTATTTTCTctgttttgttatttttatttttttaacaaaacCATAGCGTTTTtgctaaataaaatatatatatatatatatatatatatatataaatgcacATTTTAAATGAACATAATTGATTGCTTTTGTTTTTTTTTCGCTGTTTGTTTACTATGATTGATTATACTTTTTTATTTGCAGTAATAACTTTGGTTCTATTGAAGGAGTTCCTCGTATCCTTCTCCCCGTTAGTGGAAGGGCCATTTGGACTGATCTCTGTAGCCCTGTGCTTTGTAGTCTAGACTGTACTTCTCTTCACTCACCTATTCCTTATTTTACCACCGAGAATAGACGTTTGCTGTCGCCTTTGAAACAGAGAGCATTCGCTATTAATATGACGTTTCTGTGTGTATGTTTTAATTTGTGATCttcaatttgatttgttttttgttttttaacttGAGCATCTATGAACAATAAAGTGTTGCGTTGTGCTTCTCCTGGTCCAA

Function

NR:

description
activity-dependent neuroprotector homeobox protein-like

GO:

id name namespace
GO:0065007 biological regulation biological_process
GO:0009987 cellular process biological_process
GO:0003677 DNA binding molecular_function

KEGG:

id description
K22591 ADNP; activity-dependent neuroprotector homeobox protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947652.1 False 4413 mRNA 0.51 4 68961747 68970217
XM_036947651.1 True 4705 mRNA 0.51 4 68962030 68970217

Neighbor

gene id symbol gene type direction distance location
LOC110492631 LOC106566454 coding upstream 737 68957565 ~ 68961010 (+)
LOC118939574 NA coding upstream 27429 68932133 ~ 68934318 (+)
LOC110492629 LOC106566457 coding upstream 46364 68912887 ~ 68915383 (+)
LOC110492628 LOC106566456 coding upstream 52516 68904810 ~ 68909231 (+)
LOC110492623 LOC106566463 coding upstream 530003 68422113 ~ 68431744 (+)
LOC110492634 LOC106566451 coding downstream 3497 68973714 ~ 69006032 (+)
LOC110491169 arfgef2 coding downstream 39284 69009501 ~ 69056918 (+)
LOC110492635 bclx coding downstream 90138 69060355 ~ 69104116 (+)
LOC118939575 NA coding downstream 154660 69124877 ~ 69168201 (+)
LOC118939479 NA coding downstream 199506 69169723 ~ 69173281 (+)
G1404685 NA non-coding upstream 9345 68952139 ~ 68952402 (+)
G1404674 NA non-coding upstream 14382 68947133 ~ 68947365 (+)
G1404663 NA non-coding upstream 23464 68938045 ~ 68938283 (+)
G1404662 NA non-coding upstream 23753 68937689 ~ 68937994 (+)
G1404653 NA non-coding upstream 30411 68930578 ~ 68931336 (+)
G1404694 NA non-coding downstream 2383 68972600 ~ 68972939 (+)
G1404695 NA non-coding downstream 3117 68973334 ~ 68973593 (+)
G1404736 NA non-coding downstream 100574 69070791 ~ 69077789 (+)
G1404737 NA non-coding downstream 103569 69073786 ~ 69076041 (+)
G1404739 NA non-coding downstream 106301 69076518 ~ 69076984 (+)
G1404281 LOC106566460 other upstream 279770 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 618252 68301028 ~ 68345013 (+)
G1404105 NA other upstream 671661 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1184256 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1222045 67738962 ~ 67739702 (+)
G1404700 NA other downstream 139497 69109714 ~ 69113350 (+)
G1404785 NA other downstream 275328 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 335479 69305670 ~ 69312263 (+)
G1404827 NA other downstream 394304 69364521 ~ 69369376 (+)
G1405216 NA other downstream 610512 69580729 ~ 69583626 (+)

Expression


Co-expression Network